BGIOSGA011938

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Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011938| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011938, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011938

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011938, complete gene.

LocusTag

OSJNBA0091P11.14

Ensembl Transcript ID

BGIOSGA011938-TA

Ensembl Protein ID

BGIOSGA011938-PA

Length

2855

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4104207..4107061

Sequence Coding Region

4104207..4104525,4104619..4104722,4104833..4105032,4105150..4105250,4105369..4105582
,4105696..4105857,4105970..4106051,4106126..4106559,4106842..4107061

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4104207..4107061 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4104207..4107061 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATGAGTTCATGCGTGAACCTATCCCGTGTCGCCGCCGCCGCCGCAGGGAGACGGCCGGGATTTGCCGGTGAGCTGGGAGGTCGCCGTGGTCATGGCAGAAGCGTGCTTCCGGTTGTTGCTGCACTGCCGGTGAGGAGGAAGGGAAGCGGTTGTGGCGTGGCGTGCTGCGTCTCCTCCTCGTCTTCCTCCTCCGTGCACGGCAAGAACTCGGCGGCGGCGGCGGCGGAGGGTCACGCCGGCGGCATTGGGATCGCGGAGTTCCTCGGCGGCAAGAACTTCCTCATCACCGGCGGAACCGGGTTCCTGGCAAAAGTTCTCATCGAGAAGATATTGCGGACGAATCCCGACGTTGGCAAGATCTACGTGCTGATCAAGGCGAAGGACAGTGACGCAGCACTGAAAAGATTGCACAACGAGGTTGTGGACACAGAATTGTTCAGTCGTTTGCAGGAAATCCATGGCAAGGATTACCACAGCTTCGCGGCAAGAAAGCTGGTGCCTGTAGTCGGAGATGTCAGAGAAGCCAACGTTGGCATCGCCCCTGAGCTTGCCGGCGTGATCGCCGACGAGGTCGACATCATCGTCAACTCAGCAGCAAACACCACTTTCGACGAGAGGTACGATGTTGCAATGGACATCAACACCGTAGGGCCATTCAGGATAATGAGCTTCGCGCAGCGGTTTCGGAGGCTGAAGCTGTTCTTGCAAGTGTCAACAGCATATGTGAACGGACAGAGGCAAGGTGTGGTGCTAGAGAAGCCATTTCGCTTGGGGGACACCATAGCCAAGGAGTTAGGATCTCCAGATTCTTCACAACACAAGAACACCATGCTTGACATCGAGGCAGAGATCAAGCTGGCTTTTGACCACAGGAGACACGGTGATGATTCAGCCTCTTTCTCTGAAGAAATGAAAGAGTTAGGATTAGAGAGGGCAAAACTCCATGGGTGGCAAGATACATATGTGTTCACCAAGGCCATGGGAGAGATGGTGATCAACTCCATGCGAGGAGATATACCGGTTGTCACCATCAGGCCAAGCGTCATCGAGAGCACCTGGAGGGATCCCTTCCCCGGTTGGATGGAAGGGAACAGGATGATGGATCCTGTTGTGCTGTACTACGGCAAAGGCCAGCTGAGCGGGTTCCTCGCTGACCCGGAGGGTGTTCTTGACGTGGTTCCGGCGGACATGGTGGTGAACGCAACGCTGGCGTCGATGGCGAAGCACGGGCGCGGCGGCGCGGCGGCGGCGGCCGCGGCGGCGGAGGGGATGCACGTGTACCACGTGGCGTCGTCGACGGTGAACCCGCTGGCGTTCGGCGACCTGAGCCGGTTCCTCTTCCAGCACTTCACGGGGTCGCCGTACAGCGACGCGGCGGGGCGGCCCATCCACGTACCGCCGATGCGGCTGTTCGACACCATGGAGCAGTTCGCCAGCTACGTCGAGACCGACGCGCTGCTGCGCGCCGGCCGCCTCGCCGGCGCCGGCGCCGGCGCCGGCGCCGGAGACGAGAGGGTGTCGCAGCGGCTGCGCGAGCTCTGCGCCAAGTCCGTCGAGCAGACCATCTACCTCGGCAGCATCTACCAGCCCTACACCTTCTACGGCGGCAGGTTCGACAATGGGAACACGGAGGCGCTGATCGGGGAGATGTCGGAGGAGGAGAAGGCGCGGTTCCACTTCGACGTGAGGAGCATCGAGTGGACGGACTACATTACCAACGTGCACATCCCGGGGCTCAGGAAGCACGTCATGAAGGGGAGGGGCGTCGGCGGCGGCAGCGGCGCGTCGTCGTCATCGAACGCCTCGCTGCTCGCCGGCGCCTCCGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MGMSSCVNLSRVAAAAAGRRPGFAGELGGRRGHGRSVLPVVAALPVRRKGSGCGVACCVSSSSSSSVHGKNSAAAAAEGHAGGIGIAEFLGGKNFLITGGTGFLAKVLIEKILRTNPDVGKIYVLIKAKDSDAALKRLHNEVVDTELFSRLQEIHGKDYHSFAARKLVPVVGDVREANVGIAPELAGVIADEVDIIVNSAANTTFDERYDVAMDINTVGPFRIMSFAQRFRRLKLFLQVSTAYVNGQRQGVVLEKPFRLGDTIAKELGSPDSSQHKNTMLDIEAEIKLAFDHRRHGDDSASFSEEMKELGLERAKLHGWQDTYVFTKAMGEMVINSMRGDIPVVTIRPSVIESTWRDPFPGWMEGNRMMDPVVLYYGKGQLSGFLADPEGVLDVVPADMVVNATLASMAKHGRGGAAAAAAAAEGMHVYHVASSTVNPLAFGDLSRFLFQHFTGSPYSDAAGRPIHVPPMRLFDTMEQFASYVETDALLRAGRLAGAGAGAGAGDERVSQRLRELCAKSVEQTIYLGSIYQPYTFYGGRFDNGNTEALIGEMSEEEKARFHFDVRSIEWTDYITNVHIPGLRKHVMKGRGVGGGSGASSSSNASLLAGASV</aaseq>

