BGIOSGA011982

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Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011982| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011982, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA011982

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011982, complete gene.

LocusTag

OSJNBA0050H14.20

Ensembl Transcript ID

BGIOSGA011982-TA

Ensembl Protein ID

BGIOSGA011982-PA

Length

4217

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4637401..4641617

Sequence Coding Region

4637401..4637682,4640654..4640723,4640819..4641228,4641342..4641483,4641592..4641617

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4637401..4641617 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4637401..4641617 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCGTAGCCACCACAGTCGCCGAGGTCCGGCGGCGACGGGCCGAAGGAATCAATCCGCAAAAGGCGGCGACGGCGGTGACGGTTGGGCGTCGCGGGAGGAAGATGGCGCGGCGGTGACAGCCGGGCGCCGCGGGAGGAAGACGGCGCCAGCCGAGCATCGCAGGAGGAAGACAGCGCTGCGGCATGGTGGGAGGAAGACAGCGCGGCGGCGGCGCCGAGAAGACGAGGATTTGGGGATTTTTGGCAAGGAGGCGGCGAGGATGTCTAGGCGGTGGCTGGCTCTGAACTGGGTGCAGACAAGGCTCCACGGGACGAGGAAACAAGATCACACTGCAGTGTCATCTCGACGCGCTCATACCTCCGGTGATCTCCACCGGAACGGCGACGAGCTCGACGACGGCTGGGCGGCGGCGATGCTGTCCATAGGCACGTTAGGGGGACCGAAGGGCCGTCATGGTTCTGGCACGCCGTGGACGACGGCGGCGGCGGGCGCCGACGAGCTCGACAGGCTGCAGGAGGAGCTCAGGCTGCTGGTTCGAGCTCAGGCGGTGGTGACCGGAGGCGAGGACGACGACGGCGGCGGCGGCGGCGGCAGGCAACGCAGGTCACTGAGCCGCACGTCGAGCTCCACGAATGGCAGAGAGGTGGTGGCCAAGCTGAAGCAGAGATCGATCAGGAAGATCATGGCCGCTGCTCTCGGTGGCCTCCTGCACCGGCCGAGCTGCAGGGAGACGATGCCTGAAGCGACTGTCAGTGAGATTATATGGTCATTGTTGCACAAGAACACGCATCCTGAAAAACCGGCGTTGCCACATACTGTGATGAAAGGTGATCCAACGGTTCCGACGCCACAGAAGGATAAACAAGAGGGCACCAAATGGATCAGAACAGATTCAGAGTACATTGTGTTGGATCTGGAGATATAG</cdnaseq>

Protein Sequence

<aaseq>MLRSHHSRRGPAATGRRNQSAKGGDGGDGWASREEDGAAVTAGRRGRKTAPAEHRRRKTALRHGGRKTARRRRREDEDLGIFGKEAARMSRRWLALNWVQTRLHGTRKQDHTAVSSRRAHTSGDLHRNGDELDDGWAAAMLSIGTLGGPKGRHGSGTPWTTAAAGADELDRLQEELRLLVRAQAVVTGGEDDDGGGGGGRQRRSLSRTSSSTNGREVVAKLKQRSIRKIMAAALGGLLHRPSCRETMPEATVSEIIWSLLHKNTHPEKPALPHTVMKGDPTVPTPQKDKQEGTKWIRTDSEYIVLDLEI</aaseq>

