BGIOSGA011946

From RiceWiki
Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011946| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011946, complete gene.| tag = OsI_101...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011946

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011946, complete gene.

LocusTag

OsI_10185

Ensembl Transcript ID

BGIOSGA011946-TA

Ensembl Protein ID

BGIOSGA011946-PA

Length

4263

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4180378..4184640

Sequence Coding Region

4180378..4180752,4181473..4181571,4182578..4182830,4183277..4183387,4183460..4183596
,4183880..4184079,4184166..4184363,4184478..4184640

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4180378..4184640 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4180378..4184640 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGGCAGTGGGGGCGGTGGCGGCTCGCCGCAGCAGCAGCCGCCTCCTCCTCGGGGGACCAGATCGCGGCGGCGTGGGCGGTGGTGCGGGCGCGGGCGGTGGCGCCGGTGCTGCAGTTCGCGGTGTGGGCGTGCATGGCGATGTCGGTGATGCTGGTGCTGGAGGTGGCCTACATGAGCCTCGTCAGCCTCGTCGCCGTCAAGCTGCTGCGGCGGGTGCCGGAGCGGAGGTACAAGTGGGAGCCCATTACCACTGGGAGCGGCGGCGTCGGCGGCGGCGATGGCGAAGACGAGGAGGCGGCGACGGGCGGGCGGGAGGCGGCGGCGTTCCCGATGGTGCTCGTGCAGATCCCCATGTACAATGAGAAGGAGGTGTACAAGCTCTCTATTGGAGCTGCATGTGCTCTCACGTGGCCTCCGGACCGTATTATAATCCAAGTCTTGGATGATTCCACTGATCCGGCCATTAAGGATCTAGTGGAGCTTGAGTGCAAGGATTGGGCGAGAAAAGAAATTAACATAAAGTATGAAATCAGAGATAACAGGAAGGGATACAAAGCAGGAGCCTTGAAGAAGGGCATGGAACATATCTATACCCAACAGTGCGATTTTGTTGCCATTTTCGATGCAGATTTCCAACCTGAATCTGATTTCCTTCTAAAAACAATACCATTTCTTGTGCATAACCCAAAGATTGGTCTGGTTCAGACACGTTGGGAGTTTGTGAACTATGATGTTTGCCTTATGACAAGGATACAAAAGATGTCACTGGACTATCATTTCAAAGTAGAGCAGGAATCAGGCTCATCTATGCACTCATTCTTTGGGTTCAACGGTACTGCTGGTGTGTGGCGGGTATCAGCTATTAACGAAGCAGGAGGTTGGAAGGATCGCACAACTGTGGAAGACATGGACTTGGCTGTACGGGCAAGCCTCAAGGGATGGCAATTCCTGTATGTTGGTGATATAAGGGGCGTATCTGTATGGAAAAAACTTCATCTACTCTACAGCTTTTTCTTCGTAAGGAGGGTCGTCGCTCCCATCCTGACCTTCCTGTTCTACTGTGTTGTGATTCCGCTGTCTGTCATGGTCCCTGAAGTCAGCATTCCTGTCTGGGGGATGGTCTACATTCCCACTGCCATTACCATCATGAACGCCATCAGAAATCCTGGGTCCATCCATCTGATGCCTTTTTGGATTCTATTCGAGAATGTCATGGCCATGCACCGGATGCGTGCAGCTCTAACCGGCTTGCTCGAGACCATGAATGTCAATCAGTGGGTGGTTACTGAAAAGGTTGGTGATCATGTGAAGGACAAGCTTGAAGTCCCTCTTCTTGAACCATTGAAGCCAACAGACTGCGTCGAGAGGATTTACATTCCTGAGCTTATGGTCGCGTTCTACCTCCTGGTATGCGCGTCTTACGATTTGGTGCTCGGGGCCAAGCACTACTACCTGTACATCTACCTCCAGGCATTTGCTTTCATTGCTCTGGGATTCGGTTTCGCTGGGACATCTACCCCCTGTTCATAG</cdnaseq>

Protein Sequence

<aaseq>MEGQWGRWRLAAAAAASSSGDQIAAAWAVVRARAVAPVLQFAVWACMAMSVMLVLEVAYMSLVSLVAVKLLRRVPERRYKWEPITTGSGGVGGGDGEDEEAATGGREAAAFPMVLVQIPMYNEKEVYKLSIGAACALTWPPDRIIIQVLDDSTDPAIKDLVELECKDWARKEINIKYEIRDNRKGYKAGALKKGMEHIYTQQCDFVAIFDADFQPESDFLLKTIPFLVHNPKIGLVQTRWEFVNYDVCLMTRIQKMSLDYHFKVEQESGSSMHSFFGFNGTAGVWRVSAINEAGGWKDRTTVEDMDLAVRASLKGWQFLYVGDIRGVSVWKKLHLLYSFFFVRRVVAPILTFLFYCVVIPLSVMVPEVSIPVWGMVYIPTAITIMNAIRNPGSIHLMPFWILFENVMAMHRMRAALTGLLETMNVNQWVVTEKVGDHVKDKLEVPLLEPLKPTDCVERIYIPELMVAFYLLVCASYDLVLGAKHYYLYIYLQAFAFIALGFGFAGTSTPCS</aaseq>

