BGIOSGA011961

From RiceWiki
Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011961| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011961, complete gene.| tag = OS03G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011961

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011961, complete gene.

LocusTag

OS03G0174200

Ensembl Transcript ID

BGIOSGA011961-TA

Ensembl Protein ID

BGIOSGA011961-PA

Length

2036

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4384390..4386425

Sequence Coding Region

4384390..4384552,4384743..4384798,4384880..4384944,4385042..4385488,4385584..4385709
,4385810..4385993,4386270..4386425

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4384390..4386425 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4384390..4386425 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCGATGGAGCCCAAGGACATCGACTGGAGCAGGGTGGTGTCGCGGTACGTGCGCGACGAGACCTACGAGGGCATCGAGGCCCCGCACTGGGCCGACCTCACCGATCCCGAGGCCGGCGTCGCCGCCGTCGACGACGAGGCCTGGTTCTGCCGCCCCGATTGCCGGCATCCAAAGACGGTCGAGGACTTCCTCAAGATGAGCCCCAGCCCCAAGGGCAAGCTACTGCGATCAGTGTCGGCCATGATGATGCCGTTCGGCGAGAGGGACACCAACCTTAGAGACGGCAACAACAATCTCAAGAGGCGGGGAGCCGTCGCCGGCAGCGGCATCGCCGCCACCTTCACGCCGCCCAAGCCCAAGGCTGCGGCCAAGAAGAGGTTCCAGGACGACAGCGAGAACCAGGACCCGGCATTGGCCACTCCACCTCCGCCGCCACCGGCGGCGAGTAGGCCACCGTTCGGCGCGGCACGGTGGGCCAAGAACGCCAAGGACGCCATCAAGTCCAGCGCGGAGAAGCGGCCGGGCAATGCAGAGAAGGAGGCCCTGCTCAGCAAGAACGCCGCGCCGAGGAAGCTCAAGAGCACCCTCTCGGCGAGGAACCTCTTCTCCGGGAAGGACATACTTGACCAGATATCGGACTTCTACAATGAGCTCAAGCGGATGGCCGGCGGCAATGGCAGCCGGCCTGGGTCTGAGGCCATGGAGGAATTAAGCTCAAACCCAATAAATGAGGGCGATGTGGCCGAGAAGAAGGTCGATTGTGGCTGTGGCACTGGTGATCAGGTTCCCCCTGAAGAAGCCATCAAGGAGAAATCAAGGCAAGAAACAGCAGAAAAGAGTCCAAGCACAATGAAGGGGAAGAAGATGGGATTGAAAGTGGAAGCTGCGAAGCCCACCAGGTCCTCTGTGTTGAAGGAGGTGAAGGCCACACCACCGACTCCGCAGCGGTTCCCATCTCCCTCGACGAACCGTGTCAAGAACGTGAAAGCAGGAGGCATGTCGATGGCAAGCTCACCACTCAAGAAGCCACTGAAGGAGAAGGGGACACCTAGTAAGGATCTGGAGAACAGCAAAGATGCTAAGAGGCAACCTTTTGGTGTCAAGGACATGAACAACACCAAGGCTTGTGATGCAGAAGGCTCTAGTAGCATGTTTTGGTTCTTGAAGCCCTGCACCTTCCTAGTGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MESMEPKDIDWSRVVSRYVRDETYEGIEAPHWADLTDPEAGVAAVDDEAWFCRPDCRHPKTVEDFLKMSPSPKGKLLRSVSAMMMPFGERDTNLRDGNNNLKRRGAVAGSGIAATFTPPKPKAAAKKRFQDDSENQDPALATPPPPPPAASRPPFGAARWAKNAKDAIKSSAEKRPGNAEKEALLSKNAAPRKLKSTLSARNLFSGKDILDQISDFYNELKRMAGGNGSRPGSEAMEELSSNPINEGDVAEKKVDCGCGTGDQVPPEEAIKEKSRQETAEKSPSTMKGKKMGLKVEAAKPTRSSVLKEVKATPPTPQRFPSPSTNRVKNVKAGGMSMASSPLKKPLKEKGTPSKDLENSKDAKRQPFGVKDMNNTKACDAEGSSSMFWFLKPCTFLVE</aaseq>

