BGIOSGA011856

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Revision as of 09:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011856| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011856, complete gene.| tag = OsI_100...")
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Gene Name

BGIOSGA011856

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011856, complete gene.

LocusTag

OsI_10008

Ensembl Transcript ID

BGIOSGA011856-TA

Ensembl Protein ID

BGIOSGA011856-PA

Length

4430

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2994933..2999362

Sequence Coding Region

2994933..2995247,2995471..2995569,2996248..2996345,2996462..2996549,2996644..2996703
,2997958..2997990,2998119..2998196,2998321..2998489,2998573..2998655
,2998742..2998833,2998917..2998986,2999094..2999135,2999225..2999362

Genome Context

<gbrowseImage1> name=IndicaChromosome03:2994933..2999362 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:2994933..2999362 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTTGGGACATGTTAAGTTGAAGCTGCTTTCACTAGTGTTTTTTTTTTTGGGGAGCAAGGTTGGAGCTGCTTTTACGAAAGACGCGCACTTCCGGTTCAGAGAAGCAACAGTTGCTTCTCTCGACAGGAAACCATGCAGTAGAAATACCAGGTTCTGTTTTGGCCAAGAAAACCCGAGAAGGTATCTCGTGTACGGTGTAATGCCAGAGAGCTCGACGGGAACAGAGGATGGCCTCATGGCCGACATCATGTACCAAGGTGTACGAGATCATTCAGGTCGGAACAACGCATTGCATAAGGATAATCCGGTCTTTTCGCGCTGCAAGGAGGAGGCGAGCGCAACATCAAGCATCATCGACCACAGGACGGCCAAAGTCGGCAGACGAGATGACGGCCCGAACATGTCAAAGGTGCTAAGAGCTACAATACCTGAGAATTCAGTTAGTGGATCATCAGTTCGAGGAAAGCTGCGAGAAATGGAGATGGACTTGGCAGTCGAGCAGTACGGATGCGTGCATTACAGGAGGAAATGCAAGATAAGGGCGCCCTGCTGCGGCGAGATCTTCGATTGCAGGCACTGCCACAACGAAGCGAAGGACTCGTTGGAGGTCAGCATCAGCGACCGGCACGAGATCCCTCGCCATGAAATCAAGCTGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTACAACAGGATTGCTCCAATTGTGGGGCATGCTTGGGTAAATATTTCTGCGCAAAATGCAACTTTTATGATGACGATGTATCAAAGAACCAATTTCACTGCGATGGATGTGGCATATGCAGGCAAGTTGTGCTAAATCTGCATTCCTGTGACGGAGTAATGAAATATGAGCCCTTTTTGATAAATTTCACCATCACATTTTACAGAACTGGTGGTGCAGAGAACTTCTTTCACTGTGACAAATGCGGATGCTGCTACAGCTATGTGCTGAAGGATTCCCATCATTGTGTGGAAAGAGCAATGCACCATAACTGCCCTGTATGCTTCGAGTATCTATTTGACTCAACAAAAGACATCAGTGCACTGCACTGCGGACACACGATCCATCTGGAATGCCTATACGAGATGAGATCCCATCAACAATTCTCTTGCCCGGTCTGCCTGAGGTCTGCTTGTGACATGTCCCATGCATGGCAAAAGCTTGATCAAGAGGTTGCAGCATCGCCGATGCCAGTGATCTATCAGAAGAAGATGATATGGATCCTATGCAACGACTGTGGGACGACATCGAACGTGCAATTCCACATATTGGGACACAAGTGCCCCGGATGCAGCTCTTACAACACCCGGCAGACAAGAGCCGCCCCTGCTGCCGCGTGCTCCAGAGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MALGHVKLKLLSLVFFFLGSKVGAAFTKDAHFRFREATVASLDRKPCSRNTRFCFGQENPRRYLVYGVMPESSTGTEDGLMADIMYQGVRDHSGRNNALHKDNPVFSRCKEEASATSSIIDHRTAKVGRRDDGPNMSKVLRATIPENSVSGSSVRGKLREMEMDLAVEQYGCVHYRRKCKIRAPCCGEIFDCRHCHNEAKDSLEVSISDRHEIPRHEIKLVICSLCNKEQDVQQDCSNCGACLGKYFCAKCNFYDDDVSKNQFHCDGCGICRQVVLNLHSCDGVMKYEPFLINFTITFYRTGGAENFFHCDKCGCCYSYVLKDSHHCVERAMHHNCPVCFEYLFDSTKDISALHCGHTIHLECLYEMRSHQQFSCPVCLRSACDMSHAWQKLDQEVAASPMPVIYQKKMIWILCNDCGTTSNVQFHILGHKCPGCSSYNTRQTRAAPAAACSRV</aaseq>

