Os09g0381100

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0381100| Description = Xanthine/uracil/vitamin C permease family protein| Version = NM_001069593.1 GI:115478928 GeneID:4346932| Length = 44...")
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Gene Name

Os09g0381100

Description

Xanthine/uracil/vitamin C permease family protein

Version

NM_001069593.1 GI:115478928 GeneID:4346932

Length

4454 bp

Definition

Oryza sativa Japonica Group Os09g0381100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13488782..13493235

Sequence Coding Region

13489582..13489684,13490223..13490320,13490481..13490657,13490769..13490869,13490965..13491040
,13491127..13491186,13491272..13491456,13491540..13491636,13491741..13491827
,13491915..13491973,13492079..13492170,13492283..13492360,13492462..13492622
,13492729..13492947

Expression

GEO Profiles:Os09g0381100

Genome Context

<gbrowseImage1> name=NC_008402:13488782..13493235 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13488782..13493235 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcgccgccgcccaaggccgacgagctgcagccgcacccgcccaaggaacagctcgccagcgtgtccttctgcatcaccagccctccgccatggcccgaggccattatattaggattccagcatttcattgttatgctgggcaccactgtcatcataccgagtgcacttgtacctcagatgggaggaggaaatgatgaaaaagctcgggtaattcagacgctgttgtttgttgccggaataaacaccttgttccaaacattcttcgggtctcgtctccccgttgtgatgggtggctcatacactttcgtcgcaccaaccatctcgatcattctggctggacgttacaacaatgaagcagaccctcgtgagaaattcttacggaccatgaggggaacacaaggtgctctcatcatcgcgtcgacgattcagatgatacttggtttcagtggtctctggcgcaatgttgttaggttgttgagtccattgtctgcggttcctcttatttcacttgttggatttgggctttatgagcttggttttccaggggtagctaagtgtgtggaaattggtcttccagaactcatcctacttgttgcattttctcagtatttgcctcaagtgttacattttgggaagcctatctttggccggtttggtgttcttttcaccgtttcgatagtgtggctttacgcgtacattctcacaattagcggtgcttacaagaatgctccaccaaagacacaggtgcattgccgtgttgatcgctcaggccttatttcaggagctccttggattagagttccttatccctttcagtggggagctccaacttttgatgctggtgaagcctttgcaatgatgatgacttcatttattgctcttgtggagacaactggagctttcattgctgcttcaaggtatgcaagcgcaactatgatacctccatcaatcattagtcggggcatcggttggcagggaatcagcatcttgattgattctttttttgggacggccaatggaacctcagtttcagtggagaatgttggtttactcgctttgacacatgttggcagcaggagagtagtgcaaatatctgctggtttcatgatcttctttgctatccttggaaaatttggagcacttttcgcatccattccattgcctatatttgcgggcatgtactgtattttcttcgcttatgtcggtgcctgtggtttgagtttccttcagttttgcaacctaaacagcttcaggaccaaattcatcttgggttttgctttcttcatggggatctcagttcctcagtacttcaatgagtacacagctgttgcaggttatggaccagtgcacactggtgccagatggttcaatgatatgataaacgtgccgttctcgtcgaagccgtttgtcgcgggtcttgtggcctacttcctcgacaacacgatcgagacgcacaataacacggtgaggaaggatagaggctaccattggtgggacaaattcaggagcttcaagaaagacgcgaggagcgaagaattctactcgttaccgttcaatctgaacaagttcttccctgctgtctga</cdnaseq>

