BGIOSGA011745

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Revision as of 09:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011745| Description = BGIOSGA011745| Definition = Oryza sativa Indica Group BGIOSGA011745, complete gene.| tag = | tid = BGIOSGA011745-TA|...")
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Gene Name

BGIOSGA011745

Description

BGIOSGA011745

Definition

Oryza sativa Indica Group BGIOSGA011745, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA011745-TA

Ensembl Protein ID

BGIOSGA011745-PA

Length

4375

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1542478..1546852

Sequence Coding Region

1542478..1542669,1544072..1544347,1544557..1544679,1544760..1544864,1545266..1545445
,1545566..1545628,1545729..1545923,1546282..1546383,1546463..1546525
,1546623..1546691,1546793..1546852

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1542478..1546852 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1542478..1546852 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATGGAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCGCCCACGCCGGCCTCGCGGACGAGTCCCATATCAAATACAATTATTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCCGTGGGCTCACCCGCCACCGGCAACATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAACGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAGATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTATGGAATGCATGCAGCAGCAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAATGTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGCAAAGTTCAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGGATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAGAGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCATAAATCGGAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTGTCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MDHHHHHLPPPPPRSPMENSASSKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTPASRTSPISNTIILXXXXXXXXXXXXXXXXXXSSSSSAGASPVGSPATGNIFRFKAEVPRNAKRALFSDGDDEGVLFPGVFTTRGTGPRKIPRSPYKVLDAPALQDDFYLNLVDWSSHNILAVGLGNCVYLWNACSSKVTKLCDLGVDDNVCSVGWAQRGTHLAVGTNQGKVQVWDATRCKRIRTMESHRMRVGALAWNSSLLSSGSRDKSILHHDIRAQDDYISRLAGHKSEVCGLKWSYDNRQLASGGNDNRLYVWNQHSAHPVLKYTEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNMHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQSSDSLSSIGATSFVRSYIR</aaseq>

