BGIOSGA011834

From RiceWiki
Revision as of 09:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011834| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011834, complete gene.| tag = OsI_099...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011834

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011834, complete gene.

LocusTag

OsI_09963

Ensembl Transcript ID

BGIOSGA011834-TA

Ensembl Protein ID

BGIOSGA011834-PA

Length

4287

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2716346..2720632

Sequence Coding Region

2716346..2716570,2718765..2719632,2719800..2720632

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2716346..2720632 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2716346..2720632 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGCGTGGGATCGCGCCAAGCACGCGCTCGCCACCAGGCTCTGCATTCGCTTCCCGGCGCGGCAGAGGGCCGTGGAGGATGCACCGGCGGAAGACGAGGCGCCTCCGCCGCCTCCACCGCCTGCGGCGGCGGCGGCGCGTGCTGTGCCGGAGGAGAAGTTGAAGTCGCCATCGGTGTCCGTGCGGCGGCTTTCGAGCTCTGGGAGCTGGGGCAAGAAGAAGGTATGTGCCATTTGCCTTGGTGGCATACGGACAGGAGGACAGGCCTTGTTCACTGCTGAATGCTCCCACGAATTCCATTTTCATTGCATCTCCTCAAATGTCAACCATGGCAATTACGTCTGCCCGGTATGTCGTGCTGAGTGGAAAGAACTTCCCTTCCAAGGAACTCAACCTGCAGACACTGCTTATGGACGAGCTAGAGTAAGCCCTGTAAATTGGCCCCAGGATGAGGGGCAGATGTCTGTTGTCCGCAGGCTTTCCCGCGGATATAGTGGAAACCTTCAACAGCAACTTGCTGTCTTCCGTACTCCGGAGGCAAGCATTTTCAATGATGATGAGAACATTGATCCTCAGTCTGAAACAGTTGATGATCATAATGCAGTTACTAAATCAGTTGAGATCAAGACATATTCAGAATTTCCAGCCATACAAAAATCAGAAAGACGGAAGGTCTTTGCTATCTTAATACATCTGAAGGCTCCAAAGTCCTTGGACTCGGTGAGCTCCCGTGCACCTCTTGACCTTGTGACTGTGCTTGATGTCAGTGGCAGCATGTCGGGGATAAAACTTTCACTTCTTAAGCGTGCCATGAGTTTTGTCATCCAAACACTTGGACCCAATGACCGCCTGTCTGTTGTAGCCTTTTCATCTACAGCACAGAGGCTCTTTCCACTTCGCCGAATGACCTTAACTGGTCGGCAGCAAGCCTTGCAAGCCATTAGTTCCCTTGTCGCAAGTGGTGGCACAAACATTGCTGATGCGCTAAAGAAAGGTGCTAAGGTGGTCAAGGATCGTCGGCGGAAGAATCCTGTTAGCAGCATAATTCTTCTTTCTGATGGTCAAGACACCCATTCATTTCTATCTGGCTCAATCCAAGATGCATTTGCTCAATGTATGGGTGGCCTCCTTAGCGTTGTAGTTAAGGATATGAGGCTGTGCATCGAGTGTATAGATGAAGGCGTGTCTCTTACCTCCATCAAGTCAGGCAGCTATGCAAGTCAAGTAGCTGGAAATGAACGCAGTGGATTGGTTGATATTGGTGACCTCTATGCAGATGAAGAGAGGGGATTTCTGGTCACTCTACATGTCCCAGCCGCACATGGACAGACTGTGCTGATCAAACCAAAATGCACATACCTAGATGCAATAACTATGGAAAATGTCCAGCTAGACGGTGAAGAAGTGATTATTCAGCGTCCTGCATATTGTGTTGACTGTACAATGTCACCTGAGGTTGAGCGTGAATGGCACCGTGTTCAAGCCACAGAGGACATGTCTGCTGCTCGATCTGCGGCTGAGGATGGCTCTTTCTCTCAGGCCGTGTCAATCCTTGAAAGCCGTAGGAGAATACTGGAGTTACATGCAGCACACTCTTCAGACAGTCAGTTCTTGGCATTAATCAAAGAGCTAAGGGAGATGCAGGATAGGGTGGAGAGCCGGCAGAGGTACGAGGAATCAGGCAGGGCTTACATGCTGTCAGGCCTGAGCTCACACTCATGGCAAAGAGCAACTGCACGTGGCGACTCGACAGAGCTCACAACCCTTATTAATACTTACCAGACACCATCCATGGTTGATATGCTACAGCGCTCGCAGACTATCCTGCCCTCTGTTGTCGAAATGCTGAACCGTTCTTCAACTGTTGCTACTTCAAAGTCCTTCTCTAGCTACCTCCCAACCTCCCGCCATATTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAPAWDRAKHALATRLCIRFPARQRAVEDAPAEDEAPPPPPPPAAAAARAVPEEKLKSPSVSVRRLSSSGSWGKKKVCAICLGGIRTGGQALFTAECSHEFHFHCISSNVNHGNYVCPVCRAEWKELPFQGTQPADTAYGRARVSPVNWPQDEGQMSVVRRLSRGYSGNLQQQLAVFRTPEASIFNDDENIDPQSETVDDHNAVTKSVEIKTYSEFPAIQKSERRKVFAILIHLKAPKSLDSVSSRAPLDLVTVLDVSGSMSGIKLSLLKRAMSFVIQTLGPNDRLSVVAFSSTAQRLFPLRRMTLTGRQQALQAISSLVASGGTNIADALKKGAKVVKDRRRKNPVSSIILLSDGQDTHSFLSGSIQDAFAQCMGGLLSVVVKDMRLCIECIDEGVSLTSIKSGSYASQVAGNERSGLVDIGDLYADEERGFLVTLHVPAAHGQTVLIKPKCTYLDAITMENVQLDGEEVIIQRPAYCVDCTMSPEVEREWHRVQATEDMSAARSAAEDGSFSQAVSILESRRRILELHAAHSSDSQFLALIKELREMQDRVESRQRYEESGRAYMLSGLSSHSWQRATARGDSTELTTLINTYQTPSMVDMLQRSQTILPSVVEMLNRSSTVATSKSFSSYLPTSRHIA</aaseq>

Gene Sequence

<dnaseqindica>1..225#2420..3287#3455..4287#ATGGCGCCGGCGTGGGATCGCGCCAAGCACGCGCTCGCCACCAGGCTCTGCATTCGCTTCCCGGCGCGGCAGAGGGCCGTGGAGGATGCACCGGCGGAAGACGAGGCGCCTCCGCCGCCTCCACCGCCTGCGGCGGCGGCGGCGCGTGCTGTGCCGGAGGAGAAGTTGAAGTCGCCATCGGTGTCCGTGCGGCGGCTTTCGAGCTCTGGGAGCTGGGGCAAGAAGGTCAGGTTTATCTTTCTCCCTGGGAGAGAATCTATTCTAAACCACTGAGTTTGATCGACTTCAACGATTTGCCATCGACATTGTCTCCTTCTATAATATACCGACGACTTTATTAATTGTTCTATAATATGCCATTGGGCTGGGCATTCTTTTCAAAAATACCCAAAATACCCTTAGAGACATACCAAATTAACAATTGATTTATCTCATTAGAAGTTTCAAAAAAATAAAAAAAAATTTAGTGGCCTCGTTACACAACATGGAAGTTTCTATACATGTTTCAAGTTTTTTCTGGTATATTTAGATTTTAGAAAATAATATTTTTATGTGGTATATGAGAGAAAATTTGTTTATACGAGAGATAATAGCACAAAAATATCTTATGTAGAGTATGAAAGATGATTTATATTAAAAACATCAATAAAATGTATTTTATATAGCATATAACAAATGAGTTATATATTTTTTTACAAAAAATATAAATGTAAAAAACTTGAAACTTCTATACAAACTTCCATGTTGTGTAAGTAGGCCATATAATTTTTTAAATTTTTTTTTGAAATTTCTAATAGGATAAATTAATTGGTAACCTTGTATGTACATAAGGGTATTTCAGGTATTTTTAAAAATAGTGTCCAGCCCAATGGCGTATTGTAGAACAATTGATAAAGTCACTGGTATATTATAGAAGGAAACAATGTCGATGACAAATCGTTGAACTCGAACAAACTCAGTGGTATAGAATAGATTCTCTCTTCTGGTAATGTTAGATTGCGATTGCTCTTGATTTATGGTGTGCAGATGTGAGAAAAAGTGTCGGCTTTAATTAATGCATATTAGATGGTTCTTTTTTGTTGTCAAATAAAACATCGCGAATTTCGGTTCCATGTTGGTAAAATATCTTCGTAGGGGTATGACAAGTTCATTTTTTGTCCTAAAACTATTGTGGATCACAATAGCGAGAGAGAACATTCTTTTTCTGGGTGTCATCTCTTACCTGAAAGGGTAAAATATCTCTTTATTCTCCACTCCTTTCTAGATATGTTTAGTTTCCATTTGAAACTTGCATATGGGCATCGATTTTATCCGATTTGTCTAAAAATCATGTAGTTGCGTAAATTCTCTTTGAGAACATTTTTTTGATAAACCTGTAAATTTGCAATATATGTAAATATGGCCACCTCTTTCAAATCGTTCATGTTAATACTGTTCCAAATGCTGTATGTATATTCTTCATTGTTTTGAAGTTTTGCTTGAATTTATTGGCACAACGATCTTTGGCATAAATGGCTTCAGACCAGTGCCCGAACAAAGAGAAAGTGTTGCTTCAGCCCATTGCAGACCAGAACATGCATTTTGATTGGTTGGTGGATCATCTTATCTGACTTGGTCCCAGTAGTTGTTGAAAATACAACTTGATTTGTCACATTGACTAATGAAGAATATTTACTTTTTGATGACGGTGCACATGTTTTTAGAACAACGATACACATGATGAAATAGCCTTCATTTTTTTTTGAAAGATCACCCCCCCCCCCCGGGGGGGGGGGGGGGGGGTTATATTATAATCTGGTGTTGTGTCATCTATGCTGCAGCTGCAACTGACCATTCAGTATTTTATTACTCCCAAGCTGCACATGCATACACATTTCAGTGTGTGCATATTTTTCCAATTCGGAAACTACCTGTGTCTATCCAAATTCCAAATCATTCCATCCAAAATGGTTCATCAATCATGAAAACAAATTGATCATACTACACTTGTTATAGGAAGGTTGGATTGTAAGCCATCCCTGCGCTATTGTCAAAACGTGTAAATTCTTGTTCTTAAGCTTTGTCCATGACAAGTTTATCGCCATCCTTTTAGTCATTTGCTCCCTCCTTTTGACATGTTAAATTTTCTTTTCCTTGGATAGTGGTTCAAAGCCACTTATCTTTTCTCATTAAGCTGTATCAAGTATCTACTCTTCACCTTTACTTGTGTGCTCCTGAGAGATTTTACATTCGTAAATAGTACAGTCATATGACACACAGATTCCTTTATGTTTCTTTCGTATGACACATAAATAGGATAGTCTTTATGTATATTCAGGCACAATTTATAGTTGATAATGGCAGAAGTTTATGTTACCATGAAAGCTCTGATGGTAGCAATGCTAACTTTTTTTTTTGTTGTTTACTCTCTTCATTTCAGAAGGTATGTGCCATTTGCCTTGGTGGCATACGGACAGGAGGACAGGCCTTGTTCACTGCTGAATGCTCCCACGAATTCCATTTTCATTGCATCTCCTCAAATGTCAACCATGGCAATTACGTCTGCCCGGTATGTCGTGCTGAGTGGAAAGAACTTCCCTTCCAAGGAACTCAACCTGCAGACACTGCTTATGGACGAGCTAGAGTAAGCCCTGTAAATTGGCCCCAGGATGAGGGGCAGATGTCTGTTGTCCGCAGGCTTTCCCGCGGATATAGTGGAAACCTTCAACAGCAACTTGCTGTCTTCCGTACTCCGGAGGCAAGCATTTTCAATGATGATGAGAACATTGATCCTCAGTCTGAAACAGTTGATGATCATAATGCAGTTACTAAATCAGTTGAGATCAAGACATATTCAGAATTTCCAGCCATACAAAAATCAGAAAGACGGAAGGTCTTTGCTATCTTAATACATCTGAAGGCTCCAAAGTCCTTGGACTCGGTGAGCTCCCGTGCACCTCTTGACCTTGTGACTGTGCTTGATGTCAGTGGCAGCATGTCGGGGATAAAACTTTCACTTCTTAAGCGTGCCATGAGTTTTGTCATCCAAACACTTGGACCCAATGACCGCCTGTCTGTTGTAGCCTTTTCATCTACAGCACAGAGGCTCTTTCCACTTCGCCGAATGACCTTAACTGGTCGGCAGCAAGCCTTGCAAGCCATTAGTTCCCTTGTCGCAAGTGGTGGCACAAACATTGCTGATGCGCTAAAGAAAGGTGCTAAGGTGGTCAAGGATCGTCGGCGGAAGAATCCTGTTAGCAGCATAATTCTTCTTTCTGATGGTCAAGACACCCATTCATTTCTATCTGGTGAGGCTGATATAAACTACAGTATACTTGTTCCCCCTTCAATCCTTCCTGGGACAAGTCATCATGTGCAAATCCACACCTTTGGTTTTGGTACAGACCATGATTCGGCTGCCATGCATGCTATGCTGAGACATCTAATGGCACATTTTCATTTATTGATGCTGAAGGCTCAATCCAAGATGCATTTGCTCAATGTATGGGTGGCCTCCTTAGCGTTGTAGTTAAGGATATGAGGCTGTGCATCGAGTGTATAGATGAAGGCGTGTCTCTTACCTCCATCAAGTCAGGCAGCTATGCAAGTCAAGTAGCTGGAAATGAACGCAGTGGATTGGTTGATATTGGTGACCTCTATGCAGATGAAGAGAGGGGATTTCTGGTCACTCTACATGTCCCAGCCGCACATGGACAGACTGTGCTGATCAAACCAAAATGCACATACCTAGATGCAATAACTATGGAAAATGTCCAGCTAGACGGTGAAGAAGTGATTATTCAGCGTCCTGCATATTGTGTTGACTGTACAATGTCACCTGAGGTTGAGCGTGAATGGCACCGTGTTCAAGCCACAGAGGACATGTCTGCTGCTCGATCTGCGGCTGAGGATGGCTCTTTCTCTCAGGCCGTGTCAATCCTTGAAAGCCGTAGGAGAATACTGGAGTTACATGCAGCACACTCTTCAGACAGTCAGTTCTTGGCATTAATCAAAGAGCTAAGGGAGATGCAGGATAGGGTGGAGAGCCGGCAGAGGTACGAGGAATCAGGCAGGGCTTACATGCTGTCAGGCCTGAGCTCACACTCATGGCAAAGAGCAACTGCACGTGGCGACTCGACAGAGCTCACAACCCTTATTAATACTTACCAGACACCATCCATGGTTGATATGCTACAGCGCTCGCAGACTATCCTGCCCTCTGTTGTCGAAATGCTGAACCGTTCTTCAACTGTTGCTACTTCAAAGTCCTTCTCTAGCTACCTCCCAACCTCCCGCCATATTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011834