BGIOSGA011962

From RiceWiki
Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011962| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011962, complete gene.| tag = OsI_102...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011962

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011962, complete gene.

LocusTag

OsI_10218

Ensembl Transcript ID

BGIOSGA011962-TA

Ensembl Protein ID

BGIOSGA011962-PA

Length

4048

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4388461..4392508

Sequence Coding Region

4388461..4388769,4388850..4388892,4389382..4389568,4389754..4389934,4390046..4390258
,4390341..4390427,4390574..4390708,4390781..4390894,4390992..4391239
,4391309..4391389,4391464..4391695,4391825..4391923,4391998..4392186
,4392413..4392508

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4388461..4392508 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4388461..4392508 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTTCGACGAAATGTCCATGGGCATTCCTGGGCGTGGCTGGCGCCCTGGTGATGCTCGTCGCCGCGGTCCATGTCTTCATGGTGCCAATCCTCCCTTCCTCGCTCGATTTCTTTGGTGCTGGTCACGGCATTGGCAAGCCAAGGAATGTGCTGCCAGGCGTTGGAGTGGTGGACTCACGTCTCAGTGGGCAGTTCCCTTCTGATTCGTATGGTGCAGTGACATACCGTGGTGCGCCGTGGAAAGCTGAGATTGGCAGATGGCTTGCTGGATGCGATGCCGGCTTGTCGGTTGTCAATATTACTGAATTTATAGGTACAAAGCGGTGCGAGCAAGACTGCAATGGGCAAGGAAAACGATGTGAGGAGGTTCAGAAGGTGGAATGCAACTTACCAAGTTCTCAAGAATGGCCTGTGGGACGGTGGATAGTTTCCATATGTCCAGCCCATTGTGATACAACAAGGGCAATGTGCTTTTGTGGACCAGGAACAAAATATCCAGATCGCCCTGTTGCTGAAGCTTGTGGCTTTAAAACAATAGTAAGCCAGGATGGTGCAACCGTGAATCCTGAGGATGCTTATTCTTCCAAGGTGAAGTTTAAAGAAGAATGTGATTGCAAATATGACGGACTCTGGGGGCGATTCTGTGAGACACGTGTTGAATGCAGCTGTATTAACCAGTGCTCAGGGCATGGACATTGCCGTGGTGGTTTCTGTCAGTGTGACGGTGGATATTTTGGAATTGATTGCAGCATGCCATCAAATTATTCAGTTGCATATGGCATGCCCTCATGGCTCCAACCACCAATGAATTTACCAGACTTGAAAAACATAAGCTCCAGCTCCATCAATGTTAAGGTTGTTGCTAAGAAAAAAAGACCACTTATTTATGTATATGATTTGCCAGCAGAATTTGACAGTCATCTTCTTGAAGGACGGCATTACAAGTTTCAGTGTGTGAACAGAATATATGATGACAAGAACAGAACCATATGGACCCAGCAACTGTATGGTGCTCAGATAGCACTCTATGAGAGCATCCTTGCTAGCCCTCATCGCACACTAAATGGTGATGAAGCTGATTATTTCTATGTGCCAGCTCTTGACTCGTGTCTAATAACTAGATCTGATGATGCCCCGCATCTGCAGATGCCGAGGGACTTGCGCCTCAGGAGCTACCATACTCTGGAGTACTACAGAATGACTTATGATCACATAGCTCAGCGGTATCCTTACTGGAACCGCACTTCTGGAAGAGATCATATCTGGTTCTTCTCATGGGATGAAGGTGCCTGCTATGCTCCTAAAGAGATCTGGAACAGCATGATGCTCGTCCACTGGGGAAACACTAACACAAAACATAAGAATTCAACGACAGCTTATTGGGCAGACAACTGGAATTATATTCCTATTGACAGAAGAGGCAACCATCCCTGTTTTGATCCAAGAAAGGATCTTGTGCTTCCAGCATGGAAGCAACCTAACCCAGCAGCCATCTGGTTAAAACTATGGGCGAGGACAAGGAACAACCGTACAACACTATTCTATTTCAATGGTAATCTAGGACCAGCCTATAAGGATGGCCGTCATGAAGACACCTATAGCATGGGGATTCGGCAAAAGCTGGCCGCTGAATTTGGTTCCACACCAGATAAGCAGGGGAAGCTTGGAAGGCAGCACACAGCCAATGTTACAGTTACCTATTTGCGAACTGAGAAGTACTATGAGGAACTAGCAAGCTCTATTTTCTGTGGTGTCTTGCCAGGGGATGGCTGGAGTGGGCGTATGGAGGATAGCATGCTTCAAGGATGCATTCCTGTAATAATTCAGGATGGAATTTTGCTTCCCTATGAGAATATGCTTAATTACAACAGTTTTGCAGTCCGCATACAAGAAGATGATATCCCAAACCTCATCAGAATACTTCGAGGGATAAACGAAACACAAGTAGAGTTCATGTTGAGAAATGTGCGCCAGATATGGCAGAGGTTCTTCTACCGTGACTCTATATTGCTAGAGGCTCAAAGGCAGAAAAGATTATTCTCTGAGGAGGCACCGTGGTCTGTTGAGGTGTCAAAACTAGACAAGGTTGATGATGTCTTCGCTACTTTCATACAGGTATTGCATTACAAATTATACAATGACCCTTGGCGGCAAGGTGTCCTCCAAAGAAAGGAAACCGGGTTGCCTGACATCTGCTCGAAAGCTTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MRSTKCPWAFLGVAGALVMLVAAVHVFMVPILPSSLDFFGAGHGIGKPRNVLPGVGVVDSRLSGQFPSDSYGAVTYRGAPWKAEIGRWLAGCDAGLSVVNITEFIGTKRCEQDCNGQGKRCEEVQKVECNLPSSQEWPVGRWIVSICPAHCDTTRAMCFCGPGTKYPDRPVAEACGFKTIVSQDGATVNPEDAYSSKVKFKEECDCKYDGLWGRFCETRVECSCINQCSGHGHCRGGFCQCDGGYFGIDCSMPSNYSVAYGMPSWLQPPMNLPDLKNISSSSINVKVVAKKKRPLIYVYDLPAEFDSHLLEGRHYKFQCVNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTLNGDEADYFYVPALDSCLITRSDDAPHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRGNHPCFDPRKDLVLPAWKQPNPAAIWLKLWARTRNNRTTLFYFNGNLGPAYKDGRHEDTYSMGIRQKLAAEFGSTPDKQGKLGRQHTANVTVTYLRTEKYYEELASSIFCGVLPGDGWSGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQEDDIPNLIRILRGINETQVEFMLRNVRQIWQRFFYRDSILLEAQRQKRLFSEEAPWSVEVSKLDKVDDVFATFIQVLHYKLYNDPWRQGVLQRKETGLPDICSKAS</aaseq>

