BGIOSGA011830

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Revision as of 09:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011830, complete gene.| tag = OsI_099...")
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Gene Name

BGIOSGA011830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011830, complete gene.

LocusTag

OsI_09959

Ensembl Transcript ID

BGIOSGA011830-TA

Ensembl Protein ID

BGIOSGA011830-PA

Length

4339

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2673690..2678028

Sequence Coding Region

2673690..2673766,2673834..2674568,2676050..2676827,2677081..2677579,2677643..2678028

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2673690..2678028 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2673690..2678028 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCTCGTCGTCGGCGCATCGACCGAAGCCGTGAAGTCGCTGACCGGGAAGCTGGGCAGCCTCCTGGCGCAGGAGCCTTCCTCAGCAAGCTCAAGCGCACGGGACGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAACAGGTGCGGGAGGTGGGCTACGACATCAAGGACTGCGTCGACGATGTCGGCCACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGCGCGGCCATCTCCTTCCGGAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCAGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCCAGGGCAATGGTGGTGGTGGCGGCAGCGGCAGCGGCCTCGGCGTCGGAGCCAACGCTCCTAGAGACCGTCTAGCTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGCCATTGATGAGCTCCAGGAGTGGTTTTCCAAAGGGAAGGATGGCACCCAGCAGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCCATGGCGTTGTACCGCAAGCTTGGGGACGAATTCGATTGCCGAGCATTCGTGCTCGCGTCACAGAAGTTCCATCTCCCGACGGTTCTGAGAAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGACGCTTCTGAGGATACCCTCCATGGAATTGAGGGTTGGGGTGATGAAATGCTGAAGAAGAAGCTGCTTGAACAATTAACAGGCAAGAGGTACCATATCTTGGTAGATGACATATGGTCTGTATCAGCATGGGAAAACATTAGGGATTCATTCCCCAAGAGTGATAAGGGTAGTTGTGTAGTGGTGACTACAAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAACAAGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCTACAATTTGTTTCTTCAGATGATATCTGCTAATGATCTGTGTCCCATTAGACCTATTAATGCTCGCATTATCATGAAAACGTGTGGGGGCCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGACCTGACATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAGCAATCTCACCACCGAAGGAGTAACGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGCTTGCTGTACTTGAGCACATTTCCCAAGGGCCGCAGTATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTATCAACAACAGCAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTTCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCACTGTTATTGGCGGCCACTGGCAGACACCATTTCCAAGCTACAAGGTCGTAGCTCTACAAACACTTTCTGGGATGGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGGAGCAGTCACCAGATATGGCCATCAGAAACTCTACACCCACCAGAGCCGAGGAAAGAGACAACACGGCTTTGCATGGTCCCCATAAAGAAGATAGCAAAGTGGACTTTCCAAAACAGCTTCGTTCCCTTGAAGCTCTGGAGAAGCTCATCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCTAAAGACGATGAGTTACTTCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGACAGCTCACTGAGTTCTTCGCAAGCACCACCAGAACACCTGTACACCCTTGAACTTTCTGGCATGTTGTCTAAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGCAGACAATTATTCAAATGCTCTCAAAATAATGCATAAGAATACATTGGAGTCAGGAGGTATGATCTTTGTGCTAGATGAGGGATTTGAAAAGCTGAAGCTACTGCGTTTTGCGGCACCTGTGCTACCTTCTCTGAGCTTTCTAGAAGGGGCAATGCGGCAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTACGGTCTGGAAAACCTCTCAAAGCTGCAACAGGTATTTTTAACAGTCAGCAGCCAGGCACCTGAAGATACTAGGGCAAAGACATCTCATATCAAACGACTGGCAAACATGATTCAAAAGGCTAATAATTCCCCTAACCCCAGTGTGGTGATAGATGAGTACAACGAACTAGCAAAACAATGA</cdnaseq>

