Os12g0417000

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Gene Name

Os12g0417000

Description

Putative plant transposon protein family protein

Version

NM_001073186.1 GI:115488333 GeneID:4352075

Length

2649 bp

Definition

Oryza sativa Japonica Group Os12g0417000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:13021493..13024141

Sequence Coding Region

13021507..13021531,13021678..13021886,13021965..13022109,13022197..13022465,13022542..13022745
,13022820..13022912,13022989..13023087,13023161..13023517,13023629..13023847
,13023947..13024141

Expression

GEO Profiles:Os12g0417000

Genome Context

<gbrowseImage1> name=NC_008405:13021493..13024141 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:13021493..13024141 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttgttgaagcaaacaaacctaagacgaaaaacaatggaaaaggcaagaggaaggtctaaagaaaaggttatcaatggaatggcagttggaaagaataaggaaaacactcttactgattatgaaatacgtcgcaaaggtgtcatagcagcaaacaatgagatgttacaatctctaaacctcccgcccatgggcagcaatacgcatgttcaacaacgacccaagaaaatacctaaggtaactgatggtagaaacatggtgccatgtggagatcataacttgcggtctaggtcaagaaataacctagaggaaaatgtagatgaaaatgttggcgatgatcctgaataccaactagaagaagatgccatggatgacaatgaagtagatgtagaagaaactcttgaacttgaaaaagttcagcagaaaaagaaggaaggaaggggtatcactcaaaagctcaacataatttcaagggtgggtgaagctaaaatcaaaattactctcaacgaatttggtcagccggtggggcttgattctgaggaatttgccactacttttgggacatttgtgagaaagaaaatacctgttgcatgtggtgattggagagatgttgacgtcaaagacaagctgaaagtatgggaagatgtacagaaacattatgagatcaatgaatatggtttacattttgtgttggagacatcacatatgatatggaaggattataaggctgatttgaagaagaaacattttgatgcaaatctgactgatgaggaacttatggacagacgtgacttaagagtcaacgaggcacaatggaagtggcttattaaccattggagatctccagaagctgtggcccgctccataagaggcaaggcaaatcgcggaatgttgcgcatgttacatacagctggtagcaagagccacgctcgtgttggccatgacatgggtgtgaaaactgggcgtcctcctagaagggatgaagtctttgttgaaacgcacaaacgaaaaaatggagaaattattccagaggctgcagaaacagttgaaatgctaaaagaggctgcagaagttaacccagagttgaagaacaaaacaatccaggagggcgatttgtattcacgtgtttgtggaaccaaggaaccaagaggccgtgttcgtgttttaggaaagggaccaactcctcaggatgtgggcacaccaggaacacgtagcagaatgccaacaagacttcagctagaaatagaatctcatcgacagaccaaacaagaagttgtatgtctgaataaacgcatggacgacatgcaacaacgttttaacataatggagcatatggttatgtctcaaggtgtgcagaatatagaaacaagttcccatcatgcttctaattctcgacatgctgagagcccaaggagtccagtacttgaagagctgcatcctaatgagcctaccaataggcacttgctggaggagcctcatgctgagcctaccagtaggcacttggataatatcctatcgggtgatgactttattatccgcaaaaaagctataacgccaagggtgccctcaagaaacacagccacaggaagccatgaagccaccattgctgaaggagaaaatcttgttggtaaagatgttatcttatatgctgtcttgagatctgacacccctgtggctaaagcaacaattgtatcaattcatccaagttccttggtgggaggtcaacctctaggtgttgaattctatgaagttgttgtcaatgtcgtgcttaaaagagatgcattgcttcctcgtccatatgatgatatgcaaactatg</cdnaseq>

Protein Sequence

<aaseq>LLKQTNLRRKTMEKARGRSKEKVINGMAVGKNKENTLTDYEIRR KGVIAANNEMLQSLNLPPMGSNTHVQQRPKKIPKVTDGRNMVPCGDHNLRSRSRNNLE ENVDENVGDDPEYQLEEDAMDDNEVDVEETLELEKVQQKKKEGRGITQKLNIISRVGE AKIKITLNEFGQPVGLDSEEFATTFGTFVRKKIPVACGDWRDVDVKDKLKVWEDVQKH YEINEYGLHFVLETSHMIWKDYKADLKKKHFDANLTDEELMDRRDLRVNEAQWKWLIN HWRSPEAVARSIRGKANRGMLRMLHTAGSKSHARVGHDMGVKTGRPPRRDEVFVETHK RKNGEIIPEAAETVEMLKEAAEVNPELKNKTIQEGDLYSRVCGTKEPRGRVRVLGKGP TPQDVGTPGTRSRMPTRLQLEIESHRQTKQEVVCLNKRMDDMQQRFNIMEHMVMSQGV QNIETSSHHASNSRHAESPRSPVLEELHPNEPTNRHLLEEPHAEPTSRHLDNILSGDD FIIRKKAITPRVPSRNTATGSHEATIAEGENLVGKDVILYAVLRSDTPVAKATIVSIH PSSLVGGQPLGVEFYEVVVNVVLKRDALLPRPYDDMQTM</aaseq>