Gene Sequence

<dnaseqindica>1..319#413..516#627..826#944..1044#1163..1376#1490..1651#1764..1845#1920..2353#2636..2855#ATGGGGATGAGTTCATGCGTGAACCTATCCCGTGTCGCCGCCGCCGCCGCAGGGAGACGGCCGGGATTTGCCGGTGAGCTGGGAGGTCGCCGTGGTCATGGCAGAAGCGTGCTTCCGGTTGTTGCTGCACTGCCGGTGAGGAGGAAGGGAAGCGGTTGTGGCGTGGCGTGCTGCGTCTCCTCCTCGTCTTCCTCCTCCGTGCACGGCAAGAACTCGGCGGCGGCGGCGGCGGAGGGTCACGCCGGCGGCATTGGGATCGCGGAGTTCCTCGGCGGCAAGAACTTCCTCATCACCGGCGGAACCGGGTTCCTGGCAAAAGGTAGTAAATCTATCTTCTTCCTCTCTTAAATTTGGATCATCCAACGTACGTAGCTCGCGTCTCTTCTTGATTTTGCTTGATCATCTGGATCAGTTCTCATCGAGAAGATATTGCGGACGAATCCCGACGTTGGCAAGATCTACGTGCTGATCAAGGCGAAGGACAGTGACGCAGCACTGAAAAGATTGCACAACGAGGTTCTACTTGCGATCATTGTTCGATCCATTTCAGAGAAACATATGTTAGTACCTATCTGTTCATCTGTTTGACTGTATTTTTCCTTTTGTTTTAACTGTGTGATGTGCAGGTTGTGGACACAGAATTGTTCAGTCGTTTGCAGGAAATCCATGGCAAGGATTACCACAGCTTCGCGGCAAGAAAGCTGGTGCCTGTAGTCGGAGATGTCAGAGAAGCCAACGTTGGCATCGCCCCTGAGCTTGCCGGCGTGATCGCCGACGAGGTCGACATCATCGTCAACTCAGCAGCAAACACCACTTTCGACGAGAGGTTTTGTCATTCTCTGAACTGCAGTGTTGCTCCAAAGATGAGTTCTTAATTGGATCACTTCATGTATTATAAGCATATGAATTGATCACTGTTGCTGCATTTGGTTCGATTTTGCAGGTACGATGTTGCAATGGACATCAACACCGTAGGGCCATTCAGGATAATGAGCTTCGCGCAGCGGTTTCGGAGGCTGAAGCTGTTCTTGCAAGTGTCAACAGGTCAGAAATGCATGTCAAATGAAAAGCTCTTGTGCTGAAAACTTGCACTGAAATTACCTCCAAAAACCTTAGATATATCTCTCTACTGTGGATTTTGAATTTCATGTTTGGCAATCAGCATATGTGAACGGACAGAGGCAAGGTGTGGTGCTAGAGAAGCCATTTCGCTTGGGGGACACCATAGCCAAGGAGTTAGGATCTCCAGATTCTTCACAACACAAGAACACCATGCTTGACATCGAGGCAGAGATCAAGCTGGCTTTTGACCACAGGAGACACGGTGATGATTCAGCCTCTTTCTCTGAAGAAATGAAAGAGTTAGGATTAGAGAGGTATACACGCAATGCCAGAAACGTTTCAAGTCTGAATGTGCAGTGGCAAGATTATGCAATTGCACACATGAAACAGCATTGGTTAATTCGCTTGATTTGGGTTTAATTTGTAGGGCAAAACTCCATGGGTGGCAAGATACATATGTGTTCACCAAGGCCATGGGAGAGATGGTGATCAACTCCATGCGAGGAGATATACCGGTTGTCACCATCAGGCCAAGCGTCATCGAGAGCACCTGGAGGGATCCCTTCCCCGGTTGGATGGAAGGGAACAGGTACAAATTGTAAATCAAAGTTCACCAACTTAAACCAATTTTAGTTCATGAGATAATTTAGTTTACGATGAATTGGCATTGATTTTGGCGAAATGAATTTGAGCTTGATTAGGATGATGGATCCTGTTGTGCTGTACTACGGCAAAGGCCAGCTGAGCGGGTTCCTCGCTGACCCGGAGGGTGTTCTTGACGTGGTAATGATTAAGCAGTAAATTCGCTAATTGCGATTAGTGGTTAATCGATTAACTATGGCGATTTGTGATGGAAGGTTCCGGCGGACATGGTGGTGAACGCAACGCTGGCGTCGATGGCGAAGCACGGGCGCGGCGGCGCGGCGGCGGCGGCCGCGGCGGCGGAGGGGATGCACGTGTACCACGTGGCGTCGTCGACGGTGAACCCGCTGGCGTTCGGCGACCTGAGCCGGTTCCTCTTCCAGCACTTCACGGGGTCGCCGTACAGCGACGCGGCGGGGCGGCCCATCCACGTACCGCCGATGCGGCTGTTCGACACCATGGAGCAGTTCGCCAGCTACGTCGAGACCGACGCGCTGCTGCGCGCCGGCCGCCTCGCCGGCGCCGGCGCCGGCGCCGGCGCCGGAGACGAGAGGGTGTCGCAGCGGCTGCGCGAGCTCTGCGCCAAGTCCGTCGAGCAGACCATCTACCTCGGCAGCATCTACCAGCCCTACACCTTCTACGGCGGCAGGTTTGTTTCCTAGATCGTTAGTTTTATTTAAAAATTTTTGTGAAATATATAAAATTATATGTATATGTATAAGTATATTTAACAATAAATTAAATAATATAAAAAAATTAATAATTATTTAATTTATTTTTAATAAAACTAATGATCAAATATATTTAAAAAATTCGATGGCATAAAATATTTAGAAACGGAGGAGTATATTCGTATATACCCGCCATGGATAATGCATTGTGAATTTGAGATGCTGATGAGCTCGATCGCCGGCCATGGCGGCGGCGGCAGGTTCGACAATGGGAACACGGAGGCGCTGATCGGGGAGATGTCGGAGGAGGAGAAGGCGCGGTTCCACTTCGACGTGAGGAGCATCGAGTGGACGGACTACATTACCAACGTGCACATCCCGGGGCTCAGGAAGCACGTCATGAAGGGGAGGGGCGTCGGCGGCGGCAGCGGCGCGTCGTCGTCATCGAACGCCTCGCTGCTCGCCGGCGCCTCCGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011938