BGIOSGA011948

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Revision as of 09:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011948| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011948, complete gene.| tag = OsI_101...")
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Gene Name

BGIOSGA011948

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011948, complete gene.

LocusTag

OsI_10190

Ensembl Transcript ID

BGIOSGA011948-TA

Ensembl Protein ID

BGIOSGA011948-PA

Length

3105

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4215173..4218277

Sequence Coding Region

4215173..4215230,4215619..4215795,4216135..4216304,4216639..4216737,4216821..4216919
,4217152..4217292,4217476..4217565,4217664..4217831,4217916..4217991
,4218153..4218277

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4215173..4218277 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4215173..4218277 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGTCTCCTCTTTGGCCTTCGCTAGAGTCCTCGTCCCGCCATCTCCAAGAACAGCATTAGCTTCCGCTTGCTCCCATTCTATCAAGATGTGCGCTTCTTCAGCCTCACCGTCGGAGTCAAAGAAGACCGTCTGGGTGTGGACAACAAATCGGCAGGTGATGACGGCAGCCGTGGAGAGGGGCTGGAGCACTTTCCTCTTTGGATCCAAAGATCTTGGCAAGGATTGGTCATCTACTGCTCGCATCAATCCTCTTTTTATCGATGGCCTGGAGATATTCGATGAGAAAAAACAAAAGATTGCTGTAATTTCTGAAGTCTCTTCCCCAGGAGAGCTGGAACTCATACAACCAGACAATGTGGAAGTGGAAAACATCGTGATAGACTTCCGAGGTGGATGGCAGGTTATACCAGCAGAAAATATAGTTGCTGCATTCCAGGGATGTAGAGGAACTGTATTGGCTGTTTCAACAAACTCAACTGAGGCTCAGGTTTTTCTTGAGTTGTTCCCCCAGTTACTTAGTTACTTTACAGGCCTTGGAGCAGGGCTTGATGGAGTTATACTTAAAGTAGAGGACATGGATGATATTATCAAACTCAAGGATTATTTTGACAGAAGGAACGAGGCAAAGAGCCAGTTAATGTTGACAAAGGCTACTGTGTCAAAGGTTGAAGTTGTTGGTATGGGTGATCGTGTTTGTGTGGATCTTTGCAGTATGATGCGACCTGGTGAAGGCCTTCTGGTTGGCTCCTATGCAAGAGGAATGTTTCTTGTTCACTCTGAATGCCTGGAGACAAATTATATTGCAAGCAGGCCTTTCAGGGTCAATGCGGGCCCTGTTCATGCATATGTTGCAGTCCCTGGTGGCCGAACTAGTTACCTCTCAGAGCTGCAATCAGGTCGGGAAGTAATAGTTGTTGATCAAAATGGTTTGTGGCGTACTGCGATTGTTGGTCGTGTTAAGATTGAATCAAGGCCTCTAATCCTTGTAGAAGCAAAGGAGAACGGTGGAGATGATACTTACAGCATTTTCCTGCAAAATGCCGAGACAGTTGCACTTATCACTCCTGAAAAAGGATCTAGTGGAAGAACTGCTATACCTGTGACTTCACTGAAAGTTGGTGATGAGGTTTTGGTGAGGAAACAGGGCGGTGCCCGTCACACTGGAATAGAGATTCAGGAGTTTATTGTTGAGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAVSSLAFARVLVPPSPRTALASACSHSIKMCASSASPSESKKTVWVWTTNRQVMTAAVERGWSTFLFGSKDLGKDWSSTARINPLFIDGLEIFDEKKQKIAVISEVSSPGELELIQPDNVEVENIVIDFRGGWQVIPAENIVAAFQGCRGTVLAVSTNSTEAQVFLELFPQLLSYFTGLGAGLDGVILKVEDMDDIIKLKDYFDRRNEAKSQLMLTKATVSKVEVVGMGDRVCVDLCSMMRPGEGLLVGSYARGMFLVHSECLETNYIASRPFRVNAGPVHAYVAVPGGRTSYLSELQSGREVIVVDQNGLWRTAIVGRVKIESRPLILVEAKENGGDDTYSIFLQNAETVALITPEKGSSGRTAIPVTSLKVGDEVLVRKQGGARHTGIEIQEFIVEK</aaseq>

