BGIOSGA011876

From RiceWiki
Revision as of 09:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011876| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011876, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011876

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011876, complete gene.

LocusTag

OS03G0152800

Ensembl Transcript ID

BGIOSGA011876-TA

Ensembl Protein ID

BGIOSGA011876-PA

Length

4409

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3361200..3365608

Sequence Coding Region

3361200..3361476,3361721..3361798,3361897..3362561,3362994..3363581,3363662..3363816
,3364156..3364361,3364447..3364580,3364662..3364963,3365193..3365296
,3365538..3365608

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3361200..3365608 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3361200..3365608 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATTTCCTCTACCGGACTTCGCAGCCTGTTGCACCCGAGCTTCCGCGGATTCCAGAGCAAGATCAGCAAAGGGATAGCCTACAAAAGCCAGTTACAACTCTGGAGGGCCTTATTGCCGATGATCCATATCACCCCTCCCCTGAAGATGAAGATACTGATAATGGAGATGTAGATATCGGTGGGGACTCTGCAGATGCAGATTCAAAAAATTCAGTTCCTACTGGAAAGCATACCGATGTTTTGGATGACGAAGGATGGATCACAATTCCGAACAAGGAGCTTCCTGATAACTGGAATGACCTTTCAGACATGTTGCAGTTACAGCCTTTGGACCGCCCCTTCCTTTTTCCTGGTGAGCAGGTTCATATATTGGCGTGCATGTCCGCTTCGAAGCAAGAAACACAGGTCATATCTCCCTTTAGAATTGCTGCCGTGATGTCTAAGAATGGAAATTCTTTGCAATACTCCACAAATAAATCTAGTCATGCCACAGAAAATGGTGATAGTAATGTAAAGAATGGAGAGAATGGTTCCCAGGTTGTTGAGGATGACATGCAAAGTGTTGAACTCAACAGCGAAATGTCTCCTATGACACAAGATGACATGCAAAATGTTGAGCTCGACAACGAAATGTCTCCTTCAAAACAAGATGACATGCAAAATGTTGAACTCAACAACGAAATCTCTCCTTCAAAACAAGATATTTTGGAGACCGAATCTCTCCTTCGATTGGAAGATCACAAGCAACAAATTGAAAGTATGCTTCAAAGATTCAAAATGTCCAATTTTTTTGTCCGAATTGCAGAGTCAGATGAACCTCTCTGGTCCAATAAAAAACTAGCTGTATCAAAGGTGCCAAAAGAGCAATCATATTCAGACAACCAGGAAAACAATAAGGGTTCAAGGAGTAATGCTTATAATACCATTTCTGATAAAGGAGTTTTTGATGGTAGCACATCTGGAGGAATCGCTCGTGGTACAGCAAGGTGCTATGCTCTGCAAAATGGAGACATCGTGGTTGTTTTGCAAGTGAATGTTGGTGTTAACAAAATGGAAGCTCCAGTGCTAGAAGTTCTTCAATTTGAGAAATCTTCATCAAGCAATTATATAACCAAGAATCTGGTCAATAGACTTTCTAGTGGTGATGAGGATCCATGTCAGGAGCTGCTAAGCTGGCTGCTCCCTTTGGATCGCACACTTCCTCCGCGATCCTTATCACCTCCTACTCTCAATCCTAGTGCATCACACAAGCAATCTTATTCTGCTTCTGGTTCTCAAATTTTTTCATTAAGTCACTTCAGAAGCTATTCCATGCCTTCAGCCTCCTCCACTCAACCACCCAACATTAGGCCACCACCAATTTCTGAAAGTCAAGAATTTGTGCCTGAAAAGCCTGCGAAAACACCTGATATTATAAATGATGGACAACTTTCCTTTAGAGGAGTTCCATTGGAGCCTGAACGGTATTCCGTACGTTGTGGTCTAGAAGGTGTATATCTACCAGGGAAAAGATGGCGGAGAAAAGTTGAGATCATTCAACCAATTGAGGTTCACTCTTTTGCCGCAAAATGTACTTCGGAAAATCTTCTGTGTGTTCTAATCAAGAATATTTCTCCACACCATGTGAAAGATATAGTTGTATTGGTAGATGCAATTACAATTGTCTTTGAGGAGGCATCCAAAGGAGGTGCTCCTTTGTCACTCCCAATTGCCAGTATTGAGGTTGGGCACGGGCATAGCTTACCAAATCTTGCACTCAGGAGAGGCGAGGAGCACTCTTTTATTCTCAAGCCAGCAACTATGTCGTTTAGGGACCGGAGGACCAACAATGATGCACCTCTGACTTTGTCACTCCCTAAGATGAATGGAACTGCCACAAATGTTTCTTTGCCTAAGGTTGGCGAGACCATTGGCTCTCTTATGGATCAGTATGCTGTACTTGTATCATATCGCTGCAATTACACAGAATCAAAACTTTTCTTCAAGCAGGCCACCAGCTGGCGACCCTGTGTTGCTAGTGACCTTATGATCTCTGTATCATCAGAACTGTCTTTGCGAAATCCTATTTCGAGTGCTCGAGTTCCTCAACTCCCAGTGCAGGTCTTAACCCTTGAGGCTACTAATATGACATCAGAAAACCTTACCGTAACGGTTCTTGCTCCAGAAGCGTCTGGTTCTTCTTCAGTTGTATCCTTGAACTCAGCTCCAACCACGCCAAATAGTTCGTATGACAATCTTAATGAGTCTGTGAGAAGATCTGGCTTGGGTAAACATCGAGCTGGTTTTCGAAGAATGAATTCAGTCCTTGCTGGCTCACCAAAAGAAAGTGACAATGGAGGAAATAGAATTAGCACTTCTGGAGGCTGTACTCATCTGTGGTTGCAGAGTGCGGTTCCTTTAGGGTGTATTCCTGCACGTTCAAGCACCACCGTCAAGCTTGAGCTACTTCCATTAACGGATGGGATCATTACACTGGATACACTTCAAATAACGATAAGGGAGAAAGGTCTTACATACATACCAGAGCACTCCTTGGAGATATATGCGTCAGCTGCCAATTCAACGGGAAGTTCATAG</cdnaseq>