Gene Sequence

<dnaseqindica>1..309#390..432#922..1108#1294..1474#1586..1798#1881..1967#2114..2248#2321..2434#2532..2779#2849..2929#3004..3235#3365..3463#3538..3726#3953..4048#ATGCGTTCGACGAAATGTCCATGGGCATTCCTGGGCGTGGCTGGCGCCCTGGTGATGCTCGTCGCCGCGGTCCATGTCTTCATGGTGCCAATCCTCCCTTCCTCGCTCGATTTCTTTGGTGCTGGTCACGGCATTGGCAAGCCAAGGAATGTGCTGCCAGGCGTTGGAGTGGTGGACTCACGTCTCAGTGGGCAGTTCCCTTCTGATTCGTATGGTGCAGTGACATACCGTGGTGCGCCGTGGAAAGCTGAGATTGGCAGATGGCTTGCTGGATGCGATGCCGGCTTGTCGGTTGTCAATATTACTGAAGTAAGCACTTATCTTTGTCACTGACCATTGCGCACTGCTTTAGCTTTCCTCGGATTAATTTGGCTGTTCTTCTGGAACAGTTTATAGGTACAAAGCGGTGCGAGCAAGACTGCAATGGGCAAGGTGTGTGCAACTATGAGCTGGGAGAATGCAGATGCTTTCATGGATATGCTGGTCAGTCCTACTTTGTCAGCTCAATTAATGTGTTAATCTTGTTAATAATTGATCAATGAAATTGCAATTTCACAAGGGATTTCGATCACTAGAAAGATTTAATGGTTAGAACATCAACTTGCAGTTTAACAAGGTTGGGTTTTAATCACATACCATTTTGATAAGATTGGCTTCTTGTTAGATCATTCCCTTGCCTATCTACTTATGTTAACTGCCATCGGTTATGGCATATTAGTTTCATTTTTACCAGTTTCTGTTTCTTCTCCTTTTCTTTTCCTGAAAAGAAAAAAGAATCATATGTACTGCATGCTATGCATGGTGGAGGCATCTGTACCATTCTTTGCTCTTTTTTTTTTTGTTATTTCTTAAGCTTCTCGTTGTAACAATTTAAATTGTATCACTGTGTTGCTAATCTCTACAAAAGGTTATCATATACAGGAAAACGATGTGAGGAGGTTCAGAAGGTGGAATGCAACTTACCAAGTTCTCAAGAATGGCCTGTGGGACGGTGGATAGTTTCCATATGTCCAGCCCATTGTGATACAACAAGGGCAATGTGCTTTTGTGGACCAGGAACAAAATATCCAGATCGCCCTGTTGCTGAAGCTTGTGGCTTTAAAACAATGTAAGGAAGAATATCATTGATGCTTATGTCTTTTCGATAAAACAACATAAGAATATTATTTATACTTCAGTAATCAGTATCATTGAACTTCTCTAGCTCATATTTTTAGCTTGCCTAAAAAACCTGATGACCCGAAGCTCACTGACTGGAAAACACCTGATCCGGATGTATTCATGACAAACAAGAGTAAGCCAGGATGGTGCAACCGTGAATCCTGAGGATGCTTATTCTTCCAAGGTGAAGTTTAAAGAAGAATGTGATTGCAAATATGACGGACTCTGGGGGCGATTCTGTGAGACACGTGTTGAATGCAGCTGTATTAACCAGTGCTCAGGGCATGGACATTGCCGTGGTGGTTTCTGTCAGGTATCTCTCAAACAAGTTGATCGGATAAAAGTCATGAAAATGTGTTGACAGACTGATTTGTGTTTGCTACCTTCTTAAGCTATAATCTAATTGAGTATAAATTTCTTTCAGTGTGACGGTGGATATTTTGGAATTGATTGCAGCATGCCATCAAATTATTCAGTTGCATATGGCATGCCCTCATGGCTCCAACCACCAATGAATTTACCAGACTTGAAAAACATAAGCTCCAGCTCCATCAATGTTAAGGTTGTTGCTAAGAAAAAAAGACCACTTATTTATGTATATGATTTGCCAGCAGAATTTGACAGTCATCTTCTTGAAGTAAGTACATATAGTAAGCTTAATTCATTAAATTCTTAAAGCTTTACTGCTGATTGAGATAAAAAGACGTGTTCTATTGTAGGGACGGCATTACAAGTTTCAGTGTGTGAACAGAATATATGATGACAAGAACAGAACCATATGGACCCAGCAACTGTATGGTGCTCAGGTTTGTTAAGCTAATTACTATCAGAGTGGCACTTATGATATATGTTCGTTGTTCCGTGTTGATAGTAAACATAAATCTTGCTCAGTAGGGCACATTCGGATCTAGATCTGACCAATGTATGATGCAATTTTTTCTTTTCCATGTAGATAGCACTCTATGAGAGCATCCTTGCTAGCCCTCATCGCACACTAAATGGTGATGAAGCTGATTATTTCTATGTGCCAGCTCTTGACTCGTGTCTAATAACTAGATCTGATGATGCCCCGCATCTGCAGATGCCGGTAACATCGATCATCCATTTGTTGTCTCGAATTGTTTTTGTTCTCCTTCAATAATTTGATTCTTGATTTTAGAGGGACTTGCGCCTCAGGAGCTACCATACTCTGGAGTACTACAGAATGACTTATGATCACATAGCTCAGCGGTATCCTTACTGGAACCGCACTTCTGGAAGAGATCATATCTGGGTGGGTATTGTGTTTATATGTAATTAATATTATGATGATTCTTGAATCATTATTGCATAGTCACTAATTGATAGTTTTTCAACATACGAACGAGCAGTTCTTCTCATGGGATGAAGGTGCCTGCTATGCTCCTAAAGAGATCTGGAACAGCATGATGCTCGTCCACTGGGGAAACACTAACACAAAACATAAGAATTCAACGACAGCTTATTGGGCAGACAACTGGAATTATATTCCTATTGACAGAAGAGGCAACCATCCCTGTTTTGATCCAAGAAAGGATCTTGTGCTTCCAGCATGGAAGCAACCTAACCCAGCAGCCATCTGGTTAAAACTATGGGCGAGGTGTGTTTGAGTACTTTTGAATATTTTTGAACCAATATCATTTAGAGCATTAAAATATATTTTTCGCAGGACAAGGAACAACCGTACAACACTATTCTATTTCAATGGTAATCTAGGACCAGCCTATAAGGATGGCCGTCATGAAGACACGTATGCATCTCTTCATATGTTTGTACAAAAATATGTGGCCAACTTGTATCTAAATCTTCTACTGCATAATGCAGCTATAGCATGGGGATTCGGCAAAAGCTGGCCGCTGAATTTGGTTCCACACCAGATAAGCAGGGGAAGCTTGGAAGGCAGCACACAGCCAATGTTACAGTTACCTATTTGCGAACTGAGAAGTACTATGAGGAACTAGCAAGCTCTATTTTCTGTGGTGTCTTGCCAGGGGATGGCTGGAGTGGGCGTATGGAGGATAGCATGCTTCAAGGATGCATTCCTGTAATAATTCAGGTGCCACAATATCATTTTCTCCATTTCTATTATTGTGGATCAAGGGAGGTTATAATGTGCAATTGTGCATCTCTGAGAATCATTTGACCTACTACTCATAATTATCTTCTATGTTGGCTTAAATTGTAGGATGGAATTTTGCTTCCCTATGAGAATATGCTTAATTACAACAGTTTTGCAGTCCGCATACAAGAAGATGATATCCCAAACCTCATCAGAATACTTCGAGTATGTGTTTGCATTAACTCCCCTTTCGTTCGGTTATAACTTTTGACACATACTTGGTGTTTCCATCTCACCAGGGGATAAACGAAACACAAGTAGAGTTCATGTTGAGAAATGTGCGCCAGATATGGCAGAGGTTCTTCTACCGTGACTCTATATTGCTAGAGGCTCAAAGGCAGAAAAGATTATTCTCTGAGGAGGCACCGTGGTCTGTTGAGGTGTCAAAACTAGACAAGGTTGATGATGTCTTCGCTACTTTCATACAGGTAATTACTGGAAAAGCTTGCCAGATTGATCTGTATTTAGGGACTTAACATAGTTTGCTCTGACCATACTTACATAGTTACATTTGCCATAGCAAAGCTTTAACAGACCCATACTTACTATACCACAAAAGAATAAATGCTTGCTCATGTCTCTCGCCTTTTACCTTCACCTTAGAATTGTGGTTCTGTTGACATTTCCTATTTGCTGAGTACGATGTTTTTGCAGGTATTGCATTACAAATTATACAATGACCCTTGGCGGCAAGGTGTCCTCCAAAGAAAGGAAACCGGGTTGCCTGACATCTGCTCGAAAGCTTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011962

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA011962&oldid=56785"