BGIOSGA011970

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Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011970| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011970, complete gene.| tag = OsI_102...")
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Gene Name

BGIOSGA011970

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011970, complete gene.

LocusTag

OsI_10236

Ensembl Transcript ID

BGIOSGA011970-TA

Ensembl Protein ID

BGIOSGA011970-PA

Length

3031

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4496001..4499031

Sequence Coding Region

4496001..4496336,4497188..4497258,4497370..4497412,4497696..4497815,4497880..4498044
,4498137..4498258,4498452..4498571,4498740..4499031

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4496001..4499031 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4496001..4499031 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGCGCGACAGGGAGACGGCCGTGGCGCTGGCCCGCCTCGCCGCCGCGCTGGACGGGGCGGTGCTCGGCCTCGGCACGGCGGCGCTCGCCGTCGCCTCGTGGGTCAAGTACCTCGCCGCGTCCGGGCAGCTGCAGCGCATCGCCTCCGCGCCGGCGGCCGCCATACCCGACCTCCGCTCGCTCCTCGCGGAGTACGGCGGCGGCGGCGGCGACGGCGACCAGCCGATCCTCGCGGCGGTGCGGGGCCACGTCCGCGCCGCCCCCCGAGGCAAGTACCTCGTCCCCCCAGGCTCCGGCGAGCACTGCGTCGTCGCAAAGCATACCCAGCTGTGGCATAGAAGACTTGGGTTAATGTTCTGGATTGCTTCTGGATTTCTGTGGAAACAGTATCCTGAAGCAAACTGCCGGGGCTGCGGCTGCACTGCAGCCAACCGGAACATTCCGTGCTTGTTCAATGAATGGAGAGGCATCTTTGGGTGGACCTTTGATCTGCATGCTCTCTTTTTCAAATCAATTAAGGAGCAGATTATAACATCATTTAGATGGGTATACCATCTGTACTTTGTTCCATTTGTTCTTGTAGATCCTGAAAACATGACTGGAATGGTCCATGTGAAGTTAGACAGGGCAATGCAACCATTACCTCTTACAACTGTGTATCATAAACTTACCCCAGTCGACTCAACTCCTTACACATTGTTTCAGACTATTATTGGCAATGGTTACCCAATTGCGTTGTTGGATGAGGAAAAGATACTTCCTGTTGGAAAGGAGATTACAGCAATAGGCTATATTCGACCTCATAAAGCAAGTGTTGAGATCAGCTCATGCTCAGAAATACCTTTTTTCTTGTCTGACCTTACCAAGGATGAGATGGAAGCCGAGTTGTCTTCTCGTGCTAAAACACTCTTTTGGGCTAGTGTTGTTCTTGGAACAATGTCAGTTTGCTTGCTGGGCTTTGCGACTTACAGGAGCTGGAAGAAGATCAAAGAGCGGAGGGAGGCAAGGCAAGCCCAAGAGGTATTTCGACAAACTACTGATGAAGTTACAGACGATCAGTCTAGCGATGAAGAGGCTGGTGAAATGGGAGACGGGCAACTATGTGTTATATGCTTAAGGAAAAGAAGGAAGGCAGCTTTTATTCCTTGTGGTCACCTTGTCTGCTGCTGCAAATGTGCACTGATTGTGGAACGTCAGTTCGACCCATTGTGCCCTATGTGTCGGCAAGACATCCGATACATGATAAGGATCTACGACAATTGA</cdnaseq>

Protein Sequence

<aaseq>MSARDRETAVALARLAAALDGAVLGLGTAALAVASWVKYLAASGQLQRIASAPAAAIPDLRSLLAEYGGGGGDGDQPILAAVRGHVRAAPRGKYLVPPGSGEHCVVAKHTQLWHRRLGLMFWIASGFLWKQYPEANCRGCGCTAANRNIPCLFNEWRGIFGWTFDLHALFFKSIKEQIITSFRWVYHLYFVPFVLVDPENMTGMVHVKLDRAMQPLPLTTVYHKLTPVDSTPYTLFQTIIGNGYPIALLDEEKILPVGKEITAIGYIRPHKASVEISSCSEIPFFLSDLTKDEMEAELSSRAKTLFWASVVLGTMSVCLLGFATYRSWKKIKERREARQAQEVFRQTTDEVTDDQSSDEEAGEMGDGQLCVICLRKRRKAAFIPCGHLVCCCKCALIVERQFDPLCPMCRQDIRYMIRIYDN</aaseq>

