BGIOSGA011976

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Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011976| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011976, complete gene.| tag = OsI_102...")
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Gene Name

BGIOSGA011976

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011976, complete gene.

LocusTag

OsI_10249

Ensembl Transcript ID

BGIOSGA011976-TA

Ensembl Protein ID

BGIOSGA011976-PA

Length

6392

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4556646..4563037

Sequence Coding Region

4556646..4556939,4557530..4557661,4558142..4558266,4558806..4559007,4559189..4559314
,4559421..4559677,4559985..4560092,4560159..4560312,4560395..4560560
,4560984..4561141,4561273..4561596,4561700..4561774,4562109..4562178
,4562244..4562401,4562888..4563037

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4556646..4563037 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4556646..4563037 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCCGGCCGCCGCCTCACCGGATGATCGCATCCGGAGCTACGAGGATTTCGCGAGGGTGCACGCGTACCTGCTGGCCGCCTCCGGGATCCCGCCGTCGCTGCACCAGCGGCTTTACCGCAAGCTCGCCGACGAGGTGTTCGACGGCGGGGAGGCCTTCTCGGTAGAGCCCTGCGAGGGAGGGAGGCAGCGGAGGCTCGTTCTCGCCGCTGAGTGGACTCTAGGGAGGGAGTCCGATGTCTTCCTCGTCGACCACGCCTGGTCCTTCCGCCTCTCCGATGCGCTTAAGCAGTTGAGGGAAGTACCAGGACTGGCTGAAAGAATGGCAGCATTGATGTGTGTGGATCTGGACGAGAGAACTGAACTTGAAGAAGCAGATGAACAGGACAATGGGAATGGAGGGAGTTTGGAGAGTGCCTTGGAGAATATGGTAGCCCTCAACCTATGGGGAAACAAGCTTCAGGATCCAGAGAAAATAATGAAAGGAATAGGGGAATGTAGAAGGCTAAAGGCACTTTGGTTGAATGAGAACCCTGCACTGAAGGAAGGTGTTGACAAAGTTATTCTTGACGGTCTACCTGAATTGGAAATATACAATTCACATTTTACGAGGAAAGCTGGAGAATGGGCTTTAGGTTTCTGTGGGGATATTATTGGAGCAGACAATCCCTGTTCCTCAGCGGAAAGCATACCATTGGAGAATATTGCGTCTCTCGATCTCTCAGATAGGTGTATCCACAAACTACCAGTGGTGTTCTCTCCTAGAAAACTTTCCTCCCTGTTGAGCTTGAACATCCGTGGTAATCCTTTGGATCAAATGTCCAGTGACGATCTCTTGAAGTTAATTAGTGGATTTACCCAGTTACAAGAGTTGGAGGTTGATATTCCTGGCTCTCTTGGAAACAGTGCTATTTCCATTCTTGAGTGTCTTCCTAATCTATCTTTGCTAAATGGTATCAATGTGGCAAGTATAATAGAGAGTGGTAAGCATATAATTGATTCTGCACTTAAACCACGTCTGCCTGAATGGTCACCACAAGAATCCCTTCCTGAAAGAGTTATTGGTGCAATGTGGTTATATCTTATGACATACCGGCTTGCTGATGAAGAAAAGATCGATGAAACACCTGTTTGGTATGTCATGGATGAGCTGGGTTCAGCTATGCGCCACAGTGACGATGCAAACTTCAGAATAGCACCTTTCCTGTTCATGCCCGATGGTAAACTAGCTTCTGCCATAAGTTACACAATTTTGTGGCCTGTTCATGATGTTCATACTGGAGAAGAGTGCACTCGTGATTTCTTGTTTGGTGTTGGCGAGGACAAACAACGCTCGGCTAGGCTTACAGCCTGGTTCCACACACCAGAGAATTATTTTATCCAGGCAAGAAACTTAGAATTCAGAAAGTACAAGGAACAACTTCAATCAAGCAGTATCTGTCCTTCAAGAAAAGTAACACCGGTGACCAAAAGTATCCGTCCAAGTGATGGCCATGCACTTCGAGTATTTACCGACATACCCCAAGTAGAGGAGTTTCTAACACGTCCAGAATTTGTTCTCACATCTGATCCAAAGGAAGCTGACATCATTTGGGTAAGCATGCAAGTGGATTCGGAATTAAAGAATGCACTAGGACTTACAGACCAACAATATACAAATCAATTTCCTTTCGAAGCTTGCCTGGTCATGAAACATCACTTGGCAGAGACTATCCACAAGGCATGGGGTTCACCTGAATGGCTTCAACCTACGTATAACCCGGAGACACATTTATCTCCACTCATTGGAGATTACTGTGTGAGAAAGAGAGATGGTATGGATAACTTATGGATTATGAAGCCTTGGAATATGGCAAGAACAATTGACACTACTGTTACTGGTGATTTATCTGCTATCATTAGACTCATGGAGACAGGTCCCAAAATATGCCAAAAATATATCGAATGCCCTGCACTTTTCCAAGGAAGGAAGTTTGATCTGCGGTATATTGTTTTCGTCCGCAGTATATGCCCTTTAGAGATATTTCTTTCTGATGTGTTTTGGGTTAGGTTAGCAAACAATCAGTACACTCTGGAGAAAACAAGCTTTTTTGAATATGAAACCCATTTCACCGTGATGAATTATATTGGAAGGATGAACCATATGAACACACCAGAGTTTGTCAAGGAGTTTGAGAAGGAGCACCAAGTTAAATGGCTGGAGATCCATGGACGCATACGGGATATGATACGATGTGTCTTTGAGTCAGCCACAGCTGTTCATCCTGAGATGCAGAACCCGTTCTCTAGGGCTATCTATGGGGTTGATGTCATGCTTGATAATAAATTCAATCCGAAGATTTTGGAGGTGACATATTGTCCGGACTGCACGAGGGCATGCAAATATGACACTCAAGCTCTCGTGGGAAGCCAGGGTGTCATCAGGGGCACTGAATTTTTCAATACAGTGTTTGGCTGCCTCTTTCTGGACGAGCTTAAAGATGTATCGCCGCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MSPAAASPDDRIRSYEDFARVHAYLLAASGIPPSLHQRLYRKLADEVFDGGEAFSVEPCEGGRQRRLVLAAEWTLGRESDVFLVDHAWSFRLSDALKQLREVPGLAERMAALMCVDLDERTELEEADEQDNGNGGSLESALENMVALNLWGNKLQDPEKIMKGIGECRRLKALWLNENPALKEGVDKVILDGLPELEIYNSHFTRKAGEWALGFCGDIIGADNPCSSAESIPLENIASLDLSDRCIHKLPVVFSPRKLSSLLSLNIRGNPLDQMSSDDLLKLISGFTQLQELEVDIPGSLGNSAISILECLPNLSLLNGINVASIIESGKHIIDSALKPRLPEWSPQESLPERVIGAMWLYLMTYRLADEEKIDETPVWYVMDELGSAMRHSDDANFRIAPFLFMPDGKLASAISYTILWPVHDVHTGEECTRDFLFGVGEDKQRSARLTAWFHTPENYFIQARNLEFRKYKEQLQSSSICPSRKVTPVTKSIRPSDGHALRVFTDIPQVEEFLTRPEFVLTSDPKEADIIWVSMQVDSELKNALGLTDQQYTNQFPFEACLVMKHHLAETIHKAWGSPEWLQPTYNPETHLSPLIGDYCVRKRDGMDNLWIMKPWNMARTIDTTVTGDLSAIIRLMETGPKICQKYIECPALFQGRKFDLRYIVFVRSICPLEIFLSDVFWVRLANNQYTLEKTSFFEYETHFTVMNYIGRMNHMNTPEFVKEFEKEHQVKWLEIHGRIRDMIRCVFESATAVHPEMQNPFSRAIYGVDVMLDNKFNPKILEVTYCPDCTRACKYDTQALVGSQGVIRGTEFFNTVFGCLFLDELKDVSPL</aaseq>