Protein Sequence

<aaseq>MDLVVGASTEAVKSLTGKLGSLLAQEPSSASSSARDDVDHDEQRQDWMKQVREVGYDIKDCVDDVGHRLGREPRGSGAAISFRRAWYLLTTLYQRRRIAAEIGNLKLRAQHVSERRTRYGVENLQGNGGGGGSGSGLGVGANAPRDRLAPLPRLIGTMEPVGMDAAIDELQEWFSKGKDGTQQRYLAIVGFGGLGKTTLAMALYRKLGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADASEDTLHGIEGWGDEMLKKKLLEQLTGKRYHILVDDIWSVSAWENIRDSFPKSDKGSCVVVTTRFNSVAEACRRQQGHVHKLKQLDPESSYNLFLQMISANDLCPIRPINARIIMKTCGGLPLAIVVVAGLIASKMKSKIDLTLDQHLVDVDEALSAELGSNLTTEGVTQIINHCYKNLPPDLKTCLLYLSTFPKGRSISRKHLIRRWIAEGFITEEHGKTAEEVAEDSLNELIGRNLIKPINNSSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTPFPSYKVVALQTLSGMEISGSSTLEEDREQSPDMAIRNSTPTRAEERDNTALHGPHKEDSKVDFPKQLRSLEALEKLINLKKLAIYKLVKFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLDSSLSSSQAPPEHLYTLELSGMLSKVPGWIDRLHNLEKLTLSLTSLKTADNYSNALKIMHKNTLESGGMIFVLDEGFEKLKLLRFAAPVLPSLSFLEGAMRQLQRLELRFRMVDYMYGLENLSKLQQVFLTVSSQAPEDTRAKTSHIKRLANMIQKANNSPNPSVVIDEYNELAKQ</aaseq>

