BGIOSGA011896

From RiceWiki
Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011896| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011896, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011896

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011896, complete gene.

LocusTag

OS03G0157800

Ensembl Transcript ID

BGIOSGA011896-TA

Ensembl Protein ID

BGIOSGA011896-PA

Length

5048

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3581401..3586448

Sequence Coding Region

3581401..3581745,3582355..3582510,3583301..3583459,3583563..3583646,3583798..3583877
,3583977..3584027,3584145..3584244,3584524..3584606,3584744..3584789
,3585083..3585170,3585267..3585436,3585575..3585688,3585755..3585862
,3586233..3586448

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3581401..3586448 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3581401..3586448 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGTTCAAAGGCCCAGGGGAGAAGGAGGAGGAGGAGGCCGGGGACAAGGCCGCGGCGGAGGAGGCGGGGGACGGATTCCAGGTGGTGCGCGGTAAGAAGAAGAAGCGGCCCAATGGTGGTTCGGCTTCGGGTGCTGGGTCGGGGACGATGATGGCCAAGGACAAGGCGGCGGCGGCGGCGGCCGCGGAGCCGTGGACGAAGGCGAAGGTGTCTTTCCACGATCCCAACATTCCGCGGCCGCAGGATGTGTACGCAATCAGAGTGAACAACTACAACGTGCCGTTCGACCATGTCTGGCTAGAGCGCACCGAAGATGGCAGCCGCCCTATCCACCCTCTGGAAAAACTGCCAATGGAGCAGTTTATTGACAGAAATGTTCCTGAAAGTGAACCTGTAAAGCCAGCTGATTTGGAGGATACCCCATTTACGCTAGTTGAAGATAAGAATGGTTTAGCAGACTTAGCTAAAAAGTTGAAGAGTGTAAATGAATTTGCTGTTGACTTGGAGCACAATCAATATAGGTCATTTCAGGGTTTGACCTGCTTGATGCAGATTTCAACAAGAACAGAGGATTTTGTTGTAGACACCCTTAAACTTCGCATATACATTGGTCTCTACTTGAAAGAACATTTTAAAGATCCAACCAAGAGAAAGGTAATGCATGGGGCTGATCGTGATATTATGTGGCTCCAACGGGATTTCCACATATATGTTTGCAATCTTTTTGACACAGGACAGGCTTCAAGGGTTTTACAGATGGAGCGAAACAGCCTAGAGCACCTATTGCGTCACTTTTGTGGAGTCACAGCAAATAAAGAATATCAAAATGCTGATTGGAGGTCAAGGCCACTTTCTGATGAAATGATAAAGTATGCTAGAGAAGATACACACTATCTGTTGTATATGTATGACTTGATGAGGTTGAGACTGCAAAAGGAGTCGACATCTGACAATGATCTTCTTCTAGAGGTGCAAAAGCGCAGTAATGAAATTTGTTTACAGTTGTATGAAAAGGAACTGCTGACAGATACATCTTATCTCCACATATACGGGTTGCAAGAACATGACCTGGATGCAAAACAGCTGGCTGTTGTATATGCTCTACATCAATGGAGAGATTATATAGCTCGTGAAGTAGATGAGAGCACTGGTTATGTGTTACCAAATAAGGCTTTAATTGAGATAGCAAAGAAGATGCCTACAGATACTGCAGAGTTAAAAAGAATGGTGAAATCAAAATATCCATTTGTTGATGAAAATCTGGACCAAGTCGTAGGCATCATATGGAATGCAACTGAATCTTCTTATGCCTTTGAAAGCAGAGCTGAACAACTAAAGAAGGAACGTCTGGAGCAGCTAACGGACAGGGTTCAGACTATATCATCACCTGAGATGAAGACATCTATGAACTTATCAGGCCAGATTAGATCAATGGATAAGGAAATACTGAGCGATAACATACATCAGCAGGTGGCACAGGCTACTTTTCAAGAACTGAAGAGACCTATGGCTTTGGGAGCAATAGGGAATTCAACATCCGGGGGACAGAGAGATTTCTTTGGAGGGTTTTCAAATAAGTCTGAGAAGATGGAGAAGGCTAAATCCTATCCAGCCTTTTACTACCCCCAGCTTCCACAATATAGCCCTGAAGTTGGGTACGGCTTTCAATCAATAAACCGAACTATGGCGGGAACAGCACAGTCTCCTACTGGCAATAAGGAGAGGGATCTCCAGAACCCTAGAAGACGTCAATCTTTCCCACCTTCCGGTAACATAAGTGATACACACCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MDEFKGPGEKEEEEAGDKAAAEEAGDGFQVVRGKKKKRPNGGSASGAGSGTMMAKDKAAAAAAAEPWTKAKVSFHDPNIPRPQDVYAIRVNNYNVPFDHVWLERTEDGSRPIHPLEKLPMEQFIDRNVPESEPVKPADLEDTPFTLVEDKNGLADLAKKLKSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIYIGLYLKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLRLQKESTSDNDLLLEVQKRSNEICLQLYEKELLTDTSYLHIYGLQEHDLDAKQLAVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMPTDTAELKRMVKSKYPFVDENLDQVVGIIWNATESSYAFESRAEQLKKERLEQLTDRVQTISSPEMKTSMNLSGQIRSMDKEILSDNIHQQVAQATFQELKRPMALGAIGNSTSGGQRDFFGGFSNKSEKMEKAKSYPAFYYPQLPQYSPEVGYGFQSINRTMAGTAQSPTGNKERDLQNPRRRQSFPPSGNISDTHQ</aaseq>

