BGIOSGA011773

From RiceWiki
Revision as of 09:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011773| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011773, complete gene.| tag = OsI_098...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011773

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011773, complete gene.

LocusTag

OsI_09853

Ensembl Transcript ID

BGIOSGA011773-TA

Ensembl Protein ID

BGIOSGA011773-PA

Length

5400

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1982689..1988088

Sequence Coding Region

1982689..1982718,1982970..1983057,1983152..1983239,1983350..1983395,1983509..1983607
,1985184..1985252,1986530..1986827,1986986..1987119,1987263..1987682
,1987795..1988088

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1982689..1988088 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1982689..1988088 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCCGGGTCTAGGGATCTTGACCCTGATGATGAGGCGCCCGCGGCCGCCGAGGTGGTGAAGGTGGAGGTGGAGGAGAAGAAGAAGAAGGTCTCGTCGAAAGCGACCGGGAAAGGGGACGCTGCGTCGGATGGCGGGCCCACTACGGGGACTCCCCTCCCGGACAAAAAGTTGCTTCTCTTCATCCTCGACAGGCTCCAGAAGAAGGACACCTATGGAGTTTTCTCGGAGCCCGTCGACCATGAGGAGCTTCCAGATTACCATGAGATTATCGAGCATCCTATGGACTTCTCGACGATCCGCGAGAAGCTGTTGAATGACTCGTATACCACCCTAGAGCAGTTTGAGAATGATGTGTTTCTACTTACATCAAATGCCATGTCCTACAATTCAGACGACACAGTCTACTATCGGCAGGCACGATCTATTGAAGCTCTGGCCAAAAAGGATTTCGAGAACCTGAGGCAAGCTAGTGAGCCTGAAGAAGAACAACAACCCAAGACTGTACCCAGAAGAGGCAGACCACCAAAATATGCAAAGAAAATTGAGAAGACTGAAAATGATGTTTCACCAGATTTATCCAATGCAAAAACAAAATCTGCAGACCATGCTGAAACAATTAGAAAAAGGTTGACTGGGGACAGAACTCGAAATGCAAATATCACAACAAGAGACTCACCCTTTCTTCAACATAATACACCTGGTTCTTTTGCTGGGCCTTCGAAGTACGGAAAGAAGACCACCCCGACTATTTCAGATGATGAGCGTCGTAGTACATACGATCAGCAATACTTCCATAGTAGTCCTCTGTTTTCTGCCCTTGATGGTGAGAGGAAAGTACTTGTGCCGGTGGGACTTCAACAGCAACATGCATATGCTAGGAGCTTGGCGCGGTTTGCTGCAAAATTTGGTCCCGTAGGCTGGGAAATAGCAGCAAAGAGAATCAGACGACTACTGCCTTCTGGAACAAATTTTGGCCCAGGATGGGTTGTGGATGGTGAGCCACCTGAGAACTCTCAGTGGCCTCGAGTTCCCATGCTCTCTGATCCATCCATCCAGTCTACTGGTGTTCCAGCTAGCAACGTAATATCCAAGAATGATGAATCCAATCAGAAGTCTGGACTGACTTCGAACGAGGATTCTGGTGAAGAGCATCTAGCTAGAACCGAGCCAGTGGCTTCTACATCTGCATGCGTTAACACAAACTCTGTATCTGCCACCAAGCTAGCTACCAAGTGTGAAAACGGGGCTAATGTGTCATGTGATGGTTTGACACATGCTCAAGTTCTTGGGATGTTTTCCGGAGTCAATGGCAGAACAAATGGCTTTATCCATGGGCACCCACTGGTGGCTAATAGCATTAAAGCACCACACAATGGGGATGTTGGAAAGGTAGCCACTAATCCATCACCAGATGCAGGTCATGATTCAGAAGCTGCATTATCACAAACCATGACTAGTTCTGCTCCAAGTTTAAGTGCTGGTGTTCAACCATCAGGTTCCATGCCAAGCGGAAAGTTAGCAAATCCAAAAAAGCACCCGGACTTGGCATTGCAGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MESGSRDLDPDDEAPAAAEVVKVEVEEKKKKVSSKATGKGDAASDGGPTTGTPLPDKKLLLFILDRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQASEPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTKSADHAETIRKRLTGDRTRNANITTRDSPFLQHNTPGSFAGPSKYGKKTTPTISDDERRSTYDQQYFHSSPLFSALDGERKVLVPVGLQQQHAYARSLARFAAKFGPVGWEIAAKRIRRLLPSGTNFGPGWVVDGEPPENSQWPRVPMLSDPSIQSTGVPASNVISKNDESNQKSGLTSNEDSGEEHLARTEPVASTSACVNTNSVSATKLATKCENGANVSCDGLTHAQVLGMFSGVNGRTNGFIHGHPLVANSIKAPHNGDVGKVATNPSPDAGHDSEAALSQTMTSSAPSLSAGVQPSGSMPSGKLANPKKHPDLALQL</aaseq>