Protein Sequence

<aaseq>MNFLYRTSQPVAPELPRIPEQDQQRDSLQKPVTTLEGLIADDPYHPSPEDEDTDNGDVDIGGDSADADSKNSVPTGKHTDVLDDEGWITIPNKELPDNWNDLSDMLQLQPLDRPFLFPGEQVHILACMSASKQETQVISPFRIAAVMSKNGNSLQYSTNKSSHATENGDSNVKNGENGSQVVEDDMQSVELNSEMSPMTQDDMQNVELDNEMSPSKQDDMQNVELNNEISPSKQDILETESLLRLEDHKQQIESMLQRFKMSNFFVRIAESDEPLWSNKKLAVSKVPKEQSYSDNQENNKGSRSNAYNTISDKGVFDGSTSGGIARGTARCYALQNGDIVVVLQVNVGVNKMEAPVLEVLQFEKSSSSNYITKNLVNRLSSGDEDPCQELLSWLLPLDRTLPPRSLSPPTLNPSASHKQSYSASGSQIFSLSHFRSYSMPSASSTQPPNIRPPPISESQEFVPEKPAKTPDIINDGQLSFRGVPLEPERYSVRCGLEGVYLPGKRWRRKVEIIQPIEVHSFAAKCTSENLLCVLIKNISPHHVKDIVVLVDAITIVFEEASKGGAPLSLPIASIEVGHGHSLPNLALRRGEEHSFILKPATMSFRDRRTNNDAPLTLSLPKMNGTATNVSLPKVGETIGSLMDQYAVLVSYRCNYTESKLFFKQATSWRPCVASDLMISVSSELSLRNPISSARVPQLPVQVLTLEATNMTSENLTVTVLAPEASGSSSVVSLNSAPTTPNSSYDNLNESVRRSGLGKHRAGFRRMNSVLAGSPKESDNGGNRISTSGGCTHLWLQSAVPLGCIPARSSTTVKLELLPLTDGIITLDTLQITIREKGLTYIPEHSLEIYASAANSTGSS</aaseq>

Gene Sequence

<dnaseqindica>1..277#522..599#698..1362#1795..2382#2463..2617#2957..3162#3248..3381#3463..3764#3994..4097#4339..4409#ATGAATTTCCTCTACCGGACTTCGCAGCCTGTTGCACCCGAGCTTCCGCGGATTCCAGAGCAAGATCAGCAAAGGGATAGCCTACAAAAGCCAGTTACAACTCTGGAGGGCCTTATTGCCGATGATCCATATCACCCCTCCCCTGAAGATGAAGATACTGATAATGGAGATGTAGATATCGGTGGGGACTCTGCAGATGCAGATTCAAAAAATTCAGTTCCTACTGGAAAGCATACCGATGTTTTGGATGACGAAGGATGGATCACAATTCCGAACAGTATGTGCCCTTTGACTTGCCCGTCTTTATTTTCATTTAAAGTCATTACTGGTTAATAAGAATCCATTTGTTAGGAATATCTCTACAAGATCTGCTAAATGTTCTAAGGAAATCCATATTTTTCTGAAAATTTTCCTTTTGAAGTGCCATGGAACATAGGTCATGCTTTTAGAAGTGCCATAAGCTTGTAACAATTAATCCTCTTACATCTATGGTCAGTAACATCTTCAATTTACTTCCACAGAGGAGCTTCCTGATAACTGGAATGACCTTTCAGACATGTTGCAGTTACAGCCTTTGGACCGCCCCTTCCTTTTTCCTGGTAAATGCATTTTTCCTATGACTTTAGTCTAGGGGGTCTGGCACAAGTGCATCATGATTCTGCCTGTTTTCTAGAATCTGAACTAGTTCAGTTATCAGGTGAGCAGGTTCATATATTGGCGTGCATGTCCGCTTCGAAGCAAGAAACACAGGTCATATCTCCCTTTAGAATTGCTGCCGTGATGTCTAAGAATGGAAATTCTTTGCAATACTCCACAAATAAATCTAGTCATGCCACAGAAAATGGTGATAGTAATGTAAAGAATGGAGAGAATGGTTCCCAGGTTGTTGAGGATGACATGCAAAGTGTTGAACTCAACAGCGAAATGTCTCCTATGACACAAGATGACATGCAAAATGTTGAGCTCGACAACGAAATGTCTCCTTCAAAACAAGATGACATGCAAAATGTTGAACTCAACAACGAAATCTCTCCTTCAAAACAAGATATTTTGGAGACCGAATCTCTCCTTCGATTGGAAGATCACAAGCAACAAATTGAAAGTATGCTTCAAAGATTCAAAATGTCCAATTTTTTTGTCCGAATTGCAGAGTCAGATGAACCTCTCTGGTCCAATAAAAAACTAGCTGTATCAAAGGTGCCAAAAGAGCAATCATATTCAGACAACCAGGAAAACAATAAGGGTTCAAGGAGTAATGCTTATAATACCATTTCTGATAAAGGAGTTTTTGATGGTAGCACATCTGGAGGAATCGCTCGTGGTACAGCAAGGTGCTATGCTCTGCAAAATGGAGACATCGTGGTATGAATGATCCTTCTGTTTAGTTACTGGGTGATACTATAACTAGAACTTTTGTATAATGTATGCACATTGGAAGTTTACTTATGAGCACTGCATAAATAATTGCAAGTTGGATGCTTTAATCATAATAACTTCACCAGGCATAAACATGGTAGACTGTTCTCATGTGCTACCTATTTGCGTCAGTCTTAGCAGATTGACATAAATGGCTAATACCTCATGCCCATGCCTTTTAGTACTCTCTTCATTTTCTGCAACTTTATAAATCACGGCATTGAGCAATGTTCTGAGATCTTTAGAAGTCATATAGAATTACCTTCGGTGAAATCCCCTTTTTCAGAAAGAAAGGAAGCACACGTGTATCTGTTGATTAATTTTAGATGTTATACATATGCTGATTAATCACTCATGTTCTTTGTTGGAAGGATGCAGGTTGTTTTGCAAGTGAATGTTGGTGTTAACAAAATGGAAGCTCCAGTGCTAGAAGTTCTTCAATTTGAGAAATCTTCATCAAGCAATTATATAACCAAGAATCTGGTCAATAGACTTTCTAGTGGTGATGAGGATCCATGTCAGGAGCTGCTAAGCTGGCTGCTCCCTTTGGATCGCACACTTCCTCCGCGATCCTTATCACCTCCTACTCTCAATCCTAGTGCATCACACAAGCAATCTTATTCTGCTTCTGGTTCTCAAATTTTTTCATTAAGTCACTTCAGAAGCTATTCCATGCCTTCAGCCTCCTCCACTCAACCACCCAACATTAGGCCACCACCAATTTCTGAAAGTCAAGAATTTGTGCCTGAAAAGCCTGCGAAAACACCTGATATTATAAATGATGGACAACTTTCCTTTAGAGGAGTTCCATTGGAGCCTGAACGGTATTCCGTACGTTGTGGTCTAGAAGGTGTATATCTACCAGGGAAAAGATGGCGGAGAAAAGTTGAGATCATTCAACCAATTGAGGTTCACTCTTTTGCCGCAAAATGTACTTCGGAAAATCTTCTGTGTGTTCTAATCAAGGTTACGCGAACATCCCTAACCATTAATATCTCCTACTTAGAGAAGCTTTCAAACCTAATGCTTCTATCTTCAAATTTCAGAATATTTCTCCACACCATGTGAAAGATATAGTTGTATTGGTAGATGCAATTACAATTGTCTTTGAGGAGGCATCCAAAGGAGGTGCTCCTTTGTCACTCCCAATTGCCAGTATTGAGGTTGGGCACGGGCATAGCTTACCAAATCTTGCACTCAGGTATATGCAATTTCTCATTGATTTCACTCTCTATCCACCATTTCAGCTTTATGCAAAGAAATTGATTGGTTCAATTCCCCCTCGGGGTCCATCAAATCCAGGAGTTTGAGTTTGGCCTCAAACAAGTTGGTCTTGTATGGCCTAGAGCCCTAGAGTACTGGGTTAGTCAAAGCAGGACTGGATTAATTCCACATTTCCCTTTTACTTTCACCAGATTCAAGTATATGCTAGTAGTAATAAACATGGTTGTATGTTGAGTATTTCTTACTCTAAACATTGAAGTTTATGTCAGATTCTAGAATATTCCATCTTTCTTAAATGTTACCTTTTCCTTTCCAGGAGAGGCGAGGAGCACTCTTTTATTCTCAAGCCAGCAACTATGTCGTTTAGGGACCGGAGGACCAACAATGATGCACCTCTGACTTTGTCACTCCCTAAGATGAATGGAACTGCCACAAATGTTTCTTTGCCTAAGGTTGGCGAGACCATTGGCTCTCTTATGGATCAGTATGCTGTACTTGTATCATATCGCTGCAATTACACAGGTAAACTACTTAACAGATGGGGGTAAGTGACTTGGAAGAAGCGTTGAATTGTTATTTCTGACTTCCAGCCTTCTTTCCTGTGTAGAATCAAAACTTTTCTTCAAGCAGGCCACCAGCTGGCGACCCTGTGTTGCTAGTGACCTTATGATCTCTGTATCATCAGAACTGTCTTTGCGAAATCCTATTTCGAGTGCTCGAGTTCCTCAACTCCCAGTGCAGGTAATTCCTACGCTTTTTTAGGTATATTATGCAGATTATCCATGTTTCATTTTGATAGTGCAATCCACTGTTACCTTCCAGGTCTTAACCCTTGAGGCTACTAATATGACATCAGAAAACCTTACCGTAACGGTTCTTGCTCCAGAAGCGTCTGGTTCTTCTTCAGTTGTATCCTTGAACTCAGCTCCAACCACGCCAAATAGTTCGTATGACAATCTTAATGAGTCTGTGAGAAGATCTGGCTTGGGTAAACATCGAGCTGGTTTTCGAAGAATGAATTCAGTCCTTGCTGGCTCACCAAAAGAAAGTGACAATGGAGGAAATAGAATTAGCACTTCTGGAGGCTGTACTCATCTGTGGTTGCAGAGTGCGGTTCCTTTAGGGTATTGATCCTCACCTGCTTTTCTTTCTTTGAGTGACACATCCCATGTACCTTGTATTCCCTCCGTCCCAAAATAAACCAATCTCGTACTGGATGTGCCACATCCTAGTACGATATGTCCAGATTCATTGTACTAGGATGTCACATCCCGTATGGGGTTAGTTTATTTTGGGACGTAGGGAGTATTTCTATACACTAAAGAATAACATTTGTTGTCACCATTGTGGTAGGTGTATTCCTGCACGTTCAAGCACCACCGTCAAGCTTGAGCTACTTCCATTAACGGATGGGATCATTACACTGGATACACTTCAAATAACGATAAGGGAGAAAGGTATACTTTTTCTTGCAAGCATAGTAAAAACACAGAGAAAGAAAAACAAATTAGTGGCATTGGAGGAACACTTTTTTTTTTTAACAATCTGTCACAATGTGAATATCCTAGATTCCTTAGGATGTTGACATATAATTATTTCCTGTTGGAATTGATTGTAAAAAAAGAAAGAAGTATGTAGACTATAGTGGAATTTATTCCATGTTTCCTGCTTGTTTTGTTTGATATCTTTCTACTACAGGTCTTACATACATACCAGAGCACTCCTTGGAGATATATGCGTCAGCTGCCAATTCAACGGGAAGTTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011876