BGIOSGA011940

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Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011940| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011940, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011940

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011940, complete gene.

LocusTag

OSJNBA0091P11.34

Ensembl Transcript ID

BGIOSGA011940-TA

Ensembl Protein ID

BGIOSGA011940-PA

Length

3134

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4127448..4130581

Sequence Coding Region

4127448..4127611,4127764..4127833,4127934..4128130,4128229..4128304,4128614..4128697
,4129067..4129146,4129242..4129368,4129547..4129606,4129694..4129744
,4129832..4129990,4130115..4130247,4130364..4130581

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4127448..4130581 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4127448..4130581 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGACGCGAAGGGCGACGAGGTGTTGGCGGAGGGACAGATGCCTCTGGGACGGTGGCCGATCCTGTCCTACGGTGTCGGCCACATGCTGAATGACATCACGTCTGCCTGCTGGTTCACTTACCTGCTCCTCTTCTTGCAAGAAATCGGGCTTGCTCCAAGGGATGCAGCTATTGTGATGCTTTCTGGCCAGGTTGCAGATGGCCTAATGACGATTCTTGCAGGCGAGATGATCGACCGATTTGGGCACTTCAAGCTGTGGCACATCGGAGGATCAATCCTAGTCGGCATCTCCTTCTCCTCTGTCTTCGGTGGATGTCTTCTCTGCACCGTCCTGGGGACCGATTCCTACCTTGTGAGAACCATTGGTTACAGCTTCTTCGCTGCCGTCTTCAACATCGGCTGGGCGGCCACACAAGTTTCACACATGTCAATGGTGAACTGCATGACACTGAATTCCACAAGCCGGGTAGCCTTAGCAAGCTGCAGAAATGCGTTCACTATGGTGGCAAATCTTGGTTTATATGCGATAGCTTTGGTTGTATTTGCTTTAGTGAGCGCGAAGGCATGCTCAGACATTGTTCTTCAGTACCGTTGGATAGCGTACGTTTCAATTTTTGTGGGATGCTGCTTCCTAGTGGTGTTCTATGCTGGAACAAGGGAGCCGACTTTGCAGTCGGGATCTGACTGCAAGAAATCGGCTAGGATTTCCTGGGGCTACTGGTTCAAGAAGGCCTTGTACTACCAAGTCGCTCTGTTGTATATGCTTGCAAGATTGATCACAAATGTCTCTCAGTCTCTCATCGCGTTCTACGTCACTAGAGACTTGAAGATGAATGAGTACTCCAAAGCGATTATACCAGCCATCATATTTTGCTGCAGCTTCCTCGTCTCTGTTGTTCTCCAGGAGATAAAGTGGAACAGCCGCCGCCTGAAGTCGCTCCTCACCATCGGAGCAATACTCTGGGTGATCGCTGGAGCCGCCGTCTTCGTCCTCCCGAGTCAGATGCATAACCTTATGTACCCTCTCGCTATGGTCATCGGAGCTGCAAACGCCCTCGTCATGGTGACCACAATTGGGCTAGAGAGCGCGCTGGTAGGAGACGACTTGAACGGCTGCGCCTTCGTCTACGGCTCGCTCAGCTTCCTGGACAAGATGTCGTGTGGAATCGCCTTGTTTGTTCTAGAATCATACGAAGATTCGATTAGCTGCGGCGAGACGAGGGGGCTGTACACGGTGAGCAGGTTTGGGACAGGTCTGATCCCCTCGTGCTTTGCCACGGTGAGCAGGTTTGGGACAGGTCTGATCCCCTCGTGCTTTGCCGTCTTCGCGCTGCTGGTCACCTCAACCCTGAAGCTCCAGGACACCAACCCGAGAGCTGCCGCCGCTGCACTGGAAGCTCCACTCCTCGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MADAKGDEVLAEGQMPLGRWPILSYGVGHMLNDITSACWFTYLLLFLQEIGLAPRDAAIVMLSGQVADGLMTILAGEMIDRFGHFKLWHIGGSILVGISFSSVFGGCLLCTVLGTDSYLVRTIGYSFFAAVFNIGWAATQVSHMSMVNCMTLNSTSRVALASCRNAFTMVANLGLYAIALVVFALVSAKACSDIVLQYRWIAYVSIFVGCCFLVVFYAGTREPTLQSGSDCKKSARISWGYWFKKALYYQVALLYMLARLITNVSQSLIAFYVTRDLKMNEYSKAIIPAIIFCCSFLVSVVLQEIKWNSRRLKSLLTIGAILWVIAGAAVFVLPSQMHNLMYPLAMVIGAANALVMVTTIGLESALVGDDLNGCAFVYGSLSFLDKMSCGIALFVLESYEDSISCGETRGLYTVSRFGTGLIPSCFATVSRFGTGLIPSCFAVFALLVTSTLKLQDTNPRAAAAALEAPLLV</aaseq>