Gene Sequence

<dnaseqindica>1..30#282..369#464..551#662..707#821..919#2496..2564#3842..4139#4298..4431#4575..4994#5107..5400#ATGGAGTCCGGGTCTAGGGATCTTGACCCTGTCAGCGCTTTAATCCTTTCCATCGAAGGGAACAGTACGCGGATCTGACAAGTTTTGACGGATTTGACCTTTTTCCTCCCGGATTATTGTGTTGCAAGCGCTGTCCGGGGTTGAAAAAGCGCCAAAAGTCTTCGTTTTTTGTGTGCCAAGTCTGGAGTTTTGCAGCAATTCGCCCTGGCAGTCGCAAAAGGCTGACGTTCCTCCGTTTCCATGGCGAATTCGACTCTGACGGCTGCTGTTCGATGCTGCAGGATGATGAGGCGCCCGCGGCCGCCGAGGTGGTGAAGGTGGAGGTGGAGGAGAAGAAGAAGAAGGTCTCGTCGAAAGCGACCGGGAAAGGTGAGGCTTGGAGGGAAGCCAAGCATTAGTGTTGAAGTGGTTAAAGAATTTGAAATTTTCTCGGGTTAACGCCTCCTTGCGCTTGTGGGAGCAGGGGACGCTGCGTCGGATGGCGGGCCCACTACGGGGACTCCCCTCCCGGACAAAAAGTTGCTTCTCTTCATCCTCGACAGGCTCCAGAAGTGAGTGGCCCGGCCCCATCCTGATGTAGTTCTCTTCTCCCCCCAATAAGAGCTTGCCTCTGATTGCTTCAGCTATGTATGTGTGTATCTCTTCTTTGTACTGCTCCCAGGAAGGACACCTATGGAGTTTTCTCGGAGCCCGTCGACCATGAGGAGGTGAGCAATTCAGTTCTTGGTCTGCTGTGTATTTGTGTTCTGAAGTTTGGAGTGATGATGTTGACAACTGTTTTGTGTTTTGTGTATCTGTTGTTGTGCGTGCTTGCATGCAGCTTCCAGATTACCATGAGATTATCGAGCATCCTATGGACTTCTCGACGATCCGCGAGAAGCTGTTGAATGACTCGTATACCACCCTAGAGCAGTTTGAGGTATGATGCCTGTAGTTTGAGTTGCTGTCTCCTTGCGTGTTGTCTGTTTTATTGGCTTTTCATTCACTGACACTACAGATGTTTGCTTCTGTCTACTGTTCTGTACTTCACGTTTTTCCTATTGCTTTATATCTGCTAAGGCTAGTTCTGTTATTTTCCTGTAAAATCCTAGGTCTCGTGTCTAGCTTCACATGTCTTCTCTCTCTTTTGTTTGTACCACAAGTGTCTATGCAGTTTTAAGTCAAACTAGTTTATCTTCATAATTCACTTTCAATGAATTTGTTGATACTGGTTGTTGGTATTGTTTATGAAGCCACGGAAGTGTTTTCTGCATTTTGGTAACAATGTCAAGGAATTCCTGATTTGAGAAAGTACATTTGGTATATCCTTGTTCTTACACAGGGTCAAATTATTGTTCTTTTTATGAGTTAATGCCTTCATTAATGGAAAGTGCTCTCTGGATTGGCATGTAGAGGTCGCATGTGCTACTTTTTAATGATCATCGTGGACTGTAGCTAAGAGAAAGCCCAGTAAACTTCATAATGATTCCTCCTATTTTAGCTCCAAAGTTGTATCCATTCAATAACTACCAGTTACTTTATGCTCACTATTTATAGTCTTTCCCTGTTGATTTGCCCAACTTAGTGGTGGAAGCTTCGCATTCTTCTCGGCAGGCTAGCACATGGTTCATTTGTGTGCTAACTCAGGCTAAGAGCAATCCCAAATTTGATGGTTCTGTATACTCAAATTGGCTGCTTAAACTAAAAATATCAATATCTCAAAACACTGGTAAACCATAGTCCATATTGAAACTGTACTTCTTGGATAGATTATAACTCTATCTATCCCTTCAGAAGTGAGATTCAAGTTCTGCACTGTATGGTGTTTGAGTCCAATTTTCAAGTTCTGCATCAACTCAAATGATCTGGGGATGTTTGTAAATTTGTTTCTTTCTAGTAACGGATCTTCATGTGAAGTGGACTTCAAATAGCCTTCATGTTTTCTATTCTGGCACAAATGTTCTCCAGCCACTATTATATTTTCTTCATAATGTCTATATTTTGTTTTCAGCCCTATTTTTCTCTTAAAAGTTCTGCGCTTTTCTCTTGATAAGCGTTTCGGAGGAGAGAGTTTGTCATTTCAGGCCATTAAAAAACCTTTTAGCGACACACATATGGTTGCTTTATTATTTTGTTTTTGGGGTTTATCCGTGTTTATATACCACTGAGTTCTATCAAAGGTCCATAATGTGCTGCTAACACCAACTTGTTGATCTGTCATTGTAACGACTCGGTGGGATATTTTGTTCTTCCATTTTGTACAATGTATTGAGTTTTGAAAAATTGCTGTGTAGCTTTGCACAGCAACATTGTTAAGAGTTTTCCACTTGTCCTGCATATGTTTGCTGTATGGATTTTTTTCTTCTAAAATTAGTAAATCATGAAGCAAATCATAATGGAGTAAGAGTAACACTTTGCTTAAGTAGTTTGGATCTTCGCTTAAAATCTCTTTTTTTTTTGGCTTTACTAGTATGAACCTTCTCTTAATATCTAATGTTTTTTTAATGATTGTGCAGAATGATGTGTTTCTACTTACATCAAATGCCATGTCCTACAATTCAGACGACACAGTCTACTATCGGCAGGTATCTATTTTACTAATGCTGTAATGCATGTGCCTTTTGCAACAGGACTATGTGATCCATTTTGTAGATATACCGCCGTACTGTTTGCACGCATTCAATGCTTGGTTTATATAGGTTATTCATAACCCTTGCAAATTTCTTATGCTTGGTGCAGTTTCTTTTCGTGAGACTTCTATAAATTTGTGCACCTGTTACACAAATGACACATTCTTCTTTTTGTTCCTGTTGTGCTTTTGTAGTTGGTGTTTTTATTACGTGTGAATATCATTGTTACACTAAGGCCAACACAAGTTTTTTTTTAATCAACTTCCTTTGGTATTTTTATTTTGATACTCCTTTGGACTCTTAGAACATTGAAAGTCCATTGGATTTGTGTTATACTGATAATTTCTACAAAGCCAAGACACCTAGGTCGCTATCTTCCACAGTATGTTTCCCCAGCTGGTAGGGATGAAAACGGAGCGGATAGTTTCCGTCCGCTCAGGACAAAAACGGATACGGATACCTTTCGGATCGGATAATTCTCGGATAGTTCGGATACGGATACGAATATGGATATTTTCTCCCGGATACGAATACGAATATGGTACCAGGGTTTCCGTCGGATACGGATAATAATTCGGATATCCGGTGAACAGTGCTATTCGGATATCCGCAGGACCCATGAGACATACCCTATTTCTTTCTAACTCTATAACCTTCAATATACCTTTATAGATTTTAATAGTAGTTTATCTCTTAACACTAGTCCATACTATTAATATTATTTAAATTTTAAAAAATATTTATAAATTATACCTCATTTTATATAAAATGAGCTAATTATATATGTTGATATTTGTTTCCATTAGAAGTTGAGTTGGTTTTCGTGTTCCGAGAAAAATTTGTTTCCGTATTCGTGTTCGATCATATTCGATTCTTATTCGTATTCGAGATAATCCGTATTTGTTTCCGTATTCGAGCTATCCGTATTCGTTTTCGTATCCGGTAAAAAATATGAAAACGAATATGGTATGAGCATTATCCGTCCGTATCCGCTCCGTTTTCATCCCTACCAGCTGGAATTATACTGCAGCACAAAAGAAATCGATACACTTGCATAAATACGAGGCATTGTATGTAGGATAAATTCCTTCTCTTATCTGGAAACTGTTGAAATCCATTGACGTGATCCTTTCTGTTATCTTTTGTCTTAAGACTATTTTATTTTGCAAGTTAGCCTGTCTTTGTGGTCTTTTTGGCTTCCAATTTCCTAAGATGTTCATTTATCTACTTAGGCACGATCTATTGAAGCTCTGGCCAAAAAGGATTTCGAGAACCTGAGGCAAGCTAGTGAGCCTGAAGAAGAACAACAACCCAAGACTGTACCCAGAAGAGGCAGACCACCAAAATATGCAAAGAAAATTGAGAAGACTGAAAATGATGTTTCACCAGATTTATCCAATGCAAAAACAAAATCTGCAGACCATGCTGAAACAATTAGAAAAAGGTTGACTGGGGACAGAACTCGAAATGCAAATATCACAACAAGAGACTCACCCTTTCTTCAACATAATACACCTGGTTCTTTTGCTGGTAAAAGAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTTATGGAGCTTGAGCATGGCTTGATATCGTGGTATCTTTCAGGGCCTTCGAAGTACGGAAAGAAGACCACCCCGACTATTTCAGATGATGAGCGTCGTAGTACATACGATCAGCAATACTTCCATAGTAGTCCTCTGTTTTCTGCCCTTGATGGTGAGAGGAAAGTACTTGTGCCGGTAAGCACATTCAGAAAATTTTGTCCTGAATAATTTATGAATTAAAAGATTTATAAACCTTGCCAACTTACGTACTGAACGTTTGCAACTACTACTTGGTGCATTGCTATCTCAGTGCTGAGTTATTTTAATTATGGAAACAGGTGGGACTTCAACAGCAACATGCATATGCTAGGAGCTTGGCGCGGTTTGCTGCAAAATTTGGTCCCGTAGGCTGGGAAATAGCAGCAAAGAGAATCAGACGACTACTGCCTTCTGGAACAAATTTTGGCCCAGGATGGGTTGTGGATGGTGAGCCACCTGAGAACTCTCAGTGGCCTCGAGTTCCCATGCTCTCTGATCCATCCATCCAGTCTACTGGTGTTCCAGCTAGCAACGTAATATCCAAGAATGATGAATCCAATCAGAAGTCTGGACTGACTTCGAACGAGGATTCTGGTGAAGAGCATCTAGCTAGAACCGAGCCAGTGGCTTCTACATCTGCATGCGTTAACACAAACTCTGTATCTGCCACCAAGCTAGCTACCAAGTGTGAAAACGGGGCTAATGTGTCATGTGATGGTGTGGGTAGTACTGGACAGACACCTCCCTTGCAGCAGCACAGCCATAGTCGAGAGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGTTGACACATGCTCAAGTTCTTGGGATGTTTTCCGGAGTCAATGGCAGAACAAATGGCTTTATCCATGGGCACCCACTGGTGGCTAATAGCATTAAAGCACCACACAATGGGGATGTTGGAAAGGTAGCCACTAATCCATCACCAGATGCAGGTCATGATTCAGAAGCTGCATTATCACAAACCATGACTAGTTCTGCTCCAAGTTTAAGTGCTGGTGTTCAACCATCAGGTTCCATGCCAAGCGGAAAGTTAGCAAATCCAAAAAAGCACCCGGACTTGGCATTGCAGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011773