Gene Sequence

<dnaseqindica>1..375#1096..1194#2201..2453#2900..3010#3083..3219#3503..3702#3789..3986#4101..4263#ATGGAGGGGCAGTGGGGGCGGTGGCGGCTCGCCGCAGCAGCAGCCGCCTCCTCCTCGGGGGACCAGATCGCGGCGGCGTGGGCGGTGGTGCGGGCGCGGGCGGTGGCGCCGGTGCTGCAGTTCGCGGTGTGGGCGTGCATGGCGATGTCGGTGATGCTGGTGCTGGAGGTGGCCTACATGAGCCTCGTCAGCCTCGTCGCCGTCAAGCTGCTGCGGCGGGTGCCGGAGCGGAGGTACAAGTGGGAGCCCATTACCACTGGGAGCGGCGGCGTCGGCGGCGGCGATGGCGAAGACGAGGAGGCGGCGACGGGCGGGCGGGAGGCGGCGGCGTTCCCGATGGTGCTCGTGCAGATCCCCATGTACAATGAGAAGGAGGTGAGGCGTTGGAACTCTCCCTTTTCCCCCCTTCCACTGCTGAATTTCGTGATCGATCAGTGTACGATCCGCTTCGGAATCGGAAGCGTGCATCCAAATCTCCCAGCGATGGTTGGACAGGCTTGCTTAATGCTCTAGCGCTTTTTCACTTTCACATGTGACATTTTGCGAGGCATTGCTTCAGCTCTCGTTCTTGTTAATCCGCAATGCATTGCTTCGCAGCTCTCGCTGTTGTTAATCTCTTCTAATTGTGTGGCGCATTTGCGCTGATATTTTAGTCTGTTGATTTAGAATTTGTTCTTCCGAGCCTCTGAATCAGCCGCTGGAATAATGGCTCGTGGGACCCTGTCTGTGCTCAGATCACTAGGACTTAGTTACATGTGGGGTTTTGTTTTATCAATATAGCGACATAGCGTGCCCGCTAGATGCTACCGGATGAGGGCCCACATTGCGGGCCTTGCAAAGCAAACCAGGTTGCAGAACTGTTTTGTAGTTCAGCAATATCCAGGAGCTAACTAATCCAGGAAATTATTGTTAAGGGCAATTTACAATCGCCATCTAATGGGTTTAGCATTCTGTCTATTTGGTGGAGATGTTAACTAAGACTGCGCGTTGAATGTTAGTTGTTTTTGTCTGACAAGCATCCAAGTAATGTTTCAAAGAATTTGCTAATTGGTTTCCAGCATGTGAAAATGTGATGCATCTGCCATTCTTGTGCAGGTGTACAAGCTCTCTATTGGAGCTGCATGTGCTCTCACGTGGCCTCCGGACCGTATTATAATCCAAGTCTTGGATGATTCCACTGATCCGGCCATTAAGGTAAGTTAAACTTCTGCATACATGCTTAGTTTTCTCCTTTACTCGAGCCAAGTATTTTCAGAAGTCATGCATGGCAAATTGGCGGTGCAAAGGGCTTTGATGAAGAGACGGTCCATGCAATGTTCATGTCAAACAAGTAGCTAGTTCCTCATAGTTCTTGTTGCTTCCTTTTATGGTTTACGTTGTTCAGTTGTGGAGTGCAGAAGGATGATGGCTCATAATCCTGTGGATTAACCAAGTACACCCCACATATTTCTGTGAGTTGACCACGCAGAATAGAACGGTTGATGATCTTAGTGTGACCTGTATTTTGCCTATCTTAGATATATAGTACATGCCCAAAATTATTTTCCCTAGATACTCAATTGCTGGTCTACTCATGATTGCTAGACATGTAACACAACACAGAGTAGTTGACATAGCTACCACTTGTAGACCTTTATTTAACCATAATATCCTAAACTGAGGTCATTGACAGGATAACCACAGGATCATACCACTTGCAAATTAATAACAATACAAATGCGTGATGAAGTTAAACATGCTAAAATACTGGGTTCACAAAGCTTGTGCTTACTATTATTTATTTGCAATGATATAGTTTGATAATTCAGCTTGACAATAAAAATTGCAGCTGTAAGCTGATCCCATCATGTGAAGTACTGGATAATCTATGTTCAACATTGCACATGTTAATTACTGCAGTTATTTCCTATGCGGTAACCAAGGAGGTTCTTTCTCTTTTTATAAAATAAAAGAATTCGTCGTTCTGCTTAATAATTGCAGCTGTGCGTTGATTGCATTATGTGAATCAAAGTAGTTCAACATGACATCATGAAGTTTTACTTCATGCGCTATAAGATTACTTTCAGGTAGATGAAGATTGATCAAGTGTACTTATGTACTTTCACTGCTTAGAAATCCACAATCCATCATTATTTTCTATTTAGAGTTAGAGCTTAAAATAGGATTTTTGTTTCTTTACTTAGATTTTGGTCAAATGCAGGATCTAGTGGAGCTTGAGTGCAAGGATTGGGCGAGAAAAGAAATTAACATAAAGTATGAAATCAGAGATAACAGGAAGGGATACAAAGCAGGAGCCTTGAAGAAGGGCATGGAACATATCTATACCCAACAGTGCGATTTTGTTGCCATTTTCGATGCAGATTTCCAACCTGAATCTGATTTCCTTCTAAAAACAATACCATTTCTTGTGCATAACCCAAAGATTGGTCTGGTTCAGACACGTTGGGAGTTTGGTAAGCAAGTATTTTCATTGTTTCATTCCAACCTTGTGAGGGTAGTCAAATTAAATAGGGGTGCTTCAGTTGTTGGTCTGATAGTCCGATTTATGTTTCTGTTGAATTGGTCACTCAACTGTTATATGTACTGTTTGTCTACTAAACTCTCAGATCATGTTCATCAAGTAGACTGAACTATGAAGAGCTTATAGCACTAAATGAAAATGAAAGGAAGTTTATTGGAAAAAAGGGCACATCCAATGTTGCACCGTTTTAAGTTATTAAAAGTAAATTTGGTTGGGTCCCAGAAAACCCATAATTTGGATATAGATGTTAACGCTCTGACACAATTTGTTCAAGTTTTCAATGGGTAATGTGGTGTCATTTGGTTATTTTAAGTGAGATTTTTTGTTCATTCTGATTACAGGCTGTTCTGCCCTGGCCTTTGCTGGGCAATTTTGCAGTGAACTATGATGTTTGCCTTATGACAAGGATACAAAAGATGTCACTGGACTATCATTTCAAAGTAGAGCAGGAATCAGGCTCATCTATGCACTCATTCTTTGGGTTCAACGGTAAGATCCAATATCAGAACTACTTACATGAACTTTTCATGCCTGGTCCTAACATCGCTGATCTGCCTACAGGTACTGCTGGTGTGTGGCGGGTATCAGCTATTAACGAAGCAGGAGGTTGGAAGGATCGCACAACTGTGGAAGACATGGACTTGGCTGTACGGGCAAGCCTCAAGGGATGGCAATTCCTGTATGTTGGTGATATAAGGGTATGTCTTTGTGAGGATTGTATATGTTGATCCTTTGATAAGCATATATGAATATTTTACCCTGTTTTAATAATGAATCTTGATCAGGTTAAGAGTGAACTCCCAAGTACCTTCAAAGCCTACCGACATCAGCAGCATAGATGGACTTGTGGTGCTGCCAACCTCTTCAGAAAAATGGCAACGGAAATTGCCAAAAACAAGGCAAGCCTTCTTCAATGACAGAATGGAACATGTTACGGGATTGTCATGCAATAATTTCTTTACCCGGTTATATGTGATTCAGGGCGTATCTGTATGGAAAAAACTTCATCTACTCTACAGCTTTTTCTTCGTAAGGAGGGTCGTCGCTCCCATCCTGACCTTCCTGTTCTACTGTGTTGTGATTCCGCTGTCTGTCATGGTCCCTGAAGTCAGCATTCCTGTCTGGGGGATGGTCTACATTCCCACTGCCATTACCATCATGAACGCCATCAGAAATCCTGGGTAAGAATGAATTCTTCCTGCAGAGAACGTCTCTCAATCTGCCCATCAATTTTCCAAGATTACAGATTTTATCTAATATATACCAGGTCCATCCATCTGATGCCTTTTTGGATTCTATTCGAGAATGTCATGGCCATGCACCGGATGCGTGCAGCTCTAACCGGCTTGCTCGAGACCATGAATGTCAATCAGTGGGTGGTTACTGAAAAGGTTGGTGATCATGTGAAGGACAAGCTTGAAGTCCCTCTTCTTGAACCATTGAAGCCAACAGACTGCGTCGAGAGGTAAAAAAAAAATTACTTACGATCATATACCAGTTACCCTCTGATATCAGAGCAGTGAAAAACTGAAAATCCATGCCTGAAATTACATGTCTGTCTGATTTTTCACCCTTGCAGGATTTACATTCCTGAGCTTATGGTCGCGTTCTACCTCCTGGTATGCGCGTCTTACGATTTGGTGCTCGGGGCCAAGCACTACTACCTGTACATCTACCTCCAGGCATTTGCTTTCATTGCTCTGGGATTCGGTTTCGCTGGGACATCTACCCCCTGTTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011946