Gene Sequence

<dnaseqindica>1..164#317..386#487..683#782..857#1167..1250#1620..1699#1795..1921#2100..2159#2247..2297#2385..2543#2668..2800#2917..3134#ATGGCTGACGCGAAGGGCGACGAGGTGTTGGCGGAGGGACAGATGCCTCTGGGACGGTGGCCGATCCTGTCCTACGGTGTCGGCCACATGCTGAATGACATCACGTCTGCCTGCTGGTTCACTTACCTGCTCCTCTTCTTGCAAGAAATCGGGCTTGCTCCAAGGTAATCATTGCTAATTAATTAATTAAACCCACGTAGACAACAGCTCACAATCACACTAGTGGTCTGTGTGGAATTTCGATTTGTCTGAAGCAAAGTAATGTTGCTGCAGCAGCTCAGTTTATTAATCATGGCTTGTGTTCAATTTCTTGCAGGGATGCAGCTATTGTGATGCTTTCTGGCCAGGTTGCAGATGGCCTAATGACGATTCTTGCAGGCGAGATGGTACTAAATAAATTGAGAAACCGTTTGCTATTGCTGAATGCGCGCTGATTAGCAAAATACAGTAACTGATCTGTGAGCAATGTATGTGGTATCTGATCAGATCGACCGATTTGGGCACTTCAAGCTGTGGCACATCGGAGGATCAATCCTAGTCGGCATCTCCTTCTCCTCTGTCTTCGGTGGATGTCTTCTCTGCACCGTCCTGGGGACCGATTCCTACCTTGTGAGAACCATTGGTTACAGCTTCTTCGCTGCCGTCTTCAACATCGGCTGGGCGGCCACACAAGTTTCACACATGTAAATTTGATCACTTGAACGTTGACAGAAGCTTCTATCTAATTTGCAATATGTTTGGGCTCTGGCTTGGCATAGTGACATGGTTTTCTTCCTCTCAGGTCAATGGTGAACTGCATGACACTGAATTCCACAAGCCGGGTAGCCTTAGCAAGCTGCAGAAATGCGTTCACTATGGTAAGTACTACAGTTTTAGCATGGAAACATATTATTACTAGAATACTCTTTTTTTACTTAAGGTATCTCCGGGAAATTTCTTCCACTGAACTCTTGTTATTATAATAACCTTTTGCACATGACAAAGTGCATTGTTTCTATACCAAAGATGGTAGTATTCTTTTACTGCCATCTTTTATCTGATTGAAGGTGGCCTGATATGTGCTTCAAAAATAATTCCTACTTGTTTAGTCTCCTGTGTCTTGTACCACTGCAATCATTGTTCTCATGAGGAAGATGCTCACCAGTCACTACAAATGGAAAATGCAGGTGGCAAATCTTGGTTTATATGCGATAGCTTTGGTTGTATTTGCTTTAGTGAGCGCGAAGGCATGCTCAGACATTGTTCTTCAGGTGACTGCCTAACCTCGTCAGTTGTTAGATTTGGGTTTCTTGGTCAGTAAAAGATACTCCCTCCATTTTTTAATAGATGACGCCGTTGACTTTTTCTCACATGTTTGACCATTCGTCTTATTCAAAAAATTTACGTAATTATAATTTATTTTGTTATGAGTTCTTTTATCACTCATAGTACTTTAAGTGTGATTTATATCTTATACATTTGCATAAAATTTTTGAATAAGACGAATGGTCAAACATGTGAGAAAAAGTCAATGGCGTCATCTATTAAAAAACGGAGGTAGTATGATTTTACAGACCAGAGACTTACCTCCATGTACAATAGTATACTTGTTACTAAGTTGTTCGTATATTTATCTGCAGTACCGTTGGATAGCGTACGTTTCAATTTTTGTGGGATGCTGCTTCCTAGTGGTGTTCTATGCTGGAACAAGGGAGCCGACGTATGTTTTTCTTTTTTCAGCGTAGAATAATGCATTAGACTTTTTTTTGGGCCGTGAAGGGTGTTTTCTGAAAGGGAGTGAATTTGGTTTTGCAGTTTGCAGTCGGGATCTGACTGCAAGAAATCGGCTAGGATTTCCTGGGGCTACTGGTTCAAGAAGGCCTTGTACTACCAAGTCGCTCTGTTGTATATGCTTGCAAGATTGATCACAAATGTCTCTCAGGTTGACATCGTCCCCACTCAGAATAGAAAATATTCTTAATTACTACTAGCAACATGAAAATGCACATTGCATACTCTACCATATCTGTTCCACTGTGACACTGATTGCCAAATACGCATTTCGCTCCCTAAGTTTTCTCTCAAGTCTGAACATTAGTCTAAAAGAATTTTTTTTTCAGTCTCTCATCGCGTTCTACGTCACTAGAGACTTGAAGATGAATGAGTACTCCAAAGCGATTGTGAGCTTTCAAACCTTTTTGGTTAACCTCTGTCCTTAGAAGATACCAATCATCTAATTCTCTAATTTTTGACCTGCATATATGCAGATACCAGCCATCATATTTTGCTGCAGCTTCCTCGTCTCTGTTGTTCTCCAGGTCTACTCCTGTCAGTTAACCACTTATACTAGAACTAGAATATAACAAGTTAAGTTTTTTCTCACGTATTTTGCAAGTAAAATGCAGGAGATAAAGTGGAACAGCCGCCGCCTGAAGTCGCTCCTCACCATCGGAGCAATACTCTGGGTGATCGCTGGAGCCGCCGTCTTCGTCCTCCCGAGTCAGATGCATAACCTTATGTACCCTCTCGCTATGGTCATCGGAGCTGCAAACGCCCTCGTCATGGTAAAGAACAACAAGAACTGCACTTCTCATTTAGAGAACAAGAACTGCAATTGTCATTTTTGCGTGATGGGACGGATGATCTTCGAGTTCTGCTTATGCTCATGTGTGCTGATTTCCTGATCAGGTGACCACAATTGGGCTAGAGAGCGCGCTGGTAGGAGACGACTTGAACGGCTGCGCCTTCGTCTACGGCTCGCTCAGCTTCCTGGACAAGATGTCGTGTGGAATCGCCTTGTTTGTTCTAGAATCATACGAAGGTATCCGCTGTAAAAATGGCATATTTCAGCGCATTAACCACCTAAATTCAGGATGCTTTGGTTTGTGGATACAATTGATGAACACTCATTGAAATTATGTTTCTCTCTTATTGCAGATTCGATTAGCTGCGGCGAGACGAGGGGGCTGTACACGGTGAGCAGGTTTGGGACAGGTCTGATCCCCTCGTGCTTTGCCACGGTGAGCAGGTTTGGGACAGGTCTGATCCCCTCGTGCTTTGCCGTCTTCGCGCTGCTGGTCACCTCAACCCTGAAGCTCCAGGACACCAACCCGAGAGCTGCCGCCGCTGCACTGGAAGCTCCACTCCTCGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011940

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011940&oldid=56763"