Gene Sequence

<dnaseqindica>1..192#1595..1870#2080..2202#2283..2387#2789..2968#3089..3151#3252..3446#3805..3906#3986..4048#4146..4214#4316..4375#ATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATGGAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCGCCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCCAACCTCGCGCTCTTCGACCTCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTAGGCTGATCAGATCGGTATATTCCATGCCCTCTTTTTTTTTCTCTGCTAATTCCATCTATGCTATGCTTTGGTTTCATGCATTTCAAATCCCCCCTTTGCACTCTCAGATTCAACTTTTATTTTCAAAGATAAAACATATATCTAACGCCACTTAATTGAAGAGAAAAGGTAATGAATTTGAACTCATTTGCTTCTTATATATATCCTCGTTCATTGACTTGATCGAGTACTATTTTAGATGAGCTTCTGAACATGAACTTAATTTGTGCATTCTATCTCTTCGTATTGTGGCATTTTTCTTCTACAAACCTCCAATAATCTTTTACGTCTCTCTATGAAAATCATAATGACATCAAACTTATTGACATTTTATCTTATCTATATATTAATTGAATGGGCAAGGAATTGAATTCTTGTTCATCTTCTGCGAAAGACTCTGGGTGAGGACTTAATTCACATCCACGTACTATAATCCTTATAGTTACTGGTACTGAAAAGTATATTTTTGGTAAGCATAGCAACATCTATGTCTGTAGACATATTTAATTTTTTTCTATGCACATATGTCTCAGTAATTTTTCATTATTTATTTATTTTTGTCTGGCATCATATGTCCCGGTTGTAACGTAGAACCAACACATATGAGCCTACTAGAGAGCTAGCATCGCCATGCTATATATATGCATGCTGGTTTCTGCGAATAACTGCCACATATATATATGAGCATGCCAACGCATCACAACTACCCCTCGTATGTGCCAGTTGTTCGAGGAAACCAGCACATATGATGCTGGTGAATCGATCCTATAGTGTGGATTATATATATGTGACAGTTCTTAGATATAACCGACACCGATGACCTAGATCATCGTGTCGGTTGCAGGGGCTGCCAAACCAGCAGATTCTGTACTAGTGCTATTGTATCATCATTAATAGAGGTAAAAAAAAAGCTCACTATGAAACCTAGAAATCTCATATTAATCAAAGAAAAAGAGAATGATTTACACTATCAGATCATGATGGTTACATATTATAACATTATAGATTGAACTGCATAGTTTATATAGAATATAATTTATTTGTACCTTCAAATTCTATTATAAACAAGCTACAATTGTATATATATGTGGAAATATAAGTTAAGATCATGATTTACACTATGAGATCATGATGGTTACATATTATAACATTGTAGATTGAACATATAGAATACAATTGTTTTCCACCTTCAAATTCTATTATAAACAAATTACAATTGTATATTTGGAAATCTAAGTTAAGAGTCCCATATCAAATACAATTATTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCCGTGGGCTCACCCGCCACCGGCAACATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAACGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAGATCCCTAGGTCACCTTATAAGGTGAGAAGTGTTCGCCTTCGATTTCATAGTTTCTTTCAATTGATATGGTCTGTTTCTTGATTGATGTTTCTTTGAATTGAGAAAAACATGGTCTTTATTATTCATCTGCTCTGTACCAAGAATCCTGTGTTATTTGTCATGCATAAAGAGACTGATATGAAAGCTTATTACTCAAAATCTCACATGAATTTTCCTTCTGTTGCTCTTAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTATGGAATGCATGCAGCAGCAAGGTGAGCCAACTGCGGCCATCCATGCGCATTCTTGTTTGGGTACTTGAAGAGGGTTTGTAAAGAAGTTTATTGCTGTGCAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAATGTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGCAAAGTTCAGGTTAGACGTATGCCCCTTTCTGAAATGATCAGATAACATAGTCATGATCCACCAAAATTTGGAACGATGCCTTAGCTTAATCTTTATCTAGAGTGTCAATGGAAACATTGAGAAGTATACAACTCACTTATGGAAAGATCAGAAAAATTGCAATACTATTAACAGTGGACCTAATTTTTCGCACAAATAATATATGATAGACGCAGTAGAGTTTTATGACTAAACTGAATGACTTTCATTTTTACTCCAAAGAATGAATTTGGTCCATTGTAATCTCTGTTTACAAATGTGCTGTAGTATTTGATGATTATCGATTAATCCTGTTGAGCTCTGAAATTGGTATGCAATGCTACAATTTCAATTTGGTGTCTGACTGTCACCTTGGATTTTATCTTATTTAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGGATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAGAGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCATAAATCGGAGGTGATCTATTTTATACATCATTATGAATTTTCTGACATGTCAGATTCTTGGATTATCCTATTGTGCTCCCTTTTGATATATTCTTATAATATGCATATTCTGTTTCCAAACACCTTTCAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGAGTAAGAATGCATCCATGAATTGTTTCTTGATTGGATCATTGGTATTACATGGAATTCAAGGTTGCAATTTCTTATGTCCATATCAATGTCTCTTTTCCAGCTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTGTCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTATTTTGCTACACATCTAATTTCTTTAGTGATTGTGCAGCCCATGTTTATAGTTCTGAACTTTAATGAACTCTTGTTTATTCTATTTATAGTACCATATTAAATACCGTGGTATATGGTATGTGAAATAAGCATGATAACTCTCAATCTTTGGACGCACTTAAAAAATTGAACATTTCTTTAGTCATGTCAGTTCCGAAAAGTAAGAAATGTAGGCTGAGCTCTATTTTCAATAGTGAAGTTCTATTTCTTGTTTTCATATCTGAAACCTTCACAGAAATGCCATGTCATTAAGACTGTAGAGTTAAGCATATTGTTTTTTGGTATGTACTGAGGACGCTAAGTGAATCTTGAATAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGGTATGCTTGCAAGCTTATTCTTAACTCAGTACGCTTTACCTTTTTCTTGTATTAATTGTGCTCGATTTCTCCTTTGTAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGGTGAAGTTATCTCTTGAGTCTTTGAATCTACTGAATTCTGTTTATTGTATCTAGAATATTTTGGCATAGCTGTGTTTTTGACATTTTATGTCAACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGGTACCTTTTTTAAAAATAGTATAATTGGTCCTTATTTCAATTTGAATGAAATTTCACTTTCATATATAGCTTCTAAATAATAATTGGTCCTTCAATTACAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011745

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011745&oldid=56568"