BGIOSGA011789

From RiceWiki
Revision as of 09:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011789| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011789, complete gene.| tag = OJ1006F...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011789

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011789, complete gene.

LocusTag

OJ1006F06.10

Ensembl Transcript ID

BGIOSGA011789-TA

Ensembl Protein ID

BGIOSGA011789-PA

Length

972

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2180080..2181051

Sequence Coding Region

2180080..2180775,2180866..2181051

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2180080..2181051 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2180080..2181051 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCCGCTCAGCGGCAAGCGCCACGCCGGTGACGCACGCCGCAGCAGCGCCGCGTGCATATGCTGCATCGGCCCACACCACAAGCCGTCGTCCGCCGTCGGCGGTGGCGGCGGCTGCGTGCCCTGCCTCGCTCCCCACGCCGACCACAGCGTGAGAGCGCCTCTCACCAGCTGCTGCGGCAGCGGCGGCGGCGGCGGTGACAACAACCTCCGCGGCCGCAGCAGCACCACCACCAGCGCGCGCACGCCGCGCACACCCAAGACGCCGTGCACGCCCACGGCCAGGCGACTCTGCGGCGTCCGCTCCCGCACCCCGCGCCGCGGGCAGGTCGGCTGCTTCCAGTCGTCGGCGCCTGCCGCCGCAAGGACGCCGCGGACTCCCACGACGCAGCGCGCGTGCTACGTCCGTGGCACGGGCACGGCTCAGGGCAACGCGAAGCTGGGCAGGCGGCGCCGCTGGCTCCGGTCCACGGGCCAGACGCCACGCCGCACGGCGCGCGCGGGTGGCGACGTCGGCAACGGCGGCGACGTCAAGGTTTACAACACTGGCCTCGTGGAGGCCGCCGCCGAGGAGTCGGTAACAAAGGAAGAGGAGACCAGCTCGAACGACGAGTACGCGCTGCTGTGCAGGCAGGGCTTCCCACGCGAGGACGTGGCCGCGGTCACCATCCAAGCCTACTTCCGAGGCCACCTGGCGAGGCGAGCGTTCAAGGCGCTGAAGAGCCTGGTGCGGCTGCAGGCGGTGGCGCGGGGGGCGTACGTGCGGCGGCAGGCGGAGGTGGCGATCCACTGCATGCAGGCGATGGTGCGGCTGCAGATGCGCGTGCGCGCCAGGCAGATGCTCACCAAGCCCAAGGAAGGGCAGCTCTTGCCGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSPLSGKRHAGDARRSSAACICCIGPHHKPSSAVGGGGGCVPCLAPHADHSVRAPLTSCCGSGGGGGDNNLRGRSSTTTSARTPRTPKTPCTPTARRLCGVRSRTPRRGQVGCFQSSAPAAARTPRTPTTQRACYVRGTGTAQGNAKLGRRRRWLRSTGQTPRRTARAGGDVGNGGDVKVYNTGLVEAAAEESVTKEEETSSNDEYALLCRQGFPREDVAAVTIQAYFRGHLARRAFKALKSLVRLQAVARGAYVRRQAEVAIHCMQAMVRLQMRVRARQMLTKPKEGQLLPS</aaseq>

Gene Sequence

<dnaseqindica>1..696#787..972#ATGTCGCCGCTCAGCGGCAAGCGCCACGCCGGTGACGCACGCCGCAGCAGCGCCGCGTGCATATGCTGCATCGGCCCACACCACAAGCCGTCGTCCGCCGTCGGCGGTGGCGGCGGCTGCGTGCCCTGCCTCGCTCCCCACGCCGACCACAGCGTGAGAGCGCCTCTCACCAGCTGCTGCGGCAGCGGCGGCGGCGGCGGTGACAACAACCTCCGCGGCCGCAGCAGCACCACCACCAGCGCGCGCACGCCGCGCACACCCAAGACGCCGTGCACGCCCACGGCCAGGCGACTCTGCGGCGTCCGCTCCCGCACCCCGCGCCGCGGGCAGGTCGGCTGCTTCCAGTCGTCGGCGCCTGCCGCCGCAAGGACGCCGCGGACTCCCACGACGCAGCGCGCGTGCTACGTCCGTGGCACGGGCACGGCTCAGGGCAACGCGAAGCTGGGCAGGCGGCGCCGCTGGCTCCGGTCCACGGGCCAGACGCCACGCCGCACGGCGCGCGCGGGTGGCGACGTCGGCAACGGCGGCGACGTCAAGGTTTACAACACTGGCCTCGTGGAGGCCGCCGCCGAGGAGTCGGTAACAAAGGAAGAGGAGACCAGCTCGAACGACGAGTACGCGCTGCTGTGCAGGCAGGGCTTCCCACGCGAGGACGTGGCCGCGGTCACCATCCAAGCCTACTTCCGAGGCCACCTGGTGCGCGCGTAGAAAAACAAAAAAACTTATATCTAACCGAGACCTGTTTGTTTCGGCCATTGGTAAGAGGATTTTGCTTGTGTTTTGCAGGCGAGGCGAGCGTTCAAGGCGCTGAAGAGCCTGGTGCGGCTGCAGGCGGTGGCGCGGGGGGCGTACGTGCGGCGGCAGGCGGAGGTGGCGATCCACTGCATGCAGGCGATGGTGCGGCTGCAGATGCGCGTGCGCGCCAGGCAGATGCTCACCAAGCCCAAGGAAGGGCAGCTCTTGCCGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011789