Gene Sequence

<dnaseqindica>1..345#955..1110#1901..2059#2163..2246#2398..2477#2577..2627#2745..2844#3124..3206#3344..3389#3683..3770#3867..4036#4175..4288#4355..4462#4833..5048#ATGGACGAGTTCAAAGGCCCAGGGGAGAAGGAGGAGGAGGAGGCCGGGGACAAGGCCGCGGCGGAGGAGGCGGGGGACGGATTCCAGGTGGTGCGCGGTAAGAAGAAGAAGCGGCCCAATGGTGGTTCGGCTTCGGGTGCTGGGTCGGGGACGATGATGGCCAAGGACAAGGCGGCGGCGGCGGCGGCCGCGGAGCCGTGGACGAAGGCGAAGGTGTCTTTCCACGATCCCAACATTCCGCGGCCGCAGGATGTGTACGCAATCAGAGTGAACAACTACAACGTGCCGTTCGACCATGTCTGGCTAGAGCGCACCGAAGATGGCAGCCGCCCTATCCACCCTCTGGTTAGTGTTCTATTTCGTCTTTTAGTACCTAGTTTTTGCTTTTGAGTCTTTTCCTTTTTCTGTTGCTTGGTGTGTTTAGAATGAGGAGCTAGGAAGCCCTTGATCAAATTTCAAGCCATGACATGACCAAACATTGTTTTACCTTTTTTTTTTTGTGGTGTTTTTATTTGTCAATCAAATATTGATGTTTCTTGGCTAAAGATCGAGCCTTGTATGGGTAAGAAATGTTTTGGGGATGGCCTACATCTACTTTGGAGTATGATCTTAAGACAAGAATGCTTGGGTATTGTTGAAAAACTATAAGATGGCATGTGCAGAGAGAAGCGGGGAAAGACAAAGATTTCTTGAATTTTTTTTTCGGATAATCAATGTGTTATTTTTATTATTATGTTGAAACTATCAAAAAGTAAGCATTTACATGTTGACTCAGGCCTAATTGGTTAACAGAATTAGTAGGAATGCTGTATTTTGTTTTTCGTAATCATATAGAGTTATTCAAGATTTGTTGGTTTTCTTATGTCCTTATTAATCAATAGTGGAAGGATTGACTTTTTTGCATATTCAATTATCCATGCATGGGATCTGATGTAATATACTCTCGCCTTGCAGGAAAAACTGCCAATGGAGCAGTTTATTGACAGAAATGTTCCTGAAAGTGAACCTGTAAAGCCAGCTGATTTGGAGGATACCCCATTTACGCTAGTTGAAGATAAGAATGGTTTAGCAGACTTAGCTAAAAAGTTGAAGAGTGTAAATGAATTTGCTGTAAGCATTTGTAATTAAGTTTTATTTAACTTTCAAATGAATATATATCATACTTTGTTTCCACTTGCATTGTATTATTTATTAACTTTCAACTGCTAGAGTATTTTGTCTTATGTAGATATCCCCCTGAAAAAAATTGTAAGCATGCTTCCCTGACATGAGTTCCTAATACTGGATTTTAAAATATGCAAACAAATCTTGTCAGTAATTATCTATAAAATGTAGTGAAACATAGCTGTAGTTGTTGGGAAGTAGCTTTTCTTTATTGGGTGGGCAGTACCTTTTATGATCTGGTACATTGATTTTGACACATATTGTGTACTGAGTTTATTTTGGTTAGAGCAGTAGGACTCTACTATTTCTAGAACTGTTAGACCATTAGCTCCTTAAATGTTTTCATTTTACCTATCATCATAAGGCTCCAGTCATTAACCCAATTAGCGCTGATACCCTGTAAGGATTAAACCATTTTATGTCCAATATATTGTAGCTTTTTGACTTAGGATTCAAATGAAATTGATATATGCTTTATTCTGAATGACATACTGTTGCCTGTATTGTTTCCCTTTCTTTGCCTTGTCTGACAACACCATTCACTTTCTGCACTAACGGCATTGCATAACTTTACTGGATTCTTGAAAAAGAACATATTCCATACTTTCTTTCTGTTGCCTTCTCGGTCTTTTACATTTCATTCATGTTATGGGCATCTGTTATGGAATAAAACAACTTCTGAGGCCTTGCAGTGTTAGGAACTTAAGCTTTATTTCGGTTCGTCTGTTGTTTTCAGGTTGACTTGGAGCACAATCAATATAGGTCATTTCAGGGTTTGACCTGCTTGATGCAGATTTCAACAAGAACAGAGGATTTTGTTGTAGACACCCTTAAACTTCGCATATACATTGGTCTCTACTTGAAAGAACATTTTAAAGATCCAACCAAGAGAAAGGTTTCTTCTGCGTTCTCCAATTGTTTATCATTTTATTGAGGGGAAATTGTTTATCATTGTGAACTCAAATTTCTGTTTACTTGGTTTCTTCTTGTGCAAAAAGGTAATGCATGGGGCTGATCGTGATATTATGTGGCTCCAACGGGATTTCCACATATATGTTTGCAATCTTTTTGACACAGGACAGGTATTTTGATTAATAGGCTAATAATACTAAATACTAAAACTGTGATTCTTGATTGCACCTTTAATTTACCTCTTTCTTCATTCTCCTTCAAAATCCTCATTTTCATGTCTTATAAACTGAACCTTGGATTTTCCTTTCTAACTCCAAACAGGCTTCAAGGGTTTTACAGATGGAGCGAAACAGCCTAGAGCACCTATTGCGTCACTTTTGTGGAGTCACAGCAAATAAAGAGTACTGCTCATTTACACCAACACAATTTTCAAGTATCCATGGTGACCTACCTAATTATCTACAATGAGTATTTATGACCAAAACATACCCCTTTTGTAGATATCAAAATGCTGATTGGAGGTCAAGGCCACTTTCTGATGAAATGATAAAGTGTTTAACCTATAGACCCTATCTTTCATTTATTTTGGTTTAGTCTTGCCTCGTTTTTGTCCTACATGTTTTACTATTTCATCCAGTTTTACCCACTTGCAAATAACTCCTGTACAGGTATGCTAGAGAAGATACACACTATCTGTTGTATATGTATGACTTGATGAGGTTGAGACTGCAAAAGGAGTCGACATCTGACAATGATCTTCTTCTAGAGGTAAAACCTTAGTTCACTAGTTTTTCCTTTTGTTCTGATCTGATTTTTAAGTCTGTATGAGTGAACATTATTTTGGTATATCCTTTTTTTCCCCTTGAATGAAGTATCGCTTTAGAACAAACTGCATGTAGATCTTACAAAGTAACCATTGTGCGATCCTGTTCACATAAATTTACAATCTGTTTGTTAGTCATGATTCCTGAATATATGTGATTTTCATTAGTACTGACAAAGAGTATCAAAATGGACATTCTGATCACCAGTTTTCGGTTATTTCAGGTGCAAAAGCGCAGTAATGAAATTTGTTTACAGTTGTATGAAAAGGAACTGCTGACAGATACATCTTATCTCCACATATACGGGTCTGTAGCTCTGTATGATGTTCTCTCAATTAGTTCGTTTCATTCTATCATTCAGAAATGCACTTTTGCTAACCTCGAAGTTATTTTGTTCACATTTATAATTTGCGTGAATCCCATTAACACGTGTATTATTACAGGTTGCAAGAACATGACCTGGATGCAAAACAGCTGGCTGTTGTATATGTAAGAGAACATCTTGTTATTTGTTTACTTCATTATGATCATTCTGTCTCGAACTCGAATAGAGCTAACATGTGTAACATGGCATTGTTCCTAGAAATGTATTTGTAGTTGCTATTACTATTGGCTGTTGGCGACAGTTTCTCATTTTGGCTATGTTCATAACTTTATTGACTTAAAGTTTCTGAAAGCCCATATGTCCATGCCATGTTTCCAAATAACAACTTATATTTTTTCTACCAATTCGGGTTATTTAATTTATGTGTGTAATAAATATCTCACATATCTTTTTGCAGGCTCTACATCAATGGAGAGATTATATAGCTCGTGAAGTAGATGAGAGCACTGGTTATGTGTTACCAAATAAGGCTTTAATTGAGATAGGTACTGCTGATTTATTTTTGTTTTTACGGCACAGGACTTGATGTATTAGTTTGGCTAACTAACTCTTTCATTTCCACCCCCTATTGAATTCAAAAGCAAAGAAGATGCCTACAGATACTGCAGAGTTAAAAAGAATGGTGAAATCAAAATATCCATTTGTTGATGAAAATCTGGACCAAGTCGTAGGCATCATATGGAATGCAACTGAATCTTCTTATGCCTTTGAAAGCAGAGCTGAACAACTAAAGAAGGAACGTCTGGAGCAGGTATGTTTAGGTTGATCTTCTGTGTATTTCATATCTTATTTGTTTGCTTTTGAGGATGGTGGGGAGAGGATCACAGAATGCGATTTCTTATGTGCCGATTATTAGCATTGACGTTTAAGCACCTTTGGTTGTATCCAGCTAACGGACAGGGTTCAGACTATATCATCACCTGAGATGAAGACATCTATGAACTTATCAGGCCAGATTAGATCAATGGATAAGGAAATACTGAGCGATAACATACATCAGCAGGTAAGAGATAATTTCAGTGTCTGTAGTTTTTGTTCGCCCCTGTATTTATGTAGTTGCATTTTGCAGGTGGCACAGGCTACTTTTCAAGAACTGAAGAGACCTATGGCTTTGGGAGCAATAGGGAATTCAACATCCGGGGGACAGAGAGATTTCTTTGGAGGGTTTTCAAATAAGGTATAAGCGAGTGCTTGATCTGAACAATGAAAACATTTAAGTGTTCATTTAAATGCATGCATGTCATTTTCCTTTTGAATTGTTGATGAGTTATTGGTATAGTACATTCTTGGTCATATACTGTAAAATGTTTAAATAATCCTTTTGGTTTAGTTCTGAATGTTTTGTCTTTACAATAGTTTTTTGAAAGGAAAATGTTTGAAGAACCTTCAATTTTTGCAATAGTTATGTCATATGCCACCATTTTACCTTTTTCCTTCATGCTTTCCTGGAAATGTTTTTAGATTTCCCAGTTAGCTTCATGTAGGAATTGTAGACTTATGTTTGTTATCATGCAATTGCAACTTATCAATAATTTACGGAATTGCAGTCTGAGAAGATGGAGAAGGCTAAATCCTATCCAGCCTTTTACTACCCCCAGCTTCCACAATATAGCCCTGAAGTTGGGTACGGCTTTCAATCAATAAACCGAACTATGGCGGGAACAGCACAGTCTCCTACTGGCAATAAGGAGAGGGATCTCCAGAACCCTAGAAGACGTCAATCTTTCCCACCTTCCGGTAACATAAGTGATACACACCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011896