Protein Sequence

<aaseq>MAAAPPPKADELQPHPPKEQLASVSFCITSPPPWPEAIILGFQH FIVMLGTTVIIPSALVPQMGGGNDEKARVIQTLLFVAGINTLFQTFFGSRLPVVMGGS YTFVAPTISIILAGRYNNEADPREKFLRTMRGTQGALIIASTIQMILGFSGLWRNVVR LLSPLSAVPLISLVGFGLYELGFPGVAKCVEIGLPELILLVAFSQYLPQVLHFGKPIF GRFGVLFTVSIVWLYAYILTISGAYKNAPPKTQVHCRVDRSGLISGAPWIRVPYPFQW GAPTFDAGEAFAMMMTSFIALVETTGAFIAASRYASATMIPPSIISRGIGWQGISILI DSFFGTANGTSVSVENVGLLALTHVGSRRVVQISAGFMIFFAILGKFGALFASIPLPI FAGMYCIFFAYVGACGLSFLQFCNLNSFRTKFILGFAFFMGISVPQYFNEYTAVAGYG PVHTGARWFNDMINVPFSSKPFVAGLVAYFLDNTIETHNNTVRKDRGYHWWDKFRSFK KDARSEEFYSLPFNLNKFFPAV</aaseq>

Gene Sequence

<dnaseqindica>801..903#1442..1539#1700..1876#1988..2088#2184..2259#2346..2405#2491..2675#2759..2855#2960..3046#3134..3192#3298..3389#3502..3579#3681..3841#3948..4166#agtcgcgtctgcatacaggtcatccatctctctcactctgcctcgccgggaagcagcagcgagcgaagtagtaggcgagagaatccgagcgaggaagaaagcccgagccgaggagcgctttaaagcgggaagaagaaagaaagcgcgcgagtaaagaaaagggaggaggaggaggaaagagagccgtcgttttcgttctcctctgcttcgcctcggccacgctgcggccacctcctttctgccacggcaaaagcctcctcgggatgctccactgatcgtcttctacttactcctctttcttccagcttggccggcgtgtggctgattattccagaatttccattagcttaatcaccggatcaagaagaatgagagaaaggggggagaggctcttttctgtgggatgacagattccgttttgtaggagcagcgcaccatttcagatttcttcctcctcctcttcttctttccgttgtgcttgctgcttttctctactaccttttccactgttgcgaagtcgggttggtgggtggttgattgattgttctttccttcctcgtgagggttcttgcttcttggcttcttggccgcttcttgagttggggctagctggttcttttgctgtctctgtcccgtcaaactgaagcgagcgagagattgaccgggtgggtgattcttcttcgaggagcttcttcttggagctcgtgagagtggagtgatcgaggtggtggtgtgagagcagtagacaggtttttcttggggagcttggaggtagccggagttgggggaggaggaggaggatggccgccgcgccgccgcccaaggccgacgagctgcagccgcacccgcccaaggaacagctcgccagcgtgtccttctgcatcaccagccctccgccatggcgtacgtgcgctctgcttctctacttcacttcagggtttcttaatttttctgatctcgagttctcgattgctgcttaaagtgttctttgtgatttgtcctttcgtgttgttttttgtccatgcttttgtttggttgatgcttgagtttttcatcggtggatacgtgtggtgatcatctgtttatgtgaaagtggaatgttttagtactgaacttttggcctacttttggtttgatgctgatgcttttgcgtataaaattgtgtattagtttgtacgacatgcttttgttcttcttttctctcgttagttctagtattttcttactttgctcagctgaggaaaaggagacttttgattaactagtctataaagattaagttcaccttttaaagttttaatccatcataaaaagggttttgaattgcaaattctttatgcagttgcctagcagtaaactgtgtgtatgttcagttcagagatgtgttcaagtatatatgctattttttttctctgaacttgttatcttatcttatatgcagccgaggccattatattaggattccagcatttcattgttatgctgggcaccactgtcatcataccgagtgcacttgtacctcagatgggaggaggaaatgtgagtcccaaaacttatgtgttacagtacatctcttagttctattcacttgcttgacaattgatttcagtactactgaagatttatcagtgttaatttacacaaaaaaaaattgaacctctacatgctgaatatctgaataattgcttctttatatcaggatgaaaaagctcgggtaattcagacgctgttgtttgttgccggaataaacaccttgttccaaacattcttcgggtctcgtctccccgttgtgatgggtggctcatacactttcgtcgcaccaaccatctcgatcattctggctggacgttacaacaatgaagcagaccctcgtgaggtagtgcccagtggttttggtcttcggattagcggtgtctctgtctatttatgacatttttttttgtgggggggtgaaagctaacatttttctgctgttgttgttgtaaagaaattcttacggaccatgaggggaacacaaggtgctctcatcatcgcgtcgacgattcagatgatacttggtttcagtggtctctggcgcaatgttgttaggttggtatggttttggtctttatttgattgaagctagagctgtgtcgtgtagagttttgatttttgcaattaactgtcctgtattatttttgcaggttgttgagtccattgtctgcggttcctcttatttcacttgttggatttgggctttatgagcttggttttccaggggttagtagttctgctccttctatttttttatgtttttaaatcctgaatataccttcatgtttttttttttggaaaaatggatgcaggtagctaagtgtgtggaaattggtcttccagaactcatcctacttgttgcattttctcaggtattaatgttactttactactctctgcatagtcagagcaatagtaacatattttacatactgatcatgtttgtattcttgatagtatttgcctcaagtgttacattttgggaagcctatctttggccggtttggtgttcttttcaccgtttcgatagtgtggctttacgcgtacattctcacaattagcggtgcttacaagaatgctccaccaaagacacaggtgcattgccgtgttgatcgctcaggccttatttcaggagctccttggtaggattctagaataaccatagtattattccgtgcttttatttcgatggaaatccttacaaggtgttgattttttattgtaggattagagttccttatccctttcagtggggagctccaacttttgatgctggtgaagcctttgcaatgatgatgacttcatttattgctcttgtggaggttggtctgcagtacttaatcaagaatagaaagaaaaggctatgctagcatgcattctaagctatccatttagaagtaataatatgataaaattttgcctgtagacaactggagctttcattgctgcttcaaggtatgcaagcgcaactatgatacctccatcaatcattagtcggggcatcggttggcaggtaagtgaatcaattgtgccttttgtaccatagaatttgtcccatcttcaatttgttacattgattatcctaaaacattatcttcagggaatcagcatcttgattgattctttttttgggacggccaatggaacctcagtttcagtgtaagtatagcgttagtggataattagaaccgtcaatccttgattgctcagatagttcctttttttccctttttctaactgggagtgtgaatttggtattcacagggagaatgttggtttactcgctttgacacatgttggcagcaggagagtagtgcaaatatctgctggtttcatgatcttctttgctatccttggtaattctgctcatgtccttatagctatcttaacatattttttttgttgtgtagaagtcattttctctgccacacttggctaggctaattataaattattttgatgaaccaggaaaatttggagcacttttcgcatccattccattgcctatatttgcgggcatgtactgtattttcttcgcttatgtcggtaggttgagatgcctgaatcaaataaacatcagttccttcatctgataattctcaacatattattccgctgtaatgattcactgttccttccatgcgcaggtgcctgtggtttgagtttccttcagttttgcaacctaaacagcttcaggaccaaattcatcttgggttttgctttcttcatggggatctcagttcctcagtacttcaatgagtacacagctgttgcaggttatggaccagtgcacactggtgccagatgggtatgagaaatactacatcctacagaatcctcctttttttttcttcatagcttgttctttgttctgatcacttgatgataatctttgctctctctttttttttcagttcaatgatatgataaacgtgccgttctcgtcgaagccgtttgtcgcgggtcttgtggcctacttcctcgacaacacgatcgagacgcacaataacacggtgaggaaggatagaggctaccattggtgggacaaattcaggagcttcaagaaagacgcgaggagcgaagaattctactcgttaccgttcaatctgaacaagttcttccctgctgtctgaatgatctagcaaatgtcacccaagcaaaaatggttcatgtctgaacataattctgctggccttcttcagtgttgctgtgcgtcagttttgtgtacttataataggcgaatcttactaattggacaacggagatgtgccttagaatgggaatatcatgtctatttttttgtcctacaatgatttatgtgtcattacctaggtctttctcttatcaagttgtcaatgacccaatgtacatgtggcttttctatcggatagtattagtatcacatttaacaatatgacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0381100, RefSeq:Os09g0381100