BGIOSGA011941

From RiceWiki
Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011941| Description = Expressed proteinOs03g0168200 proteinPutative| Definition = Oryza sativa Indica Group BGIOSGA011941, complete gene.| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011941

Description

Expressed proteinOs03g0168200 proteinPutative

Definition

Oryza sativa Indica Group BGIOSGA011941, complete gene.

LocusTag

OSJNBA0091P11.31

Ensembl Transcript ID

BGIOSGA011941-TA

Ensembl Protein ID

BGIOSGA011941-PA

Length

1794

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4133854..4135647

Sequence Coding Region

4133854..4134211,4134868..4134967,4135060..4135180,4135324..4135419,4135525..4135647

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4133854..4135647 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4133854..4135647 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCTTGCTTGCCATCCCTCTCACCGGCGCCGCATCAGGCGCCGGTGCCGGCGGCGACGACCGCGCTGGCGGGGAANCTGACCTCGTCCCTCCTCTCCCTGCCCCCGCCGCTGCCCCGCCTCGCCGTCTCGCACCGCAGGGCGGTGGTCGCCGCGGCCTCGTCCCGGCCCCCGCCCCCGCCATCGCGGGAGGGGGGTGATGGTGGTGGTGAGGAGGAGGAGGAGGTGGAGAGGGCGATGGGGATGGACGGCGGCATCCCTGGCACCTCCGGCGAGTTCCTGCGCCGCGTCTCCTCCCGCGCGTACGGCATGCGGCGCCACCTCATGGAATCGCTCGACTCCCTCGCCTACGATGTGTTGGAGACAAACCCATGGAGAGAAGACTCCAAACCAGTCTATGTACTGGCTAGAAGAGATAACCATCTATGGACAATGAAAACCCGTAGGAGTCGCAGTGAAGTTGAAAGGGAACTTGGAATGCTCTTAAAGGGAGGGGGTTCAGGAGTTGGGACTAAATCAAAATACTCTGGTTCCAAGTTTAACATGCTTGTTGAAGATATCAGAGAGGGAATACTGGTATTTGAAGACGAGGACGATGCTGCAAAATACTGTGACATTCTACAAGGTGGCGGCCAAGGTTGTGAGGGGATTGCAGAGATAGAGGCATCATCGGTTTTCAACATCTGCCATAAAATGAAAGCTCTTGCCGTCCTTTTCCGTCGTGGTAGGACCCCTCCATTGCCTCAAAGCCTTGAGCGCGACTTAAGGGCAAGAAAGAGATCATTGGAAGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAACLPSLSPAPHQAPVPAATTALAGXLTSSLLSLPPPLPRLAVSHRRAVVAAASSRPPPPPSREGGDGGGEEEEEVERAMGMDGGIPGTSGEFLRRVSSRAYGMRRHLMESLDSLAYDVLETNPWREDSKPVYVLARRDNHLWTMKTRRSRSEVERELGMLLKGGGSGVGTKSKYSGSKFNMLVEDIREGILVFEDEDDAAKYCDILQGGGQGCEGIAEIEASSVFNICHKMKALAVLFRRGRTPPLPQSLERDLRARKRSLED</aaseq>

Gene Sequence

<dnaseqindica>1..358#1015..1114#1207..1327#1471..1566#1672..1794#ATGGCAGCTTGCTTGCCATCCCTCTCACCGGCGCCGCATCAGGCGCCGGTGCCGGCGGCGACGACCGCGCTGGCGGGGAANCTGACCTCGTCCCTCCTCTCCCTGCCCCCGCCGCTGCCCCGCCTCGCCGTCTCGCACCGCAGGGCGGTGGTCGCCGCGGCCTCGTCCCGGCCCCCGCCCCCGCCATCGCGGGAGGGGGGTGATGGTGGTGGTGAGGAGGAGGAGGAGGTGGAGAGGGCGATGGGGATGGACGGCGGCATCCCTGGCACCTCCGGCGAGTTCCTGCGCCGCGTCTCCTCCCGCGCGTACGGCATGCGGCGCCACCTCATGGAATCGCTCGACTCCCTCGCCTACGATGGTAAGAGTTGTCGGATCCTCACCCTCTTTTCGTGGATCGTATACGTTCTTGATCGATTATTAAGGAGTAAAAGAAAAAAAAATCTTCGATCGATTTAGGGGTTTTAGTTTTTACTAGGGGGTTTACCGAGATCGCTCGATAAACTGCGTTCTCCATACTCTTGAAGTGTCCGAAGATTTCATCTTTATCTGTTTGATTTGGCATCAGCACCAGCGACGTGAGGCTTGTACGTGCACGCGTACATACCGTATTTCGTGATATACGTGTGATTCGAGGTTTGCCTAGTTAAGACTTAAGAGCATGCGTGTACGTGACAATTAACAGTAACAATCTCTAGCTATTTCCACAGTTTTTGGCTCTGCTCAATGTATCGAGATTTGGATGTTGACATGTCATTGTAACAAAGTGCTGAATTGACATGTATGCTGTAGTAAAACATACCATCCTGCATTCAGTAGTATCAGAAACACTGATCCCCACTCCCTAGTTAAGCTTTATATTTTAACACTTTGATTTTTCAATCAAAGATCGGTTAGAAATGGTGTTCAAAAGATTTATGCTTTTAGAAATGCTGTTTTCTTTGTATGCTTTGCTAAACTGTTTTACAAGCATGGCAGTCTGAAATTTTACTAACTGGTGTTTTTCTTCTGGTTCAGTGTTGGAGACAAACCCATGGAGAGAAGACTCCAAACCAGTCTATGTACTGGCTAGAAGAGATAACCATCTATGGACAATGAAAACCCGTAGGAGTCGCAGGTTAGAGTAATTTTGCTGCTGTTGCGCTTACACGTGTAATTTTGCTGTTACTGAACATTCTGAACAAGTCATGTTATCTCTATTTTCTTCAGTGAAGTTGAAAGGGAACTTGGAATGCTCTTAAAGGGAGGGGGTTCAGGAGTTGGGACTAAATCAAAATACTCTGGTTCCAAGTTTAACATGCTTGTTGAAGATATCAGAGAGGGAATACTGGTGAGTAGTTAAAGAGAGGGGTTAAATTTTGTGGATGATTTCTTTGAGAACCGACTAGGTGTCCTGCTTTTCCTCTGGGTTTTCAGTTGTTTACATAGCTACTTGCTTGACATTCTCTTGAATCATATCATCCTTTGTCTCAGGTATTTGAAGACGAGGACGATGCTGCAAAATACTGTGACATTCTACAAGGTGGCGGCCAAGGTTGTGAGGGGATTGCAGAGATAGAGGCATCATCGGTAAGAAATTTGGTGGACATGGGTCTTCATAGTACCAATTTGTGGTTGGCAATTGATCATAGTAGTAGTACTTATGTACCGGGTTACACTCGTTCTTGTCTGCAGGTTTTCAACATCTGCCATAAAATGAAAGCTCTTGCCGTCCTTTTCCGTCGTGGTAGGACCCCTCCATTGCCTCAAAGCCTTGAGCGCGACTTAAGGGCAAGAAAGAGATCATTGGAAGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011941