BGIOSGA011908

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Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011908| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011908, complete gene.| tag = OS03G01...")
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Gene Name

BGIOSGA011908

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011908, complete gene.

LocusTag

OS03G0160100

Ensembl Transcript ID

BGIOSGA011908-TA

Ensembl Protein ID

BGIOSGA011908-PA

Length

6343

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3666289..3672631

Sequence Coding Region

3666289..3666732,3667544..3667966,3668432..3668532,3669175..3670436,3670622..3670662
,3670774..3670842,3670972..3671072,3671410..3671488,3671567..3671665
,3671754..3671822,3671915..3671964,3672208..3672384,3672493..3672631

Genome Context

<gbrowseImage1> name=IndicaChromosome03:3666289..3672631 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:3666289..3672631 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAATCTGTTCAAGAGTAAGATCAAGTGGCAGCACCGGTCGAACGACCCCGCGTCGTCGCAGGGGCAGGGGCAGGGGCTGCCGCAGCAGACGCCGCCGTCGCCATCGCCGGCGAGCTCCCCGTCGGGGGGGCCGCCTGCGCTATCCGTGTCGACGGTATCGTCGTCGTCCCCTTCCGCCGCCGCGACGCCGACGGGGGCTGCTGCGGCGGGGGCGGGAGGTGGGGGTGGGGGAACGGGTGGGGAGGATTACATGTTGTCGGAGGAGGAGTTCCAGATGCAGCTGGCGATGGCGCTGTCGGCGTCCAACAGCGAGTGCGTGGGCGACCTGGACGGGGAGCAGATCAGGAAGGCCAAGCTGATAAGCCTCGGCAGGGGCAACCGCTTCGCCGCCGTCCGGGACGACGAGCAAACCGCGGATGCGCTCTCCCGCCGCTACCGGGACTACAACTTTCTTGATTACCATGAGAAAGTTATTGATGGCTTCTATGACATTTTTGGCCCCTCTATGGAATCATCAAAGCAAGGGAAGATGCCATCACTAGCAGATCTTCAAACGGGCATAGGCGACCTGGGTTTTGAAGTCATCGTAATCAATCGTGCCATTGATACCACCTTACAGGAGATGGAACAAGTTGCACAATGTATCCTGCTTGACTTTCCTGTTGCAAATATTGCAGCCTTAGTTCAAAGAATAGCCGAGCTTGTTACAGATCACATGGGTGGACCTGTGAAAGATGCAAATGACATGCTCACTAGATGGCTAGAGAAAAGCACTGAGCTAAGAACCTCACTACACACAAGTTTGTTGCCTATTGGCTGCATCAAGATAGGTCTGTCTCGTCACCGTGCCCTACTTTTCAAGATTCTCGCTGATAGTGTTGGCATTCCTTGCAAGCTTGTCAAAGGGAGTAATTATACTGGTGATGATGATGATGCTATCAACATAATAAAGATGAATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCCGGTACTCTTATTCCATCAGATGTCTTAAGTTGGAAGGGCAACTCATTAAATTCTAATGCAAGACTCACCCAGAATCCATTGGCTGGGTCATCAAGTACAACTGATTCTAATCTCAGTGCCAATGCATTACCACCCGGACATAAAGGTGGCCAACTGCCTTTATTTAGCAGTGGCGATTGGATATTGGCCAGTCAATCTGGATATGAAAAAGATGGAGCCACCACATCTTCACAGGCCTCTTCAAGTGGCACAACATCTGTTGCTGCTGGAAGCGCTTTTGATAGTTCTTGGACATTAGTTTCTCATGGACAATCAGATGATCCATCAACCTCTGCTGGTATGTCAGCACAGCAGAAAGTTATACTTCCAGGTGGAGAACATCCATGGAATGAGAATATAAATGCGCGAAATGAGAATATAAAACTTGTTTCAGATTTACAAGGGAATTCAGAGTCCATCAACTTATTTGCCGACCTTAATCCTTTTGGGGGTAGGGAGCCCAAAAGGACTTCAGTGCCATTAAATGGGCCAGATAATAGAAATAATGAGTTGCAAAGACGCAGAGAGAATGTAGTCCCTAGCACACGAAGACCCCAGCAGCGATTAGTTATGAAAAACTGGTCTCCTTACAATGATGTTTCCAACAACAAGCAGTACAATTATGTTGAGGATTCATTTGCACGTAGAAATATTGGTGATAATGCTGCATCATCATCTCAGGTGGCACGGCCATCTGCAAAAAATACTAATCTTAATGTTGGAGTGCGCACTGATACACCATACATGGCAGCTCATAATTATGATAATAGTATGGCTGGTTCCTCTGCAATGAAGATGACTTCTACAGCTGGGATTGGGAAGGTTCCTGATAAGGTTCTGTACGGTGATTTGGACAAGGGCCTTACTAATTCTAGACTGGGGGATCAACCACCGATAGAAAGACATAAATGGGGCAATTCTGTAGAAGGAAGGATTCCAACAGGCACAGTTCACAATCAAGCAAAAGAACACAAGGAGAACTTCGATGGAAAGCAAGACAATAAGAAGTTACATCCTGATCCAAAGAAATCCCCACTTGACAGATTCATGGACACATCAATGCCATCAAGGAACCCTGAATCCGTTTCACCATCCTTTGCTAGGTCACACAAGCTAGACACCATGTTCGACGATGTGTCTGAATGTGAAATTCATTGGGAAGATCTTGTGATTGGTGAAAGGATTGGCTTAGGTTCATATGGAGAGGTGTACCGTGCTGATTGGAATGGAACAGAAGTAGCTGTCAAGAAATTCTTGGATCAAGATTTCTATGGTGATGCTTTGGATGAATTCCGGAGTGAAGTGCGGATTATGCGTCGACTGCGTCATCCAAATATTGTTCTCTTCATGGGTGCTGTTACTCGTCCTCCAAACTTATCTATTGTATCTGAGTATCTTCCAAGGGGAAGCTTATATAAGATCCTTCACCGTCCTAATTGCCAAATTGACGAGAAGCGTAGAATTAAAATGGCCCTTGATGTGGCCAAAGGAATGAATTGCCTCCATATTAGTGTACCAACAATTGTTCATCGGGATCTTAAATCACCAAACTTGCTGGTTGACAACAACTGGAATGTGAAGGTTTGTGATTTTGGACTTTCACGCTTGAAGCACAGTACATTCTTATCATCCAGATCCACTGCTGGAACTCCGGAGTGGATGGCACCTGAGGTCTTGCGGAATGAACAATCAAATGAAAAGTGCGATGTTTACAGCTTTGGTGTCATCTTGTGGGAATTAGCAACACTTAGGATGCCATGGAGTGGAATGAATCCAATGCAAGTTGTTGGGGCAGTCGGCTTCCAGGACAAGCGGCTCGATATTCCCAAGGAAATTGATCCTCTAGTTGCAAGGATCATATGGGAATGCTGGCAGAAGGATCCAAATTTGCGGCCCTCGTTTGCACAGTTAACCAGTGCTTTGAAGACTGTCCAAAGGCTAGTAACCCCTTCTCACCAGGAGTCCCAGAGCCCTCCTGTGCCTCAAGAAATATGGGTGAATTCTTCCACCCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MKNLFKSKIKWQHRSNDPASSQGQGQGLPQQTPPSPSPASSPSGGPPALSVSTVSSSSPSAAATPTGAAAAGAGGGGGGTGGEDYMLSEEEFQMQLAMALSASNSECVGDLDGEQIRKAKLISLGRGNRFAAVRDDEQTADALSRRYRDYNFLDYHEKVIDGFYDIFGPSMESSKQGKMPSLADLQTGIGDLGFEVIVINRAIDTTLQEMEQVAQCILLDFPVANIAALVQRIAELVTDHMGGPVKDANDMLTRWLEKSTELRTSLHTSLLPIGCIKIGLSRHRALLFKILADSVGIPCKLVKGSNYTGDDDDAINIIKMNEREFLVDLMAAPGTLIPSDVLSWKGNSLNSNARLTQNPLAGSSSTTDSNLSANALPPGHKGGQLPLFSSGDWILASQSGYEKDGATTSSQASSSGTTSVAAGSAFDSSWTLVSHGQSDDPSTSAGMSAQQKVILPGGEHPWNENINARNENIKLVSDLQGNSESINLFADLNPFGGREPKRTSVPLNGPDNRNNELQRRRENVVPSTRRPQQRLVMKNWSPYNDVSNNKQYNYVEDSFARRNIGDNAASSSQVARPSAKNTNLNVGVRTDTPYMAAHNYDNSMAGSSAMKMTSTAGIGKVPDKVLYGDLDKGLTNSRLGDQPPIERHKWGNSVEGRIPTGTVHNQAKEHKENFDGKQDNKKLHPDPKKSPLDRFMDTSMPSRNPESVSPSFARSHKLDTMFDDVSECEIHWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFYGDALDEFRSEVRIMRRLRHPNIVLFMGAVTRPPNLSIVSEYLPRGSLYKILHRPNCQIDEKRRIKMALDVAKGMNCLHISVPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSRSTAGTPEWMAPEVLRNEQSNEKCDVYSFGVILWELATLRMPWSGMNPMQVVGAVGFQDKRLDIPKEIDPLVARIIWECWQKDPNLRPSFAQLTSALKTVQRLVTPSHQESQSPPVPQEIWVNSSTP</aaseq>