Gene Sequence

<dnaseqindica>1..282#3254..3323#3419..3828#3942..4083#4192..4217#ATGCTTCGTAGCCACCACAGTCGCCGAGGTCCGGCGGCGACGGGCCGAAGGAATCAATCCGCAAAAGGCGGCGACGGCGGTGACGGTTGGGCGTCGCGGGAGGAAGATGGCGCGGCGGTGACAGCCGGGCGCCGCGGGAGGAAGACGGCGCCAGCCGAGCATCGCAGGAGGAAGACAGCGCTGCGGCATGGTGGGAGGAAGACAGCGCGGCGGCGGCGCCGAGAAGACGAGGATTTGGGGATTTTTGGCAAGGAGGCGGCGAGGATGTCTAGGCGGTGGCTGGTGTGGTGATTGAGTGGACTGAGGGGATGGAGGGATGAGCGATGACCATGTGGACGGCTGGATGGAATCACCAGTTGGACATCTGACGGCGCATGCATGGCGAGGGACTGTAGTACTGTAGCAGCATTTCTCTGGCCTGAGATGAATCGCAACACTGTTGCTAGTGGGTCACGAAAACTAAAGATTTGATATGATTTGGGAGGATTAAATTTGTATGGCAAAAAAAAAATCCTATATGGTTCTTTGGAACAAAGGAATGGTTCTTCTCAATTCCTTTAAAATTCTTATGGAATGGGCCATTTCGAGCTCTTTTGAAATCCAAAAGTCCATAGAAGTGCTGGAGGAAGAGTAGCATGCATTTCTGTCCCATGTTTTTTTTCTTCCCGTGACATAAAGTTCATGTATTTTTTTCCTGTGTTATCCAAACGGCAATTTTTAAAATTTCCCAAGGTTTTTAATTCCTGTAGGAATTGAATAGGCATGGCACTTTATTGCTATGCTTTTCCTCTTACTGCGTTTCCACAATCCTGTGTTCCAAAAGAGCCCTAGTCATCCTTTGGAATGGAACAATGCTGGAGGATTTCTCAAAAATTGAACTAGTTTCCGCGGAAATCCTGCAAAATTCTTCCAAAAGGAGACCCTAAGCTGTACTGTTTAGTGATACTCAAACAAATTCTGCAGTTCTCTATGTCATAGTTGTCTTCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGATAAGAGTCAATACAATATAGAGATAGATATATCCTAGAGATAGAGTCCTAGAGATAAGATAGAGTCGTAGAGATAGAATCCTAGAGATAAATCTACTCTTACTTGTATTGTACTCCAAAGTCTCTATCCCCTATGTACTCCTATATATACCCCATGAGAGAGTCGATGTAATAGATTAGAAAACAACAAAATACAACAGTTTAGATTTTTCCACATGGTATCAGAGCCAAAGACCAACGTTGCTTGATCCGTTTCTACCTTCCGCTCGCGCCGCCCCGGGGAGATGAGATAATCGCCATATCCTCCCTGGGGCGCCACATCTACAATCCTCGGGAGAAGAGAAGGAGCGGAAGCCACGCCAGTATGAACAGGAGAAAAAGGAAGCAATGCATGAATCAATCCCATCTAGCAGATCAAGAAAGAACAAAAGGAGGAAAAGGAGATCGGTCCAAGCAATCATGCCGTACGATGGAAAATCAATCTCGCCGAAGCATGCTCTGACAGATTAATCTGCAAGACGCTTCATCAACGATATCGACCGCGTCCTCTACGACGGCAACGACCGCGACACCGACGACGGCATCGATCACGTCATCTACGACGACAACGACTGCATCAATCCAGCATCACTATTGTGATGACCGCTACACGGCGCAGAAGGACCAACCAAAGTGGTGGCCTCATCGCCAACGACATCCTCTGATATATGCAAGACGTCCCCAACGGCATCATCTGACATCTACAAGATGCAAGATGCTAACAATTGCAGTTTTTGTCTTCACACCATGGCGTAAATATTTTTTTTCGCCTTCGGCTATTTGCGGCTACATCAACTACCACGACCACGGCTACTTCATGATCGGCTACATCGACGAACATCTACAACAAAAATCATTGATGGAAACTCCAGTCAAAAGCGTCCGTGTCATCGCTATCATCCATGACACTCCCGCTATGACTGCGGGAGGGAATAGAGGAGAGTCAAGGGACGACACAGAAGGGGACGCAGGCACCAGGTGGAGGAACGACCATCAGAGATGCAATCGATGATGATGACTCAAAGAGATGAAGAAATAGAAGATTTCAAATCCAGTCGCAATCGTTAGCTTTGCTCCCGTTACGACTGAGGGGGAATGTTAGAAGTATAATATGTTAGTTAGAGATAAGAGTCAAATACAAATATAGAGATAAGATATATCCTAGAGATAAGATAGAGTCCTAGAGATAGAATCCTAGACTCCAAGTCTCTATCCCCTATGTACTCCTATATATACCCCATGAGAGGGTCGATCCAATATATCAGAAAACATCAGAATACAACATATTAGATTTTCCACACTGATCGCCGAAAAAAGTACACAAGAACTCCCACTATCCTGCTTACTTGCTTCCTGATTGGAGTATGAAACCGTCAATTTCAGAACACAGCAAACACATGATATGGCAACAAACACTTGAAAATTTATGTGGCTAAGTTTGTCACACGGCAATGCTTCTTGGAAGCACCATACTGCGATCTATCTTAATGTTTCTTTTCTCGGCTCTCGGTGCAATTTCCCCCTCTAGTACTGACTTTCCCTTTTCATCTCAGCTGCAATCAAGAATTTTGTTCATCGGTACTGGGTCCTGCTTCCAATCAAGCTCAACTGGGAATGTGTACAGCTCAAGATATATAAAATTGCATCCTAGTTTGCTGGACATGGCAGTGGCCATGAGCCTATCCTAAGATGAGATATCAACCAAATCTCCTGAGTAATTTGGTCACATGGAATATCTGTTCATCTCTCCTCAACTAGGCCAGATCCCTATTTGGAATGTTAAGGAGTACCAAGCTGCCATTCATCTTTGAGCTCTGCATTTCTGCCATAATTCCTGTGAGATGTGACAGTAATCACCTTGACACTGTAGTAGTCAGAGAGAAATTCTTCATTCTCCAATCCTGCATACGCATGCTTCTGTAAAGTTGCAACAAGATCAGAGTTTACCCCTATATATAGTGAACTTGGAGTCTTGGATCATCATCCATCTTCTTCTTCCCATTGAGTCCATTCATCCACATTTTTCTTCTGAACTCGCACACAAGAGGTCACGAGAACTGCTCATGAGGGTACACACTCGATTCTCTGGTTCTTCTGAACTTTTTTACATCGAATGACAAATGCTAATTCAGCAATCGTTGCTGCTGCTGGTTCTACTTCGGTTTCAGGCTCTGAACTGGGTGCAGACAAGGCTCCACGGGACGAGGAAACAAGATCACACTGCAGTGTCATCTCGACGTAAGTGACGATGGTTTTTTTTTTCTCCTTTCAGAATTCCCAGCGTTTCAGAGTTTCAGTCACGTAATTGTTGCTGAATCTTTGATCTCTTGCAGGCGCTCATACCTCCGGTGATCTCCACCGGAACGGCGACGAGCTCGACGACGGCTGGGCGGCGGCGATGCTGTCCATAGGCACGTTAGGGGGACCGAAGGGCCGTCATGGTTCTGGCACGCCGTGGACGACGGCGGCGGCGGGCGCCGACGAGCTCGACAGGCTGCAGGAGGAGCTCAGGCTGCTGGTTCGAGCTCAGGCGGTGGTGACCGGAGGCGAGGACGACGACGGCGGCGGCGGCGGCGGCAGGCAACGCAGGTCACTGAGCCGCACGTCGAGCTCCACGAATGGCAGAGAGGTGGTGGCCAAGCTGAAGCAGAGATCGATCAGGAAGATCATGGCCGCTGCTCTCGGTGGCCTCCTGCACCGGCCGAGCTGCAGGGAGACGATGCCTGAAGCGACTGTCAGTGAGGTAGTAGGAGTAGGACTACTCCAATATAAAGAGCATATTTGTTCATTCGATTTTCAGAAATCAGAAGGAAATTCGTATTGGTTCTTGTGATTTCATGCTGATATGTTTCGCAGATTATATGGTCATTGTTGCACAAGAACACGCATCCTGAAAAACCGGCGTTGCCACATACTGTGATGAAAGGTGATCCAACGGTTCCGACGCCACAGAAGGATAAACAAGAGGGCACCAAATGGATCAGAACAGATTCAGAGTGTAAGTTCATGTTCGTCTGACAGAAAATGAGAATAGTATATTGTAGCGGTTCTTGCAGGCTAACATATATAGAATCTGATGTTTTACATCCTTGAATTCATTCCCCAGACATTGTGTTGGATCTGGAGATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011982