BGIOSGA011895

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Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011895| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011895, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011895

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011895, complete gene.

LocusTag

OSJNBA0011L14.3

Ensembl Transcript ID

BGIOSGA011895-TA

Ensembl Protein ID

BGIOSGA011895-PA

Length

3811

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3575087..3578897

Sequence Coding Region

3575087..3575193,3575747..3575981,3576070..3576177,3576253..3576422,3576851..3576984
,3577100..3577271,3577404..3577956,3578080..3578192,3578296..3578539
,3578679..3578897

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3575087..3578897 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3575087..3578897 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCGGCGGCGGGCGGCGGCGGCGAGCCTTCGCCGGCGCCGGGAGTGGGCGGCCGGAAGCACCTCTCCTCCATCGCCAACCACGTGCTCCGCCAATGCTCCCTGACATTGGACAGAAGTGTTGATGAATTAGTTGCAGACTTTGAGCTCGGTTTGAAGACTGCTGCGGTGGATAATTATTCAAGAAGACTTGTCGAGTTCTGTATCCTTCAGGCGCTGCAAGTTGTTACATCTGTTGATCTAGGAGACAAGATCCATGATGGATCGCTTAGTCGGTTCACATTTGATATGATGCTGGCTTGGGAAACACCCACTCCTTCAGATCAACAAGTTACCATGGAGAGCATAGCTAAAGAAAGAGAGGATAAGAAGGAGCCGCTCGGAGCAAATGAAGCTGTCATGGGCGATGAGACCTCACTGTTCTATTCAGATATCATGCCTCTTCTCGTGAATGAAGAACCAACAGTTGGAGAAGATGCATATGTGTGGTTTGGATCTGTATTTCCTTTGGCGTGCGATGTTATCAATGCTCGATTCACCTTTGAAGCCTTGACTGCTACAACCGCTAATAGGCTTCATTATCCTGCTTACGACAAATTCCTGAAAGAAATGGACAAGTCTTCCGAATTCTTGCAGAAGGTGTCAACTCCAACCGGAACTGAACTTGCTGAAGATGAATTCATCTTGCACATAGAGGGAACAGCAGGAACACAAAGGGTGGTGCGGCACATTGGAACCACTAGTTGGCCAGGCAGGCTGACTCTGACAAACAAGGCATTGTATTTTGAGGCTTCTGGGAAAATTTCATACGAACCTGCTTTCAAAGTCGAACTTACAGGCAGTGAAATAGGAAAACAAGTTAAAACTACTTCAACTGGTCCTTTTGGTGCACCATTGTTTGACAAAGGCATCGAATTTGAACTACCAGAACCTTTGGTTTTGGAGTTTCCTGAGATGACCAGCTCAACAAGGCGCAATATGTGGCTTACCCTGATAAGGGAAGTAATATTCCTTCACCGATTCATATCAATGTACAGCGTAGACTCCCCCATTCACAAATGGGAGGTGCATTCGAGAATCATATTGGGGGTGATAAGGCTTCATGCTGCAAGAGAGATGCTAAGGATGTCGCCACCGCCTCCTTCTAGCTTCCTAGTATTCTCGCTTTACGATGAGCTTCCTAAAGGTGATTTTGTGCTTGAACAACTAGCAAATAATCTGAAAGAGACGTCAACGATAACTCCGCTCAGTGCATCCCATGTGTTCAAGGGTTTGAGCAAGTCGCATCGGGTAGCTTTAAGTGCGGAGATAGCAAAAGAGCATGACAAGGACTCAAATAGCCATGAACAGCCCTTGGCATCACTTGAAAACACTATCGGTCAAGTAAGAGACGAGGCTCGGGAAGTCACCGTCGCTAACGTTGCTATCGAAGGAATGAAGGAGGAAGGTATCACTGATAGCCTTCTTGTACTGGTGGGGTTAGTAAGCCCCATGAGCAAATTGTTTCCAGTGATCCAAAAGATAATCTCATGGGAGAAACCACTTGTGACTATCAGTGTCCTTGCCATGATGGTGTTAACCATATACAGAGAGTGGGTCGGTTTTGCGTTAGCGGCATCCTTGATACTGGCAGCAGGATTCATGGTTTGGGCTAGACAAAGAAAAATCGGTGCACTATGCTCAGAGGTGATCATCGACACTTCATCGGACAAGACGACGATGGAAAGCCTAGTGGAAGCACAGCAAAGCCTGAAAAGAGTGCACGAGTACATCAAGACAGCAAATGTCGTGATCCTCCGAGTATCGTCGATCGCGTTAGCGAGGTCACCAAAGCATACAGAAACGGTGATATGGATGCTGACAGGGTTGGCGCTGGCGCTGGCCGTGATCCCGTTCAAATACGTCCTGATCGGGGTGATGGCCGGCGGCTTCATGTCGAACACGAGGATCGCGAGAGCCATGTCGAACCCGCAGGGAAGCCGGCGGTGGAGGGAGTGGTGGGAGAGCATACCTGCCGTCCCAGTTCGGGCGGTTGACAGGGGTGGTCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDAAAGGGGEPSPAPGVGGRKHLSSIANHVLRQCSLTLDRSVDELVADFELGLKTAAVDNYSRRLVEFCILQALQVVTSVDLGDKIHDGSLSRFTFDMMLAWETPTPSDQQVTMESIAKEREDKKEPLGANEAVMGDETSLFYSDIMPLLVNEEPTVGEDAYVWFGSVFPLACDVINARFTFEALTATTANRLHYPAYDKFLKEMDKSSEFLQKVSTPTGTELAEDEFILHIEGTAGTQRVVRHIGTTSWPGRLTLTNKALYFEASGKISYEPAFKVELTGSEIGKQVKTTSTGPFGAPLFDKGIEFELPEPLVLEFPEMTSSTRRNMWLTLIREVIFLHRFISMYSVDSPIHKWEVHSRIILGVIRLHAAREMLRMSPPPPSSFLVFSLYDELPKGDFVLEQLANNLKETSTITPLSASHVFKGLSKSHRVALSAEIAKEHDKDSNSHEQPLASLENTIGQVRDEAREVTVANVAIEGMKEEGITDSLLVLVGLVSPMSKLFPVIQKIISWEKPLVTISVLAMMVLTIYREWVGFALAASLILAAGFMVWARQRKIGALCSEVIIDTSSDKTTMESLVEAQQSLKRVHEYIKTANVVILRVSSIALARSPKHTETVIWMLTGLALALAVIPFKYVLIGVMAGGFMSNTRIARAMSNPQGSRRWREWWESIPAVPVRAVDRGGL</aaseq>