Gene Sequence

<dnaseqindica>15..39#186..394#473..617#705..973#1050..1253#1328..1420#1497..1595#1669..2025#2137..2355#2455..2649#catagatggaataattgttgaagcaaacaaacctaagacgtaagcatttttgtatatatattattgttgctactcatttctgcttgtacaccaagtaatcttagtacttttcctgttccttctactgtactgatgttcgttgaagcactctttactggttggtaattttttttatcatggcgcaggaaaaacaatggaaaaggcaagaggaaggtctaaagaaaaggttatcaatggaatggcagttggaaagaataaggaaaacactcttactgattatgaaatacgtcgcaaaggtgtcatagcagcaaacaatgagatgttacaatctctaaacctcccgcccatgggcagcaatacgcatgttcaacaacgacccaagaaaatacctaaggttatgtgtcttgaacttctggttctaattttttagtatccaatatgtaccttttatttgacatcaaacttctgttaggtaactgatggtagaaacatggtgccatgtggagatcataacttgcggtctaggtcaagaaataacctagaggaaaatgtagatgaaaatgttggcgatgatcctgaataccaactagaagaagatgccatggatgacaatgaaggtattaaagaaactgagctgtgctatttatggcaattcagatcgtgctagtgttatacatgcttatgcttgtttctgttttgttcagtagatgtagaagaaactcttgaacttgaaaaagttcagcagaaaaagaaggaaggaaggggtatcactcaaaagctcaacataatttcaagggtgggtgaagctaaaatcaaaattactctcaacgaatttggtcagccggtggggcttgattctgaggaatttgccactacttttgggacatttgtgagaaagaaaatacctgttgcatgtggtgattggagagatgttgacgtcaaagacaagctgaaagtatgggaagatgtacaggtagattgactgttatttgtcttgttccattaattttgtatatcctactaattcaatattttttatattaaaacagaaacattatgagatcaatgaatatggtttacattttgtgttggagacatcacatatgatatggaaggattataaggctgatttgaagaagaaacattttgatgcaaatctgactgatgaggaacttatggacagacgtgacttaagagtcaacgaggcacaatggaagtggcttattaaccattggagatctccagaagctgtggtaaggcatccagtgttatttgctgtactttacattaaaatagcctacatattgtgttcataactgttgtgtaggcccgctccataagaggcaaggcaaatcgcggaatgttgcgcatgttacatacagctggtagcaagagccacgctcgtgttggccatgacatggtaacataagtatatcatgttagttcattagatgtatgacttacaaagctttgtgtactctaacttcttgttttagggtgtgaaaactgggcgtcctcctagaagggatgaagtctttgttgaaacgcacaaacgaaaaaatggagaaattattccagaggctgcagaaacagttgtatgctttcattttctaaaacagatttcatgtgtagaatactacttgctaatatgtttttccaacattataggaaatgctaaaagaggctgcagaagttaacccagagttgaagaacaaaacaatccaggagggcgatttgtattcacgtgtttgtggaaccaaggaaccaagaggccgtgttcgtgttttaggaaagggaccaactcctcaggatgtgggcacaccaggaacacgtagcagaatgccaacaagacttcagctagaaatagaatctcatcgacagaccaaacaagaagttgtatgtctgaataaacgcatggacgacatgcaacaacgttttaacataatggagcatatggttatgtctcaaggtgtgcagaatatagaaacaagttcccatcatgcttctaattctcgacatgctgaggtaaagtgccttgcctatctggatttatctatttgatttcatgttatttggaaatatgtgttgtatttgttgcctacaaaagcttatgtcattatgttgatttggttgtagagcccaaggagtccagtacttgaagagctgcatcctaatgagcctaccaataggcacttgctggaggagcctcatgctgagcctaccagtaggcacttggataatatcctatcgggtgatgactttattatccgcaaaaaagctataacgccaagggtgccctcaagaaacacagccacaggaagccatgaagccaccattgctgaaggagaaaatcttgtaatttttctcatccttctaaacctagcttttatttaagtcatttaaatgctattggtattaattggtcaacatactgaactgaattgtgtcctttaggttggtaaagatgttatcttatatgctgtcttgagatctgacacccctgtggctaaagcaacaattgtatcaattcatccaagttccttggtgggaggtcaacctctaggtgttgaattctatgaagttgttgtcaatgtcgtgcttaaaagagatgcattgcttcctcgtccatatgatgatatgcaaactatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0417000, RefSeq:Os12g0417000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0417000&oldid=5674"