BGIOSGA011933

From RiceWiki
Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011933| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011933, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011933

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011933, complete gene.

LocusTag

OS03G0166800

Ensembl Transcript ID

BGIOSGA011933-TA

Ensembl Protein ID

BGIOSGA011933-PA

Length

4340

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4067916..4072255

Sequence Coding Region

4067916..4068073,4069050..4069812,4070171..4070257,4070361..4070444,4070526..4070612
,4070706..4070792,4071339..4071392,4071480..4071571,4071664..4071778
,4071863..4072013,4072110..4072255

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4067916..4072255 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4067916..4072255 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGACCATCCTGCGGGTGCACCTCCCGTCGGAGATCCCTATCGTGGGCTGCGAGATCACGCCCTACGTGCTCCTGCGGCGCCCCGATGGCGGCATCTCCACCGAAGATGTGCATGAGGCCATCCCTCTGGATGGGCACTTTATGCGGTATAAATGGTACCGCATACAAAGTGATCGAAGAGTCGCTGTCTGCAATGTTCATCCAACAGAACAGGCAACAATACAGTGCTTGGGGTGTTTGAAGTCAAAAATACCAGTTGCTAAGAGCTACCATTGTTCTGCTAAGTGCTTCTCAGATGCCTGGCAACACCACAGGGTGTTGCATGAACGTGCTTTGAGCGCTTTAAATGAAAATGGCAACGAAGAGGAGGAGTTATTTGGCCGATTTGGTAGTGGCAATGCAGGGATTATAAATGCCAGTTTATCTGGCTCAACATCAAATATTGGACAGAGCTCAAGTGTTAATAATGGACCTACACCTGTGTATCCCACTGGAACTGAAAAGAATTCTGGTGAAACTTGGTTTGAAGTGGGACGTTCACGGACGTATACGCCAACTGCTGATGATATTGGGCATGCCCTAAGATTCGAATGTGTAGCAGTGGATTCAGAAACAAGGTCGAGTGTGGGAGCTCCAACTTCAATCATGACATCTCGTGTAATTCCTGCTCCAACACCCACTCCGCGTCGTCTGATACCAGTGAATTCGGCTGATGTAATGGGACAATTTGATCTAGACAGCCGAAATTCTTCTTTTGGGACATTCACAGTGTTGTCTTACAATATTCTTGCTGATACATATGCAACAAGTGATACATACAGCTATTGCCCAACTTGGGCACTTTCATGGCCTTACAGAAGACAAAATTTGCTGCGTGAAATAATTGGTTACCATGCGGATATCATCTGCCTTCAGGAGGTACAAAGTAACCACTTTGAAGAATTCTTTGCACCGGAGCTTGACAAACATGGATATCAGGCACTGTTCAAGAAAAGGACAACTGAGGTGTACACTGGCAATCTCCAATCAATTGATGGATGTGCTACTTTCTTTCGAAGGGACAAATTTTCACATGTCAAAAAATACGAGGTTGAGTTTAATAAGGCTGCACAGTCTTTAACTGATGCAATTATTCCAGCTGCTCAAAGAAAAGTGGCTTTAACTCGATTGATTAAGGATAACATTGCGTTGATTGCAGTTTTAGAAGCTAAGTTTGGTAGCCATGGGGCTGATAACCCTAGCAAAAGACAGCTCCTTTGTGTGGCAAATACGCATATCAATGTTCACCAAGACCTCAAAGATGTCAAGCTATGGCAGGTTAACACCCTCCTAAAAGGTTTAGAAAAAATAGCTGTCAGTGCGGACATTCCAATGCTGGTCTGTGGAGATTTCAATGCAACCCCTGGAAGTACTCCACATGGGCTTCTTGCAATGGGGAAAGTTGATCTGATGCATCCAGATCTAGCAATAGATCCTCTTGGAATTTTGCGACCAGCAAGCAAGTTGACACACCAGCTTCCACTGGTGAGTGCGTACTCTTCATTTGCAAGGATGGTTGGTGCTGGTTATGATTTGGAGCACCAGAGGAGGAGAATGGACCCTGCAACAAATGAACCACTTTTCACAAATTGCACGAGGGATTTCACTGGGACCATTGATTACATATTTTACACAGCGGATTCGTTATCAGTGGAGTCGTTGCTGGAACTTCTGGATGAGGATAGCTTACGGAAAGACACTGCGCTTCCTTCACCTGAATGGTCATCAGATCATATAGCACTCTTAGCAGAATTTCGGTGCAAGCCTAGAGTTAGACGATGA</cdnaseq>

Protein Sequence

<aaseq>MLTILRVHLPSEIPIVGCEITPYVLLRRPDGGISTEDVHEAIPLDGHFMRYKWYRIQSDRRVAVCNVHPTEQATIQCLGCLKSKIPVAKSYHCSAKCFSDAWQHHRVLHERALSALNENGNEEEELFGRFGSGNAGIINASLSGSTSNIGQSSSVNNGPTPVYPTGTEKNSGETWFEVGRSRTYTPTADDIGHALRFECVAVDSETRSSVGAPTSIMTSRVIPAPTPTPRRLIPVNSADVMGQFDLDSRNSSFGTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHFEEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDLKDVKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTIDYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEFRCKPRVRR</aaseq>