Gene Sequence

<dnaseqindica>1..77#145..879#2361..3138#3392..3890#3954..4339#ATGGACCTCGTCGTCGGCGCATCGACCGAAGCCGTGAAGTCGCTGACCGGGAAGCTGGGCAGCCTCCTGGCGCAGGAGTACACCCTGATCGCCGACGTCCAGGACGACATTCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGCACGGGACGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAACAGGTGCGGGAGGTGGGCTACGACATCAAGGACTGCGTCGACGATGTCGGCCACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGCGCGGCCATCTCCTTCCGGAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCAGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCCAGGGCAATGGTGGTGGTGGCGGCAGCGGCAGCGGCCTCGGCGTCGGAGCCAACGCTCCTAGAGACCGTCTAGCTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGCCATTGATGAGCTCCAGGAGTGGTTTTCCAAAGGGAAGGATGGCACCCAGCAGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCCATGGCGTTGTACCGCAAGCTTGGGGACGAATTCGATTGCCGAGCATTCGTGCTCGCGTCACAGAAGTTCCATCTCCCGACGGTTCTGAGAAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGACGCTTCTGAGGATACCCTCCATGGAATTGAGGGTTGGGGTGATGAAATGCTGAAGAAGAAGCTGCTTGAACAATTAACAGGCAAGAGGTATGATTTTGGGATTGCTAATATCTATCTCTTCACCACATTTTTATTGTGCTGTCTTACTAGTCATCACTCCGTGCGTTTGCATACTCAAAAAACCTCCAAATTATTGTACATAAAGATTTTTTTTTTCGCTGAGAAGACCGAAGGAGGCCATCCGAATGTATTAAGAAGAAATAAAAGTTACTTGAAAAAACACCACAATGCACCAAGGTGCACGACCACACACCAACGCACTACCACCTAAGCACAAACCACTGAGGGTGAACGCCGCTAGGCATACGGCAACACCACAGAGACGAGACTCCGAAAACGATGCCACCAAGATGGTCACAACATCTAGAATGCCACCACCGCCCATCTAAAAAGATGTGGTTTTCACCCAGAAAAGCTCATCAAAAAGGGGAGAGGGTAACCCTCGACAGTGCCCCAAGGAGGTTATGACGCCCGAAGGCGTAGCCGCTGCCGGTTTGGTGAACACCGGACTAGCCTTTCACCTAGGACCCTATAACCTTGACTGCAGATCGCCGTCCACCACACAGAACCACCACATAGACAAAAAAGGTAGCACGTAGCTTCCACCACCGCTGGCCTCCTCGTCAGTTTTGGCCGAAGGAGAACCCGGGATTGGGTGGCATTGCTTCGGTAGTCTGAGCTTCCCCTGTTGACAAGCTGCTGCCTCAATCCAACCTAGGAACTCCCCGCAAAGAAGGGGAGCAGCTCCAGGAAGGGCGAGGGTGCTGATCGGCAATGAGGAAGACGACCCACCTCCGCCAACTCCCTTTGCACTACCATCTGGGCCTACGCCGACGCCGGATATGCTGCTGCTCCGGCTTCGGCGCCACCTGTCGGCGCCCCCTTTGTCCGGCCTCCGCGCCCCACCTGGCCGCTAAGGGCACCGCAACGGCTTCCCGGCTACCTGGGCGTCAAGGCCTGGCCGAGCCATGGGCTGCTCGCGCCGGTACCAGCGAGACACGGCTGCCGCGACCCACGCCGCTGAGCCGCCACCGCCGCTCCCAACCGCCGAGCCGCCACACCCGGGTTGCTGCACCAGCACCACACCGGGCAGGCTGCGCTAGCACCGCCTCCACGCACCTCCGCACGCTGCCACGCCCCACCTCCACGCACCTCACCCGCACGCTGCCGAGCCGCCACCGCCGCGCACCTCGCTGAGCCGCCACCGCTGTCCCTAGCCGCCTCGCGCCGCCACCACGCTAGATCCAGGCGCGGGATGGCCGGATTCGGCCTTGGAGGCACCGGATCCGCTGCCTCCCCACACTGCCACAGCGTCACCACCTCCGACCGCGATGGGGGCTTCGTCGTTCACCCCGTCCACGTCGCGCCGAGGAGGGAGAAGCCAAGAAGAAAGGAAAATATTGATATTCCTAGTTGGAAAATTTTGATTATACATTTGTGTCTGGAATGAGCACTATAAAACGTTTTTTTATAACTAGCTAATTACTTCCAAACAATGCTTGAAGCAGGTACCATATCTTGGTAGATGACATATGGTCTGTATCAGCATGGGAAAACATTAGGGATTCATTCCCCAAGAGTGATAAGGGTAGTTGTGTAGTGGTGACTACAAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAACAAGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCTACAATTTGTTTCTTCAGATGATATCTGCTAATGATCTGTGTCCCATTAGACCTATTAATGCTCGCATTATCATGAAAACGTGTGGGGGCCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGACCTGACATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAGCAATCTCACCACCGAAGGAGTAACGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGCTTGCTGTACTTGAGCACATTTCCCAAGGGCCGCAGTATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTATCAACAACAGCAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTTCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCACTGTTATTGGCGGCCACTGGCAGACACCATTTCCAAGCTACAAGGTACGGCGATTGTCTGTTCATAAAAGTGATTGGCAAGAAACAGAAATGGTAGAGAGGATGAAATTGTCTCATGTCCGATCCTTGACAGTATTGGAGAGTTTCAGTGCTCTTCATTCTACTATGCTCAAGTTCCAGATACTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTACAAAGGTCGTAGCTCTACAAACACTTTCTGGGATGGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGGAGCAGTCACCAGATATGGCCATCAGAAACTCTACACCCACCAGAGCCGAGGAAAGAGACAACACGGCTTTGCATGGTCCCCATAAAGAAGATAGCAAAGTGGACTTTCCAAAACAGCTTCGTTCCCTTGAAGCTCTGGAGAAGCTCATCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCTAAAGACGATGAGTTACTTCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGACAGCTCACTGAGTTCTTCGCAAGCACCACCAGAACACCTGTACACCCTTGAACTTTCTGGCATGTTGTCTAAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGGTACTTTGGCGGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGCAGACAATTATTCAAATGCTCTCAAAATAATGCATAAGAATACATTGGAGTCAGGAGGTATGATCTTTGTGCTAGATGAGGGATTTGAAAAGCTGAAGCTACTGCGTTTTGCGGCACCTGTGCTACCTTCTCTGAGCTTTCTAGAAGGGGCAATGCGGCAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTACGGTCTGGAAAACCTCTCAAAGCTGCAACAGGTATTTTTAACAGTCAGCAGCCAGGCACCTGAAGATACTAGGGCAAAGACATCTCATATCAAACGACTGGCAAACATGATTCAAAAGGCTAATAATTCCCCTAACCCCAGTGTGGTGATAGATGAGTACAACGAACTAGCAAAACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011830