Gene Sequence

<dnaseqindica>1..163#354..409#491..555#653..1099#1195..1320#1421..1604#1881..2036#ATGGAGTCGATGGAGCCCAAGGACATCGACTGGAGCAGGGTGGTGTCGCGGTACGTGCGCGACGAGACCTACGAGGGCATCGAGGCCCCGCACTGGGCCGACCTCACCGATCCCGAGGCCGGCGTCGCCGCCGTCGACGACGAGGCCTGGTTCTGCCGCCCCGGTACGCTCACCTCCCGGATTTTCAAGAATCGGTTCGGTTCTTGATCACCGAAGCCGTCTTCCCTTGGGGGATGGATGGATTCCGCTCTCGTTTTCGCTCGATTTGTTCTCTGATCTTGACACAAAAGAAAGAAGCTCTGCTTCTTGATGGCACACGCTCTTGATTTGATTTGCTACTGTTGTCGCTGCAGATTGCCGGCATCCAAAGACGGTCGAGGACTTCCTCAAGATGAGCCCCAGCCCCAAGGTATGTGCTGATTTCTCGCCTGTGTTTCTACTTCTCTGAACTTCGATTGGTTCGGTTTTCTCACTTTCTTCCTCGGATCAGGGCAAGCTACTGCGATCAGTGTCGGCCATGATGATGCCGTTCGGCGAGAGGGACACCAACCTTAGGTGAGCAGAGTTCTCCGGTTAAATTCAGCTGCTCGTCACTCACCTACTTCGATGCGACCATGTTCTGACCCCAATTTGTTTGATCCATTTTGCTCAGAGACGGCAACAACAATCTCAAGAGGCGGGGAGCCGTCGCCGGCAGCGGCATCGCCGCCACCTTCACGCCGCCCAAGCCCAAGGCTGCGGCCAAGAAGAGGTTCCAGGACGACAGCGAGAACCAGGACCCGGCATTGGCCACTCCACCTCCGCCGCCACCGGCGGCGAGTAGGCCACCGTTCGGCGCGGCACGGTGGGCCAAGAACGCCAAGGACGCCATCAAGTCCAGCGCGGAGAAGCGGCCGGGCAATGCAGAGAAGGAGGCCCTGCTCAGCAAGAACGCCGCGCCGAGGAAGCTCAAGAGCACCCTCTCGGCGAGGAACCTCTTCTCCGGGAAGGACATACTTGACCAGATATCGGACTTCTACAATGAGCTCAAGCGGATGGCCGGCGGCAATGGCAGCCGGCCTGGGTCTGAGGCCATGGAGGAATTAAGCTCAAACCCAATGTAATTAATTCTCTTCTCACTGAACCACTGAAGCGACGCAGGAATCTGGTTCTTGCATCCGTACTTTCAATTTCTTGACATACTGATCTCTGCAGAAATGAGGGCGATGTGGCCGAGAAGAAGGTCGATTGTGGCTGTGGCACTGGTGATCAGGTTCCCCCTGAAGAAGCCATCAAGGAGAAATCAAGGCAAGAAACAGCAGAAAAGAGTCCAAGCACAATGTAATTTCCTTGTCACTAGAATGCAAAACAACATTTCAGATCATCAGATGAATGCTTCCATGGTTGCTGGAGGTGCTGACAATTGGTTGGTTTTGTGCAGGAAGGGGAAGAAGATGGGATTGAAAGTGGAAGCTGCGAAGCCCACCAGGTCCTCTGTGTTGAAGGAGGTGAAGGCCACACCACCGACTCCGCAGCGGTTCCCATCTCCCTCGACGAACCGTGTCAAGAACGTGAAAGCAGGAGGCATGTCGATGGCAAGCTCACCACTCAAGAAGCCACTGAAGGTGACTACAGCATTCTTACTGTGCTAATTTAGTTGTTTTACTCTATTTATGTTGCTAAGTTGTTTCATTGTGGCCTTCCATATAGGTCTTCAGTTCAGGCATTTTTGTGTAATTACTTGACATCTGCATGCGACATTAATCACTGTCTTATCACTGTGGCAACTTGACATCTGCATGCTTCTAGTTTACTAATGCTGTGGTTCCCACTTGTATACTTCTCATTTCAAGTTGATTGTGCAGTGATCTAATTACTGTGAGAAATGCCTTTTTCTATAGGAGAAGGGGACACCTAGTAAGGATCTGGAGAACAGCAAAGATGCTAAGAGGCAACCTTTTGGTGTCAAGGACATGAACAACACCAAGGCTTGTGATGCAGAAGGCTCTAGTAGCATGTTTTGGTTCTTGAAGCCCTGCACCTTCCTAGTGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011961