BGIOSGA011765

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Revision as of 09:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011765| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011765, complete gene.| tag = CDPK12|...")
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Gene Name

BGIOSGA011765

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011765, complete gene.

LocusTag

CDPK12

Ensembl Transcript ID

BGIOSGA011765-TA

Ensembl Protein ID

BGIOSGA011765-PA

Length

3140

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1849923..1853062

Sequence Coding Region

1849923..1850622,1850911..1851054,1851141..1851293,1851466..1851581,1851966..1852133
,1852219..1852443,1852940..1853062

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1849923..1853062 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1849923..1853062 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAATCAGTGCCAGAACGGGACTCTTGGGAGTGATTACCACAATCGGTTCCCAAGGGAGCATGCCGTTGGGTACGTTCAGGGGGATAGCTACTTGGACTTGAAGAAGTTCGATGATACTTGGCCTGAGGTGAACAACTTCAAGCCTACTGCTGCTAGTATTCTCAGGCGGGGGTTGGATCCTACATCTATCAATGTCCTTGGGCGGAAGACAGCGGACCTAAGGGAGCATTATATCATTGGTCGGAAGCTTGGTCAGGGCCAGTTTGGCACAACTTACCTCTGTACCGAGATCAATACAGGGTGTGAGTATGCTTGCAAGACCATCCCAAAGCGCAAGCTCATCACCAAGGAGGATGTAGAAGATGTGCGCCGTGAGATTCAGATAATGCACCATTTGTCGGGCCACAAGAATGTTGTTGCAATCAAGGATGTCTATGAGGATGGGCAAGCGGTGCACATTGTGATGGAGCTCTGCGCTGGTGGGGAGCTCTTTGACAGGATTCAGGAGAAGGGGCATTACAGCGAGCGGAAGGCTGCAGAGCTTATAAGAATAATTGTCAGCATTGTGGCTATGTGCCATTCGCTCGGGGTGATGCACCGTGATCTTAAGCCAGAAAATTTCCTCCTTTTGGATAAAGATGATGATCTGTCAATAAAGGCAATAGATTTTGGTCTATCCGTGTTCTTCAAACCAGGTCAGGTTTTCACTGAGCTGGTTGGGAGTCCATATTATGTTGCTCCTGAGGTATTGCACAAACGTTATGGACCAGAATCTGATGTGTGGTCAGCTGGAGTGATACTTTACGTTTTGCTGAGTGGAGTGCCACCATTTTGGGCAGAGACACAACAAGGAATATTTGATGCAGTTCTGAAGGGTCACATTGATTTTCAATCTGATCCATGGCCAAAGATATCTGACAGTGCAAAGGATCTTATAAGAAAAATGCTCTCTCATTGCCCTTCGGAGCGTTTGAAGGCCCATGAAGTGCTAAGGCATCCTTGGATCTGTGAAAATGGAGTTGCCACTGATCAAGCTCTGGATCCCAGTGTTATCTCTCGGCTCAAACAATTCTCTGCAATGAACAAGTTAAAGAAGTTGGCTCTGAGAGTGATAGCCGAGCGTCTTTCAGAGGAGGAGATTGCTGGGTTAAGAGAAATGTTCAAGGCAGTGGACACAAAAAATAGAGGTGTAATCACTTTCGGTGAGCTTAGAGAAGGTTTAAGAAGATTTGGCGCTGAATTTAAGGATACAGAGATTGGTGATATAATGGAAGCGGCACACAACGACAATAATGTAACAATCCATTATGAAGAATTTATTGCTGCAACTCTACCTCTTAACAAGATAGAACGTGAGGAGCACCTGCTGGCAGCTTTTACATATTTTGACAAAGATGGGAGTGGTTATATCACAATTGACAAGCTTCAACGAGCTTGTGGAGAACATAACATGGAGGATTCACTCCTTGAAGAGATTATTTCAGAGGTTGATCAAAACAATGACGGCCAAATTGACTACGCCGAATTTGTAGCCATGATGCAAGGCAGCAACGTTGGACTAGGGTGGCAAACAATGGAAAGCAGTTTGAATGTAGCATTAAGAGACGCACCTCAAGTACATTGA</cdnaseq>