Gene Sequence

<dnaseqindica>1..315#539..637#1316..1413#1530..1617#1712..1771#3026..3058#3187..3264#3389..3557#3641..3723#3810..3901#3985..4054#4162..4203#4293..4430#ATGGCTTTGGGACATGTTAAGTTGAAGCTGCTTTCACTAGTGTTTTTTTTTTTGGGGAGCAAGGTTGGAGCTGCTTTTACGAAAGACGCGCACTTCCGGTTCAGAGAAGCAACAGTTGCTTCTCTCGACAGGAAACCATGCAGTAGAAATACCAGGTTCTGTTTTGGCCAAGAAAACCCGAGAAGGTATCTCGTGTACGGTGTAATGCCAGAGAGCTCGACGGGAACAGAGGATGGCCTCATGGCCGACATCATGTACCAAGGTGTACGAGATCATTCAGGTCGGAACAACGCATTGCATAAGGATAATCCGGTCGTCAGCAAACAATGCATTCAAGCAGGCACAGGAACTTGACATACAGTAACGATCCAGCGATTAATGACCAGGTTTCCTTTTCCGCATTTTGAAAGGCATCGACGAGCAGATTTATGACCAACCCCAAGTAGGGGTACTCCGTATCTGCCAACAACTTCGGACAACAATACTTTCAACCATGATTACACTGATAAAATTACAGCACGACACTCACTTCATTCAGTTTTCGCGCTGCAAGGAGGAGGCGAGCGCAACATCAAGCATCATCGACCACAGGACGGCCAAAGTCGGCAGACGAGATGACGGCCCGAACATGTCAAAGGTTTGGGGGAGGATGGGATGGGCAGCCGCACGCGGGTGGGTGACGCGCGGCCCGCCCGACTACTTTATTTACTGCGTCACATAAAGACCAAGCGCCACCGAATGCTACGCGACCCCCTCTCCCCCTCGTTTTTCTCCTCTTCTTTAAACCGCGCCGCGCCGCGCCTACCCAAATATATAACCGTGGGTGCAGCCGTGCGCCGAGCCGTGCGTGCAGCAGGCGCAGGCCGTGCTCGTGCTCGCTCGCTCGGGCAGTCGGTCTCCCTCCGCGAGGAGAGAGGAGACCCTTGGCAAGCGTGGAGGACGACTCGGTGCCGGCCGAGTGCGGCTGCTGCTGCTGCGGCTGTCTCCTGCCGTGGCCGCGAAATCATCGGGTTGGCCGGTGGTCGGCGCACGCAGGTACTACGTGGGACGGTGCCGTGTGGCTCGTCCGTGCGGCTCTGTTTTTTTTTCTCTCTCTCGGGTTTGGCGTTAAGTACGGTGAGAGGCAGCTGCTTCGCGTCTTGGTTTCTTGTTCTACCTTGCGTTTTGTTTGGTGTCTCGTCGTCGGTCTGGTCTGTGGTGGCCGGCCGCGAGATGGCCGAGCTGATGCAGAGGAGGTGAAAAACCTGAGAAGAGATGCAGAGCAGAGCAAGAAGTTTTGAGTTGATTTGCTTCTTCATTTTTGGTCTCTCTTCAGGTGCTAAGAGCTACAATACCTGAGAATTCAGTTAGTGGATCATCAGTTCGAGGAAAGCTGCGAGAAATGGAGATGGACTTGGCAGTCGAGCAGTACGGGTAAGCACCATTCATCATGTCTCCGTTCCTGTGGATGCAGTGGATCTTTTTTACTAGCAAGTCGTTACTGATCACTCGTTTGTTTCTCCTCCTTTTTTTCCTCTTCCATATGCAAGATGCGTGCATTACAGGAGGAAATGCAAGATAAGGGCGCCCTGCTGCGGCGAGATCTTCGATTGCAGGCACTGCCACAACGAAGCGAAGGTATCACCGTTTTTTCCTTGTCTCAGTATTACATGCTTTGAATTGTCTCTGGCTAGAAGAAAAAAACCTTATTGTTCTGCTTACTTTGTTACAGGACTCGTTGGAGGTCAGCATCAGCGACCGGCACGAGATCCCTCGCCATGAAATCAAGCTGGTCGGTGTCCCTGTCCAGTTATTTTGGCTGCCCTTTCCAGCGTATCACTATCGCTGTTACTTTATCGGATATTTTGCTGCATTTGATGCTAACTGTCGTGTCGGACATGATATTAGTAATTTGCGCTGCACAATATTCTTGGAAATGATTGATTACTGCTGCTTCAGTTCCATCCTGAATTTCTTTTCATTTTCTATTGTACGCTTATCCACTACTACTGTATACTCCCTCCGTCTCAAAATATAAGCATTTTTAGATTTCGACACATTTTTCGAGATATTATTATGATCAACAATATGTATAAAGATAAAATATTTTAAATAAAAATAGTTGTATATTATGATAGTTTGATTAATGATAAACTATTAGCATCAATTTTACATGATTGATTTTTTTTTGTCATTAATAGTTAAAATTAGAAATGTTTGACTTTGCAATTTTCTAAAATTGTTTATATTTTAGGACGAGGAGAGAGTAGATACTTAGCCAGATTCTGTTGATTTTTTTGGCTACTTAATGTGTCCGTGCAGCAGTATAAGTGCGTCCTCCATATTAAGTACTCTCTCCGTCCCAGAATATAGCAACCTAGCATGGGATGAGATCTATCCTAAGACCATGTATTTGGACAATGAATCCAAGAGAATAGTCAAGTGGGAGAAACTATTGTAGGCATGGTTCACCGTTAGTCAAGAACTCAGGATGATTTGAAGCACAGCATAGTTGCAAAAGAATAGATTGTACCATCAACTACACACTCCTATTATTGATGGCTGACTATAACAGGTGTTTCAGAAGTTACTCAAAGACTGAATGAACTATAACTAACAGTGCAAGTTCATATCCTAAAGATTGAATTGGTTGCATGTCCGATCTAGATCATTATCTGAAAATGCTCATACTAGATCATTATCTAAAAAAAATATATATTTCACTACGTGCCCATAGAATCTAGTTTTAAACTCAGCGTAAAAAAAGTCACCAGGTCACAAATAACTGCACAGATTAAGTAGAGAAGACAGCTGGAGTAAAACCAATAGCCGTTATCAATTTTCAGAATCTGCGACTGCTTGTATGGTTGAAACGGGCAAAGTCTGTTCTTTTGTGGATATGGATACAAGTCACTATCTCCCCTTTCGCCACTTTTGGTTGTTTAATCATAATGAGCCTCCTCCACCAATATAATGACCTTTTTTTTGAGATACCACCAAACCATATAGTGATCTTATTGAGACTGTTCTACCTTCCTCATCACAGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTAAGTTGCCAATAACTAGTAAGAATAGTCATTATCTAAAAAAAAAACTAGTAAGAATAGTGTTTATCAGGTGTCATCAGATTTGGCTGTTCCCATCACATAAAATTCGTCCGCCTTTTGATTTGTAGGTACAACAGGATTGCTCCAATTGTGGGGCATGCTTGGGTAAATATTTCTGCGCAAAATGCAACTTTTATGATGACGATGTAAGCACATAAAGAACATTTGAACCTTGTGCTGTTAATGAAACTAAATAGCATTTTGATTATATTTTTTGGGTGGTATTTCTGTTCTTTTCTCTGACTTGCGTGGCTCTCGCTCTTGTTCCAGGTATCAAAGAACCAATTTCACTGCGATGGATGTGGCATATGCAGGCAAGTTGTGCTAAATCTGCATTCCTGTGACGGAGTAATGAAATATGAGCCCTTTTTGATAAATTTCACCATCACATTTTACAGAACTGGTGGTGCAGAGAACTTCTTTCACTGTGACAAATGCGGTATGTTTAGGGTCGAGTGATTTCATCAATTTCAGATTTTGGTATTAGTAAATATTTGCATTGACAAATATTGTGGTTATCAGGATGCTGCTACAGCTATGTGCTGAAGGATTCCCATCATTGTGTGGAAAGAGCAATGCACCATAACTGCCCTGTATGCTTCGAGGTAAATATTTGTTGTCAGAGAAACCATGGACTCTGAAATTTTCTGTATTCTACTAAAATAAATTCCCTTATTTGTTTCTGTGCTAGTATCTATTTGACTCAACAAAAGACATCAGTGCACTGCACTGCGGACACACGATCCATCTGGAATGCCTATACGAGATGAGATCCCATCAACAGTAAGTAATCACAGATAAGACTTACACCATGGCCTCTCCCAACTGATTACTGACTATGGTGTCAATCTGTGACATTTCGCCAGATTCTCTTGCCCGGTCTGCCTGAGGTCTGCTTGTGACATGTCCCATGCATGGCAAAAGCTTGATCAAGAGGTGCATTTTCCTTCTCCCATTGCACAGCTTATCCATTGACACTGACCATGTACATATACATACATACATACATGCATAGAACACCATCCAAATAACTCTTCACTCAGGTTGCAGCATCGCCGATGCCAGTGATCTATCAGAAGAAGATGGTATGTAAATTCAGTTACTTGTGTTCTTCAGTCCAACCAGGTAACTATACGCTGAACAAAAGTTTTTGTGGTTATTTTGGCTCTGTCAGATATGGATCCTATGCAACGACTGTGGGACGACATCGAACGTGCAATTCCACATATTGGGACACAAGTGCCCCGGATGCAGCTCTTACAACACCCGGCAGACAAGAGCCGCCCCTGCTGCCGCGTGCTCCAGAGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011856