Gene Sequence

<dnaseqindica>1..107#661..895#984..1091#1167..1336#1765..1898#2014..2185#2318..2870#2994..3106#3210..3453#3593..3811#ATGGATGCGGCGGCGGGCGGCGGCGGCGAGCCTTCGCCGGCGCCGGGAGTGGGCGGCCGGAAGCACCTCTCCTCCATCGCCAACCACGTGCTCCGCCAATGCTCCCTGTGCGTACTTTCTCTAATCCTAAATCCTAATCAAACCCTGTTGATGGTTGATTTCTCCATCGTGTAGAAACTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGTGTGTAGAAACTGTTGCTATCAATTCGAAAGAAACTGGCAGTGTTTTCCTTGTAGCAGACTCATGTGCTTTGATCTTGTACGAACAGAACATATTGGTATGAAGCTTCACTACTTGAAATGAAGCCGGATTACATGTTTGGGCATTTTATTTGACCGCACAAACTGCTTCCAAATTAAACCTCTAGCGCGTCAGTTCTTCATTAGTAACTATACCCTGTATTTGCTAAACGTCTCTAGTTCTCTGATCCATATGTCCAAAACAATCTGAATACTATAATTTCTAACCATGTCACTGTAACCATGTCCTGATACCATTAGTAATATATTATAGCAATTATGCTATTCGGTGCATGATTCATACGTAATCCTTATAGCTCGTCGGGAGTCAGGACTCAGGACTAGAAATGGCAAGAGTAACTAATACGGGGTCATGGCTTAATTACAGGACATTGGACAGAAGTGTTGATGAATTAGTTGCAGACTTTGAGCTCGGTTTGAAGACTGCTGCGGTGGATAATTATTCAAGAAGACTTGTCGAGTTCTGTATCCTTCAGGCGCTGCAAGTTGTTACATCTGTTGATCTAGGAGACAAGATCCATGATGGATCGCTTAGTCGGTTCACATTTGATATGATGCTGGCTTGGGAAACACCCACTCCTTCAGATCAACAAGTTACCATGGTTTGTGATTTTTTTATATTTGTGTGAAATTGTGTGTTTGTGTTCTTCTGAAATCTGATCTAAACTGACCAATATGGTGACATTACAGGAGAGCATAGCTAAAGAAAGAGAGGATAAGAAGGAGCCGCTCGGAGCAAATGAAGCTGTCATGGGCGATGAGACCTCACTGTTCTATTCAGATATCATGCCTCTTCTCGTATGTTAACACATAGCTGATTAAATTCCTTTCCGTAAAATTTCTTCAAGCTATTCATCGGTAATGATGTTTCAGGTGAATGAAGAACCAACAGTTGGAGAAGATGCATATGTGTGGTTTGGATCTGTATTTCCTTTGGCGTGCGATGTTATCAATGCTCGATTCACCTTTGAAGCCTTGACTGCTACAACCGCTAATAGGCTTCATTATCCTGCTTACGACAAATTCCTGAAAGAAATGGACAAGTATGCAACCACTTCACAGTTAGATCTTTTTTGCAAACATAAGCAACATTGCATTTCCTCTGTTTTTTAATGGATAACTCCATTGACTTTTGATGTGATATTTGACTATTCGTCTTATTCAAAACAGTAGTGCAAATATGCAAAAAAATTTAAGTCAACCTTAAAAGTTTTTAATGATAAAACAAATCATAACAAAATAAACGATACTGATATAATATTTTTGAATAAGACAAATGGTCAAATGGAATGCCAAAAGTCAACACTTTCATACCTCCCTGCTAGATGTCGTTCTTCTTCTTTTTTTTTAACAAACTGGTAGAACTGCAAATTATACTGATAAAGCATGAGAAAATGATACAAAATATAGAACACTGACCACCAGTCCACCACATCCTGATGGATGCCATGTGAAATTGACTTTTTTTTAGGTCTTCCGAATTCTTGCAGAAGGTGTCAACTCCAACCGGAACTGAACTTGCTGAAGATGAATTCATCTTGCACATAGAGGGAACAGCAGGAACACAAAGGGTGGTGCGGCACATTGGAACCACTAGTTGGCCAGGTCATCAATCTGATCAAGAGTTATATTATTTCTGGTTTCTTCAGGTCTTAGCATTTTACGTTGATGCTTTGGTAACATTTGCTTATGAATGCTACATTGGTTGTATACTATACAGGCAGGCTGACTCTGACAAACAAGGCATTGTATTTTGAGGCTTCTGGGAAAATTTCATACGAACCTGCTTTCAAAGTCGAACTTACAGGCAGTGAAATAGGAAAACAAGTTAAAACTACTTCAACTGGTCCTTTTGGTGCACCATTGTTTGACAAAGGCATCGAATTTGAACTGTGAGTTCCCTCTTGCATTTCTTATTTTTGTGTTCATATGGACAACCTACACGGATCAATTCTTTTTGTTATTAAAATTAGCACTTTGCCCCTTTTGCAAAGAATATCGACAGTAACCATTCATCTATGCAGACCAGAACCTTTGGTTTTGGAGTTTCCTGAGATGACCAGCTCAACAAGGCGCAATATGTGGCTTACCCTGATAAGGGAAGTAATATTCCTTCACCGATTCATATCAATGTACAGCGTAGACTCCCCCATTCACAAATGGGAGGTGCATTCGAGAATCATATTGGGGGTGATAAGGCTTCATGCTGCAAGAGAGATGCTAAGGATGTCGCCACCGCCTCCTTCTAGCTTCCTAGTATTCTCGCTTTACGATGAGCTTCCTAAAGGTGATTTTGTGCTTGAACAACTAGCAAATAATCTGAAAGAGACGTCAACGATAACTCCGCTCAGTGCATCCCATGTGTTCAAGGGTTTGAGCAAGTCGCATCGGGTAGCTTTAAGTGCGGAGATAGCAAAAGAGCATGACAAGGACTCAAATAGCCATGAACAGCCCTTGGCATCACTTGAAAACACTATCGGTCAAGTAAGAGACGAGGCTCGGGAAGTCACCGTCGCTAACGTTGCTATCGAAGGAATGAAGGAGGAAGGTATCACTGATAGCCTTCTTGTACTGGTGGTATGTACATTTCTTTTATATTCTCTTTGGTATTTTATCTGCTCAAATCATTTTTATTTAAGCCGGATTGATTTAATCAAACTTCCATTCAACGGTTCTAAGTTCTAACTGTTTTTTATGCAGGGGTTAGTAAGCCCCATGAGCAAATTGTTTCCAGTGATCCAAAAGATAATCTCATGGGAGAAACCACTTGTGACTATCAGTGTCCTTGCCATGATGGTGTTAACCATATACAGGTTAGATTTATACACCGCATTTAATTTCAACATACATTTTACTCTTGGAAACGATCAGGGAACATGAGATGCAAGGTCCCTTTTTTTTTTCAACATGATGCAGAGAGTGGGTCGGTTTTGCGTTAGCGGCATCCTTGATACTGGCAGCAGGATTCATGGTTTGGGCTAGACAAAGAAAAATCGGTGCACTATGCTCAGAGGTGATCATCGACACTTCATCGGACAAGACGACGATGGAAAGCCTAGTGGAAGCACAGCAAAGCCTGAAAAGAGTGCACGAGTACATCAAGACAGCAAATGTCGTGATCCTCCGAGTATCGTCGATCGCGTTAGCGAGGTCACCAAAGGTATCAATATCATCAGAGTTCATCACACACGTTCTCCGATCACCGAATCGTTCCACCGTTGCGATTCATTTCCATGTCATGTTAACGCGTTCCTTCATCATCATGGTGTGGAACTCTGGATAATTTTCTGAGTTTGCAGCATACAGAAACGGTGATATGGATGCTGACAGGGTTGGCGCTGGCGCTGGCCGTGATCCCGTTCAAATACGTCCTGATCGGGGTGATGGCCGGCGGCTTCATGTCGAACACGAGGATCGCGAGAGCCATGTCGAACCCGCAGGGAAGCCGGCGGTGGAGGGAGTGGTGGGAGAGCATACCTGCCGTCCCAGTTCGGGCGGTTGACAGGGGTGGTCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011895