Protein Sequence

<aaseq>MGNQCQNGTLGSDYHNRFPREHAVGYVQGDSYLDLKKFDDTWPEVNNFKPTAASILRRGLDPTSINVLGRKTADLREHYIIGRKLGQGQFGTTYLCTEINTGCEYACKTIPKRKLITKEDVEDVRREIQIMHHLSGHKNVVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGVMHRDLKPENFLLLDKDDDLSIKAIDFGLSVFFKPGQVFTELVGSPYYVAPEVLHKRYGPESDVWSAGVILYVLLSGVPPFWAETQQGIFDAVLKGHIDFQSDPWPKISDSAKDLIRKMLSHCPSERLKAHEVLRHPWICENGVATDQALDPSVISRLKQFSAMNKLKKLALRVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFIAATLPLNKIEREEHLLAAFTYFDKDGSGYITIDKLQRACGEHNMEDSLLEEIISEVDQNNDGQIDYAEFVAMMQGSNVGLGWQTMESSLNVALRDAPQVH</aaseq>

Gene Sequence

<dnaseqindica>1..700#989..1132#1219..1371#1544..1659#2044..2211#2297..2521#3018..3140#ATGGGGAATCAGTGCCAGAACGGGACTCTTGGGAGTGATTACCACAATCGGTTCCCAAGGGAGCATGCCGTTGGGTACGTTCAGGGGGATAGCTACTTGGACTTGAAGAAGTTCGATGATACTTGGCCTGAGGTGAACAACTTCAAGCCTACTGCTGCTAGTATTCTCAGGCGGGGGTTGGATCCTACATCTATCAATGTCCTTGGGCGGAAGACAGCGGACCTAAGGGAGCATTATATCATTGGTCGGAAGCTTGGTCAGGGCCAGTTTGGCACAACTTACCTCTGTACCGAGATCAATACAGGGTGTGAGTATGCTTGCAAGACCATCCCAAAGCGCAAGCTCATCACCAAGGAGGATGTAGAAGATGTGCGCCGTGAGATTCAGATAATGCACCATTTGTCGGGCCACAAGAATGTTGTTGCAATCAAGGATGTCTATGAGGATGGGCAAGCGGTGCACATTGTGATGGAGCTCTGCGCTGGTGGGGAGCTCTTTGACAGGATTCAGGAGAAGGGGCATTACAGCGAGCGGAAGGCTGCAGAGCTTATAAGAATAATTGTCAGCATTGTGGCTATGTGCCATTCGCTCGGGGTGATGCACCGTGATCTTAAGCCAGAAAATTTCCTCCTTTTGGATAAAGATGATGATCTGTCAATAAAGGCAATAGATTTTGGTCTATCCGTGTTCTTCAAACCAGGTATATGTCGCATTTTAATGCACTTGTAGTGGTTTATTTTTATTTTTAGAGAGTAACATATCAACACATAACGTGTATATGTCTGCTTTGCTGTATATTCTGTGGATATTATTTGCATGCCACCAGAATCAAGACCATCCTAACTATATTCTGTTGTTTATCCATCTTATTCATCTTCCTTAATAGTTCTTGCAATTTATATGCCAGCTCATGTGTGAAGTGTTGTGGATTTACAAAATAGTTTTTGACTTCTATCTTTACTTAAATTTGGTGTTTTAAAATTTGCAGGTCAGGTTTTCACTGAGCTGGTTGGGAGTCCATATTATGTTGCTCCTGAGGTATTGCACAAACGTTATGGACCAGAATCTGATGTGTGGTCAGCTGGAGTGATACTTTACGTTTTGCTGAGTGGAGTGCCACCATTTTGGGCAGGTGGGTTATCTAAATTCTCAGGTGTTAAATTTGAATCTAATATCTTTCTGGAATTGCAAAGCTGATCACATCCTATCCTTTTCCAGAGACACAACAAGGAATATTTGATGCAGTTCTGAAGGGTCACATTGATTTTCAATCTGATCCATGGCCAAAGATATCTGACAGTGCAAAGGATCTTATAAGAAAAATGCTCTCTCATTGCCCTTCGGAGCGTTTGAAGGCCCATGAAGTGCTAAGTAAGTATATTTGACCTATTTCTTCACATAAATTAGTTGCCCTTTTGTTTCATCGCGAATAGCTCTGCATTTTGTTCATGACATAGTTTGACGCATGGTTTTAGTTTTCACTAATTATCTAAGAGCTACAAACCTTTTGATATGTTGACTGATATATATATCTTATTGTCAGGGCATCCTTGGATCTGTGAAAATGGAGTTGCCACTGATCAAGCTCTGGATCCCAGTGTTATCTCTCGGCTCAAACAATTCTCTGCAATGAACAAGTTAAAGAAGTTGGCTCTGAGAGTGAGTGCTTCATATTCTTGCATGCTTCCGTATTGCTGCTATGATATTTGCTATCATATCATCTTAATCGAGTATCCCCAATTGGCCTTCAGCCCTTCACTATATCCATTCGCATGCCATGCCATATTGTCATTCTTTGGATACCTATGATAGTAAAATAAGTTATTTTTTGGTAAATGTCAACTTTGGGAGCTGCTCTAGGCTGATCATCTGATTTTGTGGCAATATGGAAAACAAGTTTTTAGGTTGCGATATTCAATTATGTGGTATGCACATTAACATGCCACAATTCAGCCTGTAGCACTATTTCGTTGCATGTCCTACTGCTGGCTACATCTGTGAACCATACGCCATTTCTTTTTTCTGACACTTACGTGCTTCCAGGTGATAGCCGAGCGTCTTTCAGAGGAGGAGATTGCTGGGTTAAGAGAAATGTTCAAGGCAGTGGACACAAAAAATAGAGGTGTAATCACTTTCGGTGAGCTTAGAGAAGGTTTAAGAAGATTTGGCGCTGAATTTAAGGATACAGAGATTGGTGATATAATGGAAGCGGTAAGTAGGTGTAAGACCACAAATTGTTGGTTAGATGGTGCTCTCTTTCTTTGAGATCTTGATTTAAACTCTGAAACTTCTTCAGGCACACAACGACAATAATGTAACAATCCATTATGAAGAATTTATTGCTGCAACTCTACCTCTTAACAAGATAGAACGTGAGGAGCACCTGCTGGCAGCTTTTACATATTTTGACAAAGATGGGAGTGGTTATATCACAATTGACAAGCTTCAACGAGCTTGTGGAGAACATAACATGGAGGATTCACTCCTTGAAGAGATTATTTCAGAGGTTGATCAAAACAATGTAAGTTGATTTCACTATACAATATCCAAGATTTATTTTTTAGTGACTATTGACTTGTAACCACCGTATTGAGAATAATTTCAGCATAACACTCTGCGCTTTAAACGAAAGCATACACTCTTGGACATGTTAGGATTTTTTTAGACTTTTAGTGTCTCTGCTGGTCAGCTGGTACATCGGTAGATTGCGTTGTAGTCTTTAATCCTAATGACATTCCCTGTAAAATTATTTATTTGATTTTACTGGCATCTGTCAGCGTCACATCTAACACCAAACTTGTTCAACAACAGAACGATAACATGTACACGGTTGAGGGCAGTCTCTTCTACAGATCCATTTGTCTTGGGTCCTCATGCTTTAGAACTTAGCATTAGCATGTTTTTTTTTCCAGGGATAGTATTTCAAAAGAAAAAAGAAGGCGATGATTTTGATTCGTCAACCCTGAAAATCTTTCTCGAGTTGAATCTAATGAACTGGTCTTGTCATTCTTTTTCAGGACGGCCAAATTGACTACGCCGAATTTGTAGCCATGATGCAAGGCAGCAACGTTGGACTAGGGTGGCAAACAATGGAAAGCAGTTTGAATGTAGCATTAAGAGACGCACCTCAAGTACATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011765

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011765&oldid=56588"