Gene Sequence

<dnaseqindica>1..336#1188..1258#1370..1412#1696..1815#1880..2044#2137..2258#2452..2571#2740..3031#ATGTCGGCGCGCGACAGGGAGACGGCCGTGGCGCTGGCCCGCCTCGCCGCCGCGCTGGACGGGGCGGTGCTCGGCCTCGGCACGGCGGCGCTCGCCGTCGCCTCGTGGGTCAAGTACCTCGCCGCGTCCGGGCAGCTGCAGCGCATCGCCTCCGCGCCGGCGGCCGCCATACCCGACCTCCGCTCGCTCCTCGCGGAGTACGGCGGCGGCGGCGGCGACGGCGACCAGCCGATCCTCGCGGCGGTGCGGGGCCACGTCCGCGCCGCCCCCCGAGGCAAGTACCTCGTCCCCCCAGGCTCCGGCGAGCACTGCGTCGTCGCAAAGCATACCCAGCTGGTGAGTCGCTCGCTGAGAAGTATCTTGCGCCCGGCGCTTAGAGCTAGGGTTTACGCTTAGGTGGTACGGATGCTTAGCAAGGGTGTGGTTTCCAAATCCAATCATAAATTCTCAAGGGTTCTGTGCGTGCTTAATGACTGTTCTCGTGATGATGAGATTATATGGGAACGCTGAAGATTCCGATTAAACTGTAGAGATAAGCATGTTTAGGCATTGGAGTACGAAGTAGTCGTGGAGCTTTTGTTTGGTTTCATGTGCTGTATTGCAAATCTAGATAGAGGCCTTAAATTGTAGAAATCTTTGAGAATTTCAGTGCATAAGGCTATAATGTCTGTTTGTTTTCATTACTCTCTGTGTGTAGCTTCTAGGAGTAGTCGAGTAGGAAGGTACGTGGTTGGTATTCCCTTGTGCATAATAATTAGATAGTTTGGGGAAAGGGTAGATGCTTGTGGTTTCCTTGTCAGGCTATTCTTGTGCTCAATTCTGAGGTTTGACAACTAATTCGGAAAGTTTGGCAATATTGATTATTAATATGCAAAATAGCATTTGGCTTCTGTTGCATTGGGAATCAGATGGTTAGTACCGTATATGAGTTATCTGGTTGCAAGATGCCTACTAGCTGCAAAATCAATCTCCTGTAACCCTGTTATGCTTCCATGGATTTGGGTCTTAGGAGAGTGTTGTTGTTAAAGCCCGGAAGTAATGGTAAAATGCAGCAGTTTTGACTTTTGATGTTATCAGTTGATTCAAATTCTAGTGTGATGTTGTAATCATAGTAGATGGTTTTAGAATGAAAAAGGACTAGGAATAAATTGAAGAAAAGTTTATGATTTTGTTTTTTGTTGCTACAGTGGCATAGAAGACTTGGGTTAATGTTCTGGATTGCTTCTGGATTTCTGTGGAAACAGTATCCTGAAGCAAAGTTCCAGTTATTGATTTTGTTGTAAACTTCAGAAAAAGCAAAGGTTTATATGCCGTGGTAATGTGGCGCAAACTGCTAAGCTACTTCTGAACACATTATGGGTATGTTCAGCTGCCGGGGCTGCGGCTGCACTGCAGCCAACCGGAACATTCCGGTAAGCACAAACACAGCAGCAGCCGCAGCTGCAGTCCTGGCCTGCCAAGTTAAGGATCCTCATGGATTAAAATATACATTGACTTGCAATTAATTTGCCATTTCCCTTCTTTTGTTACCAAAGTAGTATATATGAGTACAAATATACAATGGCATTTACTTTATCGCTATACGCCTAAACTTTGCCTTTATTTTTTCCTTTCTGCTTTTACAGCTGTTTACCTGTTATTCTTTCCCTGTATGGATTTCTCTAACTAGTGCTATGTGATGATGTACTTATGCAGTGCTTGTTCAATGAATGGAGAGGCATCTTTGGGTGGACCTTTGATCTGCATGCTCTCTTTTTCAAATCAATTAAGGAGCAGATTATAACATCATTTAGATGGGTATACCATCTGTACTTTGTAAGCTGGTTATTGTTTGAATAATCTTGGCCTCAAATGTTAACCATACCTTTCCTTTTGCAAGGTTCCATTTGTTCTTGTAGATCCTGAAAACATGACTGGAATGGTCCATGTGAAGTTAGACAGGGCAATGCAACCATTACCTCTTACAACTGTGTATCATAAACTTACCCCAGTCGACTCAACTCCTTACACATTGTTTCAGACTATTATTGGCAATGGTTACCCAGTAAGTTCCTGGCTGTATATTGGACCTTTTTTTTGTATGGAATATCAGCACAGGGATATATATCTTGAGCTATGCAATTGTTCCTTCCATAGATTGCGTTGTTGGATGAGGAAAAGATACTTCCTGTTGGAAAGGAGATTACAGCAATAGGCTATATTCGACCTCATAAAGCAAGTGTTGAGATCAGCTCATGCTCAGAAATACCTTTTTTCTTGTAAGGGTTCTTTTGTTTGGCATGTGTTTTCATATCTTATCTTTCTTTTACTGATACTCCAGGATTCCCAGAACATTGGTAGTTTATAATTTATATGGCTAAGATATCTCTTGTGGTTAACCGAAGTAGGACATGCATATGAAGATATTCTTTTGGTTGAGTTTTATTGCTTTTTTTAACTCTTTACCTTCAGGTCTGACCTTACCAAGGATGAGATGGAAGCCGAGTTGTCTTCTCGTGCTAAAACACTCTTTTGGGCTAGTGTTGTTCTTGGAACAATGTCAGTTTGCTTGCTGGGCTTTGCGACTTACAGGTATCAAACTGTGACATTTTTGCAATTGTTAATGATTTTATTGGTTAGTATTCAATTAGTGTTTAGTTCTGAGGATAATCTACAGCTTGATACTTCAATCTTACTCTCTTTGTTAGTTATTTCGTACATCTTGTGAGTTCCAGATGACTTGATGTTGTACTGATGCAGGAGCTGGAAGAAGATCAAAGAGCGGAGGGAGGCAAGGCAAGCCCAAGAGGTATTTCGACAAACTACTGATGAAGTTACAGACGATCAGTCTAGCGATGAAGAGGCTGGTGAAATGGGAGACGGGCAACTATGTGTTATATGCTTAAGGAAAAGAAGGAAGGCAGCTTTTATTCCTTGTGGTCACCTTGTCTGCTGCTGCAAATGTGCACTGATTGTGGAACGTCAGTTCGACCCATTGTGCCCTATGTGTCGGCAAGACATCCGATACATGATAAGGATCTACGACAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011970