Gene Sequence

<dnaseqindica>1..444#1256..1678#2144..2244#2887..4148#4334..4374#4486..4554#4684..4784#5122..5200#5279..5377#5466..5534#5627..5676#5920..6096#6205..6343#ATGAAGAATCTGTTCAAGAGTAAGATCAAGTGGCAGCACCGGTCGAACGACCCCGCGTCGTCGCAGGGGCAGGGGCAGGGGCTGCCGCAGCAGACGCCGCCGTCGCCATCGCCGGCGAGCTCCCCGTCGGGGGGGCCGCCTGCGCTATCCGTGTCGACGGTATCGTCGTCGTCCCCTTCCGCCGCCGCGACGCCGACGGGGGCTGCTGCGGCGGGGGCGGGAGGTGGGGGTGGGGGAACGGGTGGGGAGGATTACATGTTGTCGGAGGAGGAGTTCCAGATGCAGCTGGCGATGGCGCTGTCGGCGTCCAACAGCGAGTGCGTGGGCGACCTGGACGGGGAGCAGATCAGGAAGGCCAAGCTGATAAGCCTCGGCAGGGGCAACCGCTTCGCCGCCGTCCGGGACGACGAGCAAACCGCGGATGCGCTCTCCCGCCGCTACCGGGTGAGTCGCCATGACCAAGGATTCGATTCGAGATGGATTATATATGCTAAACTATGCAACCGTGTGACTAGTGAGATTTTAGTTTGCATTGCCATACAACAGTAGACTTATTGCGGGGGAAGGATTGTTTTACATGTTACGATTACCAGTTACTACTATAATCCATGCTACCATTGTTCTCGTCGAATTCAAATTCAACCAATGGATTGGATAGTAGCTTCCGTGGCTATGTCTAGACCATGTAAATGTGAATCTTCACCTTGGAATGGAAAATCACACATAGAATAGGGAAGGGCTCCTATCTAGCAGCTACATGTATTCATTCCTGTGGACTGGAATTACCTCCTTTGGTCTCTTCCAGGTTCCCGGTGATCAACCCATTAAAACAATTGTATTAATAAAATACTTCTACAATATACGTTGCCATGTTTTTGCTGGTGCATTGCGATAGAATCCTACAGATCAGAGTCTTGCATTGGATATTGCCCAGGAATAAAGGACTATTGTTTCTGTGGACGGCGGGGAAGTAGATGATATTACAAGGCAGCAAGATTTTCTAGACTGGAGGTTCTTTTGCGGGCAATTGTAGCTTTGTAGCTTGTTGGTTACATCAATCTATGTCTTTTACATGTTGGGTTGATTCCATTCTGTTACTTAGTGAGTGATATTTCATATTTGTAGATATTTTGCTTGGTAGATCACTTTTTTCCTTCCATGATGTGTCAATTAAGCTCAAACATGGGGATGATAAGTATATTTGCTTGCTGGATTGTCTGACATTCTATCACTGTGCTTCTATTCTGACTTTCAGGACTACAACTTTCTTGATTACCATGAGAAAGTTATTGATGGCTTCTATGACATTTTTGGCCCCTCTATGGAATCATCAAAGCAAGGGAAGATGCCATCACTAGCAGATCTTCAAACGGGCATAGGCGACCTGGGTTTTGAAGTCATCGTAATCAATCGTGCCATTGATACCACCTTACAGGAGATGGAACAAGTTGCACAATGTATCCTGCTTGACTTTCCTGTTGCAAATATTGCAGCCTTAGTTCAAAGAATAGCCGAGCTTGTTACAGATCACATGGGTGGACCTGTGAAAGATGCAAATGACATGCTCACTAGATGGCTAGAGAAAAGCACTGAGCTAAGAACCTCACTACACACAAGTTTGTTGCCTATTGGCTGCATCAAGATAGGTCTGTCTCGTCACCGTGCCCTACTTTTCAAGGTCAGTTCTCTCTCAGAAAATCCTCAATATATTGAATGTTATGAATTGTCTAGGGTAAGGGTTCAAAGACTAGGGGATATGGCACTCGCCTTCTAATAACGGTGGCAGGGGTTCTCCCTGCTGAGCTAAAAGAGGATTTGAGGCTTAGGTCTAACTTTAGAGATTCATTGATTGATTGATAATAGAGTACGTGGGGGTCCCTTTATAGGGAGGACATACTAGACACATAAGGAACTAAATCTCTAGTATTATATAAACCAATCCAATCTCTATCTCTAACTTTCTAATAAACTTCATCTCTTTCCTAACTAGATAATCTCCTATACTTATATGATTTATTCCTAATTTATCATGCCCAAACTGCTGCATGGGCCTATGCTCATACATTGAATGTAAGCACTAGATTTCTTCATTTGTCCAACATATATAGATGTCCGCTTATGGCTACTGTATATCTTCGTGCAGATTCTCGCTGATAGTGTTGGCATTCCTTGCAAGCTTGTCAAAGGGAGTAATTATACTGGTGATGATGATGATGCTATCAACATAATAAAGATGAATGAAAGGTATTGATGTATTTGATCATTGCTGTTTCTCTGGGGGAAAACTATAGTAAAAAAACCCGGACCGGTGGGTGACCTGGCCGACCTTCTGGTTCACCGGTCTAACCGGTGGCTCGGATGGTTGAACCACGGTTCACATGTGTACATGTATATTGTTATTCCCTCCTACTCACATATGGTGCAATAGCATAAGGGTTAGGCCATCCTTCCGTGAGCACACTGCCCAGTGTTCGATTCCCACCAAATGCGCCACTCCTTGCCAATTTTGCGGAAAAAAAGGGGACAGCCACAGCAAGCATTGATGAAATGGGCCTCAGGCAGCCCATTTATGGCCCATTTGAAGGTTGACCTGTCCAACTAGTATCGGTTTAATGTCCGGTTCGCCTAAGAACCGGCCGGTTCAGCCGGTTCAAAGCGGTTTGAATGCATGTCCGGTCTTTGAAGCAAACCGAACCGTGCTAAGGTCTGGTTCCCATTTTTTTCTGGTTGAACCGCCGGTCCGGTCTGGTTTTTTCTACTATGGGGAAAACAATCCAAATACATTATTTATTTATTCGTCTGCTACCTTTGTTTCAAATATATTTTTAAATAATTTGGTATTGCTGCCTTACATTTTCTAAGTGGGTTTATGTGCTGTTTTTGCAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCCGGTACTCTTATTCCATCAGATGTCTTAAGTTGGAAGGGCAACTCATTAAATTCTAATGCAAGACTCACCCAGAATCCATTGGCTGGGTCATCAAGTACAACTGATTCTAATCTCAGTGCCAATGCATTACCACCCGGACATAAAGGTGGCCAACTGCCTTTATTTAGCAGTGGCGATTGGATATTGGCCAGTCAATCTGGATATGAAAAAGATGGAGCCACCACATCTTCACAGGCCTCTTCAAGTGGCACAACATCTGTTGCTGCTGGAAGCGCTTTTGATAGTTCTTGGACATTAGTTTCTCATGGACAATCAGATGATCCATCAACCTCTGCTGGTATGTCAGCACAGCAGAAAGTTATACTTCCAGGTGGAGAACATCCATGGAATGAGAATATAAATGCGCGAAATGAGAATATAAAACTTGTTTCAGATTTACAAGGGAATTCAGAGTCCATCAACTTATTTGCCGACCTTAATCCTTTTGGGGGTAGGGAGCCCAAAAGGACTTCAGTGCCATTAAATGGGCCAGATAATAGAAATAATGAGTTGCAAAGACGCAGAGAGAATGTAGTCCCTAGCACACGAAGACCCCAGCAGCGATTAGTTATGAAAAACTGGTCTCCTTACAATGATGTTTCCAACAACAAGCAGTACAATTATGTTGAGGATTCATTTGCACGTAGAAATATTGGTGATAATGCTGCATCATCATCTCAGGTGGCACGGCCATCTGCAAAAAATACTAATCTTAATGTTGGAGTGCGCACTGATACACCATACATGGCAGCTCATAATTATGATAATAGTATGGCTGGTTCCTCTGCAATGAAGATGACTTCTACAGCTGGGATTGGGAAGGTTCCTGATAAGGTTCTGTACGGTGATTTGGACAAGGGCCTTACTAATTCTAGACTGGGGGATCAACCACCGATAGAAAGACATAAATGGGGCAATTCTGTAGAAGGAAGGATTCCAACAGGCACAGTTCACAATCAAGCAAAAGAACACAAGGAGAACTTCGATGGAAAGCAAGACAATAAGAAGTTACATCCTGATCCAAAGAAATCCCCACTTGACAGATTCATGGACACATCAATGCCATCAAGGAACCCTGAATCCGTTTCACCATCCTTTGCTAGGTCACACAAGCTAGACACCATGTTCGACGATGTGTCTGAATGTGAAATTCATTGGGAAGATCTTGTGATTGGTGAAAGGATTGGCTTAGGTATTTTTCCTCAACTAAGATTTTGACATGATCCTTGCTTCTCTATACATTAACAAGTTGAACCGACAAATCTTTAACAATTTGTCAAACTATATTATTATAGCTCAGCCATGTGTAAACTCATTGCACTATCTGATGCCAATTTGTTGCACAAACTTGAACCAACTTCTTCCTCCTCCCAACAGGTTCATATGGAGAGGTGTACCGTGCTGATTGGAATGGAACAGTAAGAAACTGTTTGCTTTTATTTCCATATTGTGCCATAGAAACATTCTTCCCAGAGGTTAAATTCTTTATTGTTTTGCTTCTGTCAAAAAACATTTTTGTTTATTTGCAGGAAGTAGCTGTCAAGAAATTCTTGGATCAAGATTTCTATGGTGATGCTTTGGATGAATTCCGGAGTGAAGTAGGTGAAACTATATATATTTTATATATCTTAGAGCTTTACTGGCTATAGCGTGGATTCATTTATTTGTCATTTTTAATTGATTTTTGCTGCAATGTTTTGATTTGCCATATACTTTCTTTTTACAAGGTGCGGATTATGCGTCGACTGCGTCATCCAAATATTGTTCTCTTCATGGGTGCTGTTACTCGTCCTCCAAACTTATCTATTGTATCTGAGTATCTTCCAAGGTATAACAATTTTCTACTGTTGTTTGCTTGTGAAGATCTTTTGGTGTTTATGATAAAGTATCATGGTGTAGATAAACATAGAAAACATTCTATCTGGAAGGACCACAAAGAAAAGCTCTCTCAACAACTTAGCTTTAGAATGGAACATAACACTGGAGGTTCAACATGCTGTAGTTGAAATACCTGTCTTTAATGATTTACTTGTGCATGGGAGGTGGCATACTGGCATCTATCTATAGTAGTTATATTATAGTGCAACTCATGCTCTATAGTTATTGTACTGGTCATGTTCGACGAATTGATGGCTCACCCTTGACTACTCTCCTGTCCTTGGCAGGGGAAGCTTATATAAGATCCTTCACCGTCCTAATTGCCAAATTGACGAGAAGCGTAGAATTAAAATGGCCCTTGATGTGGTAAGTATTTTCTATATTTTCTTGGCATGTTTGTTTATTTTTGTATCTGCTTGAGAAAATGGTTGCTTTCTCTTAAAGGCCAAAGGAATGAATTGCCTCCATATTAGTGTACCAACAATTGTTCATCGGGATCTTAAATCACCAAACTTGCTGGTTGACAACAACTGGAATGTGAAGGTACTGTGCTCTTTTTACCTTTACATTCATTCAGTCATAAGTATTTATGAGCGTGCTGATCGATTGGCTCACCAATGATGTGAAATAGGTTTGTGATTTTGGACTTTCACGCTTGAAGCACAGTACATTCTTATCATCCAGATCCACTGCTGGAACTGTAAGTACTAAACCGGACCATAGTAGGATGAGTTCTCTCCTTCTTTGATCATCACTAAACATTTACTATTTCTGTTTTCGATATCTCACCAGCCGGAGTGGATGGCACCTGAGGTCTTGCGGAATGAACAATCAAATGAAAAGTAAGTTATTCCTCGATGGCTTTTGTTTCAATAACTATTAGCTTTTGCCCTAGCTTGTTCAATTTATTTTTTCATTCTGGGCATACCATTCAAAGTTGTTCAGCATTACAGAAGAAATTATGTTTATCTTCCAGTCTCTACTCGTAGAAATGGAACACCCATCTCCCTCACAAACCTTTCAGCTTTCCTTGTTTGATTGGTGTGGCAGTAATCTCACTCAGACATCACCTGAAATTTCTTCAGGTGCGATGTTTACAGCTTTGGTGTCATCTTGTGGGAATTAGCAACACTTAGGATGCCATGGAGTGGAATGAATCCAATGCAAGTTGTTGGGGCAGTCGGCTTCCAGGACAAGCGGCTCGATATTCCCAAGGAAATTGATCCTCTAGTTGCAAGGATCATATGGGAATGCTGGCAGAAGTGAGTGTTTAGAAACAAACCTATTTTATGTTGCATCAATAAAGTACTCTCTTCCAACTATCAATTGTGTTGCTAGATCCGAGCTAATATTTGGTTTTTAAACCTCAGGGATCCAAATTTGCGGCCCTCGTTTGCACAGTTAACCAGTGCTTTGAAGACTGTCCAAAGGCTAGTAACCCCTTCTCACCAGGAGTCCCAGAGCCCTCCTGTGCCTCAAGAAATATGGGTGAATTCTTCCACCCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011908