Gene Sequence

<dnaseqindica>1..158#1135..1897#2256..2342#2446..2529#2611..2697#2791..2877#3424..3477#3565..3656#3749..3863#3948..4098#4195..4340#ATGCTGACCATCCTGCGGGTGCACCTCCCGTCGGAGATCCCTATCGTGGGCTGCGAGATCACGCCCTACGTGCTCCTGCGGCGCCCCGATGGCGGCATCTCCACCGAAGATGTGCATGAGGCCATCCCTCTGGATGGGCACTTTATGCGGTATAAATGGTGAGTTAGCTCACATCTGAACCTTCAAATGATTCAAATTTCCTAGTCTTGTAGAAATGTTTACTTAATTGAAGTTGCAAATGACTATAGATTCGTTTTATGAAATAATAGCGATTAGCCGATTACAAGTTTTTAGATTACAGTGCAGAATGTTAGAAAAAATACAGAACTAAAAGACATTTTGCATTCTAGCTAGTAGATAATAGATAGATGTGTATATAGACTGCGAAATGCTAGTTTGCATCCTTGGGACACTCAATGAGAAGTATCGCCATTCGCTCATTTGTATGGCAGATGAATTATGTTATGCATGGCGTCATCAGTAATTTAATACGTTTGGCGTTTTGTATTATGTGTAGTGATATGCCCCTGATAACCCCAACACTAGCTGGTATGAAGTATAACTAGATGACTGGTAGATGGACAACGGGTAAACATTTTAGGGAACTGATTTTTTGTTGTGCCGTGTCGACATTATGTCATTCAGGATTAATTGAAACTTTCTGGGTTTCAAATAATGTGTTTTTTTGCTAATGTATCCACGGTCAGGGTTTTACTTGCATCATTTCTTGATTGTGGCAATAAACGAGCATCCTTAAGAGCACAGTCAAAGTTCTGTCGAAAAATTCGCGGTAAAAAATTCATAGAGCTCTGTCAACGTTGTCGGTTATTAAAAACGGAAGGTTTGTCAGTGCCTACAGTGAAATTCCTCTTGTTTTATAGTATATCTTGAATAGTCTATTATAATTGCCTTATTGCTATTATTGGGAGCTTTGTTTTGGTTATCATTTGGTGACACTTAGGAAATGATTAAATGCCTTTATAAATTATTCAATCAGCCTTTTTTGAATTGTGGATTCTACATATGTAGCCGCAACCCTGCAACATGGAGTATTGCTATTCCCTCAGCTAAACTAATCTTTGAACTTTTTACATAAATAACATGTGTGACCACTGATTTTACTTCCTTATAAAGGTACCGCATACAAAGTGATCGAAGAGTCGCTGTCTGCAATGTTCATCCAACAGAACAGGCAACAATACAGTGCTTGGGGTGTTTGAAGTCAAAAATACCAGTTGCTAAGAGCTACCATTGTTCTGCTAAGTGCTTCTCAGATGCCTGGCAACACCACAGGGTGTTGCATGAACGTGCTTTGAGCGCTTTAAATGAAAATGGCAACGAAGAGGAGGAGTTATTTGGCCGATTTGGTAGTGGCAATGCAGGGATTATAAATGCCAGTTTATCTGGCTCAACATCAAATATTGGACAGAGCTCAAGTGTTAATAATGGACCTACACCTGTGTATCCCACTGGAACTGAAAAGAATTCTGGTGAAACTTGGTTTGAAGTGGGACGTTCACGGACGTATACGCCAACTGCTGATGATATTGGGCATGCCCTAAGATTCGAATGTGTAGCAGTGGATTCAGAAACAAGGTCGAGTGTGGGAGCTCCAACTTCAATCATGACATCTCGTGTAATTCCTGCTCCAACACCCACTCCGCGTCGTCTGATACCAGTGAATTCGGCTGATGTAATGGGACAATTTGATCTAGACAGCCGAAATTCTTCTTTTGGGACATTCACAGTGTTGTCTTACAATATTCTTGCTGATACATATGCAACAAGTGATACATACAGCTATTGCCCAACTTGGGCACTTTCATGGCCTTACAGAAGACAAAATTTGCTGCGTGAAATAATTGGTTACCATGCGGATATCATCTGCCTTCAGGAGGTATGCCATTTTAATTGTTATCCTTTTTTTATAGAAAATATTTGAAAGATCTGAATGTTGCATATCTACCACTTCCGACTTACATATGTAAAGTGCGCGAAATATGTTTGATATGCTTAACAAACTTTGGTGTCATTTTCAGTCATTTTTCAATAGAACACCCTTATAATTTGTTTATCCTACATTCCTACTAAACCTTGCTTTGCTCATGATACTGTCAAGTCTTTCTTGTGTTGTGTCCTGCTTCATTAGTTCCACATTAGCTAGATCACTATTATTGGTTGCTCTCTTGATTTTTCAGGATCAAAATAATCAAGTTTCAAGAATTCTATTATGAATTAAACATTACTACTTTCAGGTACAAAGTAACCACTTTGAAGAATTCTTTGCACCGGAGCTTGACAAACATGGATATCAGGCACTGTTCAAGAAAAGGACAACTGAGGTATGCCTTTTATTTTGTGGTTGGATAAACAACTTGGCATACTATTTTGTTTGACTTCGTAATTATTGCTTGATGCGTTGTTTGTGCATCAATTATGTAATAGGTGTACACTGGCAATCTCCAATCAATTGATGGATGTGCTACTTTCTTTCGAAGGGACAAATTTTCACATGTCAAAAAATACGAGGTATCTCAATGGCAGGGTTTTTGTTATAGTCTTCAATTTTCTTCATACCATTCGTATAATATTTTCTGAACTTCAATGTAGGTTGAGTTTAATAAGGCTGCACAGTCTTTAACTGATGCAATTATTCCAGCTGCTCAAAGAAAAGTGGCTTTAACTCGATTGATTAAGGTATGCCCCAAATTTAAAAACAAGAAATATGTCTTACGACCTGTGCTGTCAATTGTTATATTAATGTGCTAATTCTTCTTCTTGACTGTGCAGGATAACATTGCGTTGATTGCAGTTTTAGAAGCTAAGTTTGGTAGCCATGGGGCTGATAACCCTAGCAAAAGACAGCTCCTTTGTGTGGTAAGATATTCTGAGTCTATATTTGCAAATGTAATTGTTGTACTCTTTCTGAATCAACAGAAGAACATCCATTTCAGTGAGATCTCACTTATTAAACTATACATCTAGATGAAGGATGTTTCTTCATGGATTTTCTGTAAGGTTTTGTTCACGAACATGTAGCATCAGACGATTCTGTCATGAGTAAGGACTCAGGAAAAATATAATAGAATGCCATACACCAGTTACCAAAGTTTTTTACCCATAGTTGTAGCATGTAGGATGCTTATGATGTGAGAGAACAAGATGCATGCTTTACATGTCCATTGTATCCATGGTATTCATCAATTTATTGTTGGATCCCTCTTTTCTTTTTGGGTCATTTTGATTATTCGATTATCGGAGGGGTTTCCGCACCTTTTATGATATACTTTGAGTTGTTTACCTGCATTAAGTAGACTGTATCAAGTATATTTGCAGTGATCTTACTTCATGCTTAGTTCTCTTGTAATAGCATTTTTGGTGCCATGGGGATCTCATTTGTTTCTTAACCTGTTTGTTTTTCAGGCAAATACGCATATCAATGTTCACCAAGACCTCAAAGATGTCAAGCTATGGCAGGTCAGATCATAACTCAGTTTGCAGAATTTTACAGTATTTCTAATTTTCATGAATTGACAATTGTAATCTTCTATGAAATTCTTTCAGGTTAACACCCTCCTAAAAGGTTTAGAAAAAATAGCTGTCAGTGCGGACATTCCAATGCTGGTCTGTGGAGATTTCAATGCAACCCCTGGAAGGTTTGTTCATCTACTGAAGGATTTGGATTTATTCTCCTTATGTCCTACTATGTGAAGATTCTAAATGGCAAATGCGCACTGTAACGTTGCAGTACTCCACATGGGCTTCTTGCAATGGGGAAAGTTGATCTGATGCATCCAGATCTAGCAATAGATCCTCTTGGAATTTTGCGACCAGCAAGCAAGTTGACACACCAGCTTCCACTGGTATAGTGAACCCAACGCAGCTCTCTTAATCTACTTTATATTTTTTAGTTATGGCTCTGAACAAAGGATTTGCTTGTTTTACAGGTGAGTGCGTACTCTTCATTTGCAAGGATGGTTGGTGCTGGTTATGATTTGGAGCACCAGAGGAGGAGAATGGACCCTGCAACAAATGAACCACTTTTCACAAATTGCACGAGGGATTTCACTGGGACCATTGATTACATATTTTACACAGGTTTGTGGTGAAACTTTGTTGAAATGCTGCCTGTGGTGTGTTCTGGAATATGCAAATATTGCTAGATTTACCTTTGCATTGTATTTTCCATTTCAGCGGATTCGTTATCAGTGGAGTCGTTGCTGGAACTTCTGGATGAGGATAGCTTACGGAAAGACACTGCGCTTCCTTCACCTGAATGGTCATCAGATCATATAGCACTCTTAGCAGAATTTCGGTGCAAGCCTAGAGTTAGACGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011933