Gene Sequence

<dnaseqindica>1..58#447..623#963..1132#1467..1565#1649..1747#1980..2120#2304..2393#2492..2659#2744..2819#2981..3105#ATGGCAGTCTCCTCTTTGGCCTTCGCTAGAGTCCTCGTCCCGCCATCTCCAAGAACAGGTAAACCATCCCAAATCTTCCCCATCTTTCTATCCCTTTGCACAAGATAGATTCTTGCTGCTGCTCATCTGTAGATGACTAGATTCCTCAATCCATCTTTCGGTCCTTGCTCCATTTCGGATTAAAAGTAGTCCTTGCGATACTATTTGCATTACAAAATCGAGATCCACGGATTTCAGTCTGGTCGAAATTTCCCAGCTTTTGTTGCTAGGGGAGTGTGGTGTCGGTACCTAACCCTAGCCCAAAACCCAAAACCCAAGAATTCATGATTGATTTCTTGAGATTTATTCGACAGACAATCAGTGAATATCCCCAACCTGCTGTGAAGTTTTTTTTTTTTTGTTTTTTTTTGCAATATTGACTCTGTAATGGGGATTCTTTGATGCAGCATTAGCTTCCGCTTGCTCCCATTCTATCAAGATGTGCGCTTCTTCAGCCTCACCGTCGGAGTCAAAGAAGACCGTCTGGGTGTGGACAACAAATCGGCAGGTGATGACGGCAGCCGTGGAGAGGGGCTGGAGCACTTTCCTCTTTGGATCCAAAGATCTTGGCAAGGATTGGTCATGTGAGAGCATTTCTTTTTTCTTACAGCGATGTTAGGTTACATAATTGTTTCTTTATTTTTGGTAGATAAGGCACAATTTAGCTATTTTGCTTACCTCTAAATACAAAACCAGCTCGGCTGGCTTAGATTTCAAAAAAAAAAAAAACAATTTAGCTATTTTAGAAGAAACGACAGACATTTCACTGATGATTTGCCATAAGAAGAAACAATTATGTCTAGGCATTGCTCTCCTTTAAACTAATGCAATATAATCATATACTTGATAGTATGCATCAGTGAGTGCATGCCATTTTCTTGGAATTCTGAAATCGACAGTTTTTTATCTCTTTGGCATTGCAGCTACTGCTCGCATCAATCCTCTTTTTATCGATGGCCTGGAGATATTCGATGAGAAAAAACAAAAGATTGCTGTAATTTCTGAAGTCTCTTCCCCAGGAGAGCTGGAACTCATACAACCAGACAATGTGGAAGTGGAAAACATCGTGATAGACTTCCGAGGTGGATGGCAGGTTAGATATTCGAATATTGGACTATCAGCAAATTACTTCCATGACATATGAATTAATTTCAATTGTCATAGTGAGATAAGTCATCATACTTGCATTTTTGTAATGCATTCTATGCTGTTTAGTCATCTTGAGTGTCTTTTTGTTTGTGTGAATAGCTTATTTGAATTCCATCAATGGTTTGAATGAGTGTCCAGTATACGTTTTTTCTGTGTTGTTAGGATCATTGGCTTGACATGCTGTACTGTTTCATATTTGAGCCGCAACTTGCAAAGTACACTTGACAAAACCCAACAAGCGTTAACAGGTGCCTCCTTTGTCCTCCTGAATTTTGTAGGTTATACCAGCAGAAAATATAGTTGCTGCATTCCAGGGATGTAGAGGAACTGTATTGGCTGTTTCAACAAACTCAACTGAGGCTCAGGTTTTTCTTGAGGTAACTGTCAAGATGTTTCAACATACATAGAAGTTCCTGTGTATAATGATGTATCGTGTTCCTCATCATTATCTTTTGTGAAGTTGTTCCCCCAGTTACTTAGTTACTTTACAGGCCTTGGAGCAGGGCTTGATGGAGTTATACTTAAAGTAGAGGACATGGATGATATTATCAAACTCAAGGTATGTTTATCACAACTCTTTGAAATTTCTTTGGTTTTAAATTATTAAAACACTGTGGGACTACAATGGTCTTGTGTACAGAGGCAAATACCGTGGTGTGTATATATACATATATATAGATATCTAAATCTAAGTGTGAAAGTACAGCTCCTGTTATTGTTACTGATTATCATTTGTCTGATTGTACGATTCACCAGATGTTTGTTTGTTCTCTCCTCCTTTAATCACTCAGGATTATTTTGACAGAAGGAACGAGGCAAAGAGCCAGTTAATGTTGACAAAGGCTACTGTGTCAAAGGTTGAAGTTGTTGGTATGGGTGATCGTGTTTGTGTGGATCTTTGCAGTATGATGCGACCTGGTGAAGGCCTTCTGGTTTGTGTATATTTCTCACTTGTTCACTGTAGATAAATAAATAATTAACATATATCCTGCAGTACAGAGTTGGTTAAAATCGTTCCACGTGAATGTGTCATTGTGCCCCCAAATAGAACCGCATTAGCATTTTACCTGTCCCAAGCTTCACCAGTCTGCCTCTACATGATGTTCTATTTTCAGGTTGGCTCCTATGCAAGAGGAATGTTTCTTGTTCACTCTGAATGCCTGGAGACAAATTATATTGCAAGCAGGCCTTTCAGGGTCAATGCGGTAAGATATCAACAACTTATGTTGCAGCAAGCTATTGCAGGTATCACTGTACAGCAAGAGAAACTAAGACTAATAAAATTTATGTGTTCTCCATTCAGGGCCCTGTTCATGCATATGTTGCAGTCCCTGGTGGCCGAACTAGTTACCTCTCAGAGCTGCAATCAGGTCGGGAAGTAATAGTTGTTGATCAAAATGGTTTGTGGCGTACTGCGATTGTTGGTCGTGTTAAGATTGAATCAAGGCCTCTAATCCTTGTAGAAGCAAAGGTACATAACTAACAATGATCTCCCTTCAAATGATTGCTGTACATTCATGGATTGTCAATTTCATGGCGTATGGGCTTGCTGCAGGAGAACGGTGGAGATGATACTTACAGCATTTTCCTGCAAAATGCCGAGACAGTTGCACTTATCACTCCTGAAAAAGGTAAGCCCATATGGACAACTTTTGAAGATAGGACTGTAAGTTTTGAGCTGCAACTATAATAAGCCATAAATTTCAGTTATGTTTGAATGATGCTAATCACCATGTGATTAGTACACATATTCAATCAACTCATTCTGGGACCATATGATTGTTTTATGTAGGATCTAGTGGAAGAACTGCTATACCTGTGACTTCACTGAAAGTTGGTGATGAGGTTTTGGTGAGGAAACAGGGCGGTGCCCGTCACACTGGAATAGAGATTCAGGAGTTTATTGTTGAGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011948