Gene Sequence

<dnaseqindica>1..294#885..1016#1497..1621#2161..2362#2544..2669#2776..3032#3340..3447#3514..3667#3750..3915#4339..4496#4628..4951#5055..5129#5464..5533#5599..5756#6243..6392#ATGTCGCCGGCCGCCGCCTCACCGGATGATCGCATCCGGAGCTACGAGGATTTCGCGAGGGTGCACGCGTACCTGCTGGCCGCCTCCGGGATCCCGCCGTCGCTGCACCAGCGGCTTTACCGCAAGCTCGCCGACGAGGTGTTCGACGGCGGGGAGGCCTTCTCGGTAGAGCCCTGCGAGGGAGGGAGGCAGCGGAGGCTCGTTCTCGCCGCTGAGTGGACTCTAGGGAGGGAGTCCGATGTCTTCCTCGTCGACCACGCCTGGTCCTTCCGCCTCTCCGATGCGCTTAAGCAGGTACTAATACTATCCCTGGGACCGTGGTTTACTTCTGTGGAATCAGTTGCGCTAGTTTGTTGGGAAGTGATTAGTGCGATTTTGGCGGCTTTTGTGCTGCCTAGCTGTATTATGGCCCATAACGTAGTGTATTACTGATGAATGGGAGCGCAATGACGACATTATAACGGACTTGTTGATTTAATTTGTTTACTCTTGTGACTTCAAGTAGGGTTTATGCTGTACTATTATGCCATTTACTTTTATGTTGGATACATGGAACGATTTTAGCATGGTCCTTGCTGATTGTTAATGTGTTATTACTGTGAATTGGAGTATTGACTAGTTAAGTGAGCGCAGCTACAGTTCGAACTAACTTAAGAGTGTCATAGTTTTTTTTTTTGGGTGCTGTTAACGTCTTGTACTTATTAGCTTTCTTATGCTGGTTAATAAGTGGTCGACACTGCAAAATCAGGGTCCGTTTTATTCTTTTCATGCTATCATCTGATAGCTATGTCGACTGACCAACAAATACACATTTTGTGAGTGTTCATTTACAGAGCTTTTTACTTCCATGAGTGCTCTTATGCTCTTATTTTGGTGATATGCAGTTGAGGGAAGTACCAGGACTGGCTGAAAGAATGGCAGCATTGATGTGTGTGGATCTGGACGAGAGAACTGAACTTGAAGAAGCAGATGAACAGGACAATGGGAATGGAGGGAGTTTGGAGAGTGCCTTGGAGGTAGTTGAGAAAGAAAGGACTAGAATCCACGGAGAAGGGAAGTGACTTTGCAGCATGGCTGGAACTTGAGGAGCTTGGAATTGATGATGACATGCTAATAGCTTTGGATCTATCTTCAAAATTTCCGGTCCGTTCCCTTTATATATTATTTATTCATGTTTTTACTTTTTAGTTGCCGTTGTCTGCAACATACACCAAAAAGTTGTTTATCTGCCTTATCTGATAAAAAAAAAACCCTGCTGTGCATATCTTTGTAGATGATCCAATCCAATAATTATGGTTTGAATTATTCTTCAGGAAAAGAAACTTTCCAGTGTTAAAGATCGTTTCAGTAAAAAAAAAAGTACTAATGTTTAGTACTGGTCTTGCTCCCCAAAAACATTATGACTTTGAGATGTGTATTTTTACCATAATTTCATGTTTCTTTGAATTTTGTGTATGTTCTGAAGTTTTCCTTTTATTTTCTTTGTATGCCATTAGAATATGGTAGCCCTCAACCTATGGGGAAACAAGCTTCAGGATCCAGAGAAAATAATGAAAGGAATAGGGGAATGTAGAAGGCTAAAGGCACTTTGGTTGAATGAGAACCCTGCACTGAAGGAAGGGTCAGAATCAAGCCTTATTTGTTTTTGTTGAAGTTTTAATTTTGTTAATTCTGTTGTGAATATTTTTCATTTCAAGTTTTTCACTGTTATAGCCTGATAAGTCCAAGTAGGAAAATAACTCTGGGGGTCCTGATGGAAGTTGACCAGCAACTAGTTATTGTGGAATCATGTAGTTATCTCAACATGATTGATAGGAGAAAATTGTAACTTCTGTGCTTGAACAGAAAGCAAGTGAACAACATCTTAAGATAATTGAGATATTATTTTGCTTAGTTATAGTATATGTCCTCTTTAATTTGAAGAATAAAACCATCTTAGGATGAGTTGGTTCATCATGAGGTCTTCCCATGGTTTTAGTGGGATGACTTCCTTCTTCATCATAGTAATAAACATGTACTAACAAACATAAACTTATAAAAAAAATGCTGAGGTGATAAATGGATCCTCAAACCAAACAAGTGACCAGTTTTGGTTGGGCCATTCGCCATCTCTTCTTTTGTCATGTGGCATTCTGATGTTTTTTTCCTTAATGTTGATAGTGTTGACAAAGTTATTCTTGACGGTCTACCTGAATTGGAAATATACAATTCACATTTTACGAGGAAAGCTGGAGAATGGGCTTTAGGTTTCTGTGGGGATATTATTGGAGCAGACAATCCCTGTTCCTCAGCGGAAAGCATACCATTGGAGAATATTGCGTCTCTCGATCTCTCAGATAGGTGTATCCACAAACTACCAGTGGTAATAGCTATAACTGGTCTTCTTTATTGACATTATTCACTAATTCATTTTCTTGATCAAAATTATTCACTAATCCATTTGGCACATTTTGACTTTAAGATGTTATTTTCCAAACTGTACAATCTTGAAATGTGGAACTCTTTTGCTGATAATTCCCTTCTCTGCATATACAATTCAACAGGTGTTCTCTCCTAGAAAACTTTCCTCCCTGTTGAGCTTGAACATCCGTGGTAATCCTTTGGATCAAATGTCCAGTGACGATCTCTTGAAGTTAATTAGTGGATTTACCCAGTTACAAGAGTTGGAGGTATTACCAGCCTAACTGCATGTCTGTCTCATAAATAAGATCACCTTCTTTATAAATTAATAAGATGATTGCAATCAAGGTTTTCATGGCAAATTTCTTTCCACAGGTTGATATTCCTGGCTCTCTTGGAAACAGTGCTATTTCCATTCTTGAGTGTCTTCCTAATCTATCTTTGCTAAATGGTATCAATGTGGCAAGTATAATAGAGAGTGGTAAGCATATAATTGATTCTGCACTTAAACCACGTCTGCCTGAATGGTCACCACAAGAATCCCTTCCTGAAAGAGTTATTGGTGCAATGTGGTTATATCTTATGACATACCGGCTTGCTGATGAAGAAAAGATCGATGAAACACCTGTTTGGTATGACTACTTGCAAGTTGCAACCTTTTCTCATCCCTTTATGGAGCATTGTGCGTAATTTTAATAACTTCGAGGTGAAGTTCTGCTAAAAGTTTGAACATAAATAATTATGATTGTGTCAACTAGCCCCTAGCCATAGGTAGGTTTGCCTAGTGTAGATATTCACCTTTAGACGATCTAGAACATTGCTTTGTTTTCACTTTTCTGCAGTCATAAATATTGAATCGAATGGCATGAAAAGAAAATTTTGTATCTGATTAACACTGTGTCTACTATTCTGTGGGTTTGTGTCTGGTTATTCATGTAGGTATGTCATGGATGAGCTGGGTTCAGCTATGCGCCACAGTGACGATGCAAACTTCAGAATAGCACCTTTCCTGTTCATGCCCGATGGTAAACTAGCTTCTGCCATAAGGTATTGTCCTTCGAACTTCAGCAACATGTTAGTAATATGTAGCTTGCTAATACCCAACATTTTCAGTTACACAATTTTGTGGCCTGTTCATGATGTTCATACTGGAGAAGAGTGCACTCGTGATTTCTTGTTTGGTGTTGGCGAGGACAAACAACGCTCGGCTAGGCTTACAGCCTGGTTCCACACACCAGAGAATTATTTTATCCAGGCAAGAAACTTAGTCTGTAAACTTGTGGTGCTGGGATAAACGGTCTTATCTTTTGTCCATATGTTTATCTTCCTCTCCCTTTTCAACCTTTTAGGAATTCAGAAAGTACAAGGAACAACTTCAATCAAGCAGTATCTGTCCTTCAAGAAAAGTAACACCGGTGACCAAAAGTATCCGTCCAAGTGATGGCCATGCACTTCGAGTATTTACCGACATACCCCAAGTAGAGGAGTTTCTAACACGTCCAGAATTTGTTCTCAGTAAGGAAAATTCCACCCTACCTTATCGTTTATCTGTTTTTTTTTTTGGTAAGGGTCAACTGTCTTTAGATAGAAATAAACTCTTAACTTCTGTTTATGTAAAACATTAACTTTAAGCTTGTAATCAACTTGTCCTCCTTTCCCTTGGAACTTCGTTTATGTAGGAAGCATTGATGTAGCTTGCTGGTGATGCACATTATAGAACATTCATTTATCTGGGTAGTTTGAACCCAATCGTAGATGTTCATTTGAGATTAAAAGCTTTTGTGTTTGCTAGCACTAGTTTACCTAAGGAATCAGCTAGGTATTATGTTTTCTCTGACCAGTCCCAAAAAAAATATTGATAGTGCTCTTCCATCGTATGGTTTACTTATATATGGTCACCAAATGTTCCTCATTTGTATCTATTTTGTATGCCTGCAGCATCTGATCCAAAGGAAGCTGACATCATTTGGGTAAGCATGCAAGTGGATTCGGAATTAAAGAATGCACTAGGACTTACAGACCAACAATATACAAATCAATTTCCTTTCGAAGCTTGCCTGGTCATGAAACATCACTTGGCAGAGACTATCCACAAGGTGAGCTACTGAGCTGTTTAGCTTAGATCTGTTTTTCAGGGAAAACATTGCGTGTAACTTATGTCAAAAAACCATACAATAAACACCATATTCTTTCAATGGCATCTGAAAATTAGCATCAACTTCTACAGGCATGGGGTTCACCTGAATGGCTTCAACCTACGTATAACCCGGAGACACATTTATCTCCACTCATTGGAGATTACTGTGTGAGAAAGAGAGATGGTATGGATAACTTATGGATTATGAAGCCTTGGAATATGGCAAGAACAATTGACACTACTGTTACTGGTGATTTATCTGCTATCATTAGACTCATGGAGACAGGTCCCAAAATATGCCAAAAATATATCGAATGCCCTGCACTTTTCCAAGGAAGGAAGTTTGATCTGCGGTATATTGTTTTCGTCCGCAGTATATGCCCTTTAGAGATATTTCTTTCTGATGTGTTTTGGGTATGACCTTTAATTCGAATGATACTTTTGATCGATCTCATTGTTCACTGTGATACTTACTAATTATTTTGTGACTCTGGTGCATATAACTTATTATTCGCAGGTTAGGTTAGCAAACAATCAGTACACTCTGGAGAAAACAAGCTTTTTTGAATATGAAACCCATTTCACCGTGATGGTATGTTCAAATTTGATTGTAACTATACATATTATTTGTGGGACCATGAATGTTAGTTGCTGTCAGGAGTGTATAAGTAGTGTGTGTTCAGATGTTCTTTCCTGTTCTTTAAGTGATTTTATGTTCTGGCTTTATGCTTATGTTATGTTTATAGTTTTTTTTTTCTAAGAATGAAAATGTGCTTTAGATGCCTAACTATATTTCCCTTCCAGAATTATATTGGAAGGGATGTTGGCATCAAATATCATGTGAAAGTCTAGATTCTAGAAATATGATATATTTTTTTCTCAGAATTAAAATGTGATTAGGATGCTTAACTATATTTCCCTTCCAGAATTATATTGGAAGGATGAACCATATGAACACACCAGAGTTTGTCAAGGAGTTTGAGAAGGAGCACCAAGGTCAGCTTGCATTTTTCTCTTTATATTATGCGTGTCTAGTTACTGACTTCTGACTAAAATTTTAGTTAAATGGCTGGAGATCCATGGACGCATACGGGATATGATACGATGTGTCTTTGAGTCAGCCACAGCTGTTCATCCTGAGATGCAGAACCCGTTCTCTAGGGCTATCTATGGGGTTGATGTCATGCTTGATAATAAATTCAATCCGAAGATTTTGGAGGTATGCCTTACCTACTTTCCTATCCTGCAACCGCTGAAATTTCGTTGCCTCCCCCTATTGTTGACATGACATGCTGAAACCTGCATATCTACACAACAATTGTAGTGCCGCGGCACATGGTTAAAGTTATATAGTACTGACGTGTGAAAGCCATTGCCCATATGCTTCACTGAACTAATGAAAGCCCTTGCGCATTCTCATTTTATGCCCAGCTCAGAATTAATTTCAGAAGATATGCCAGTATGTTGATTTAGATATTCTTGTTGTAGCCTCACATACATAGTATGTCAGGCAAGATGTGGTACAAAAGTCAGGAAGTAACACTCAGTTAATCTCTGTTTGCCACCCAAGCATAAGCTTCCAATTGAAATTTGACTATTACATTTGGAATTTTATAGATGTTCAGCTATTGTATTATATAAGCATTAAAACCTTCTTCCTAGTAATTCCTCTCACTGTTCCGAAAATTTATAAAATGAAATGCAGGTGACATATTGTCCGGACTGCACGAGGGCATGCAAATATGACACTCAAGCTCTCGTGGGAAGCCAGGGTGTCATCAGGGGCACTGAATTTTTCAATACAGTGTTTGGCTGCCTCTTTCTGGACGAGCTTAAAGATGTATCGCCGCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011976