Os12g0421000

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Revision as of 10:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0421000| Description = Similar to Barley stem rust resistance protein| Version = NM_001073192.1 GI:115488345 GeneID:4352086| Length = 1601 ...")
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Gene Name

Os12g0421000

Description

Similar to Barley stem rust resistance protein

Version

NM_001073192.1 GI:115488345 GeneID:4352086

Length

1601 bp

Definition

Oryza sativa Japonica Group Os12g0421000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:13325389..13326989

Sequence Coding Region

13325649..13325657,13325846..13325921,13326048..13326682

Expression

GEO Profiles:Os12g0421000

Genome Context

<gbrowseImage1> name=NC_008405:13325389..13326989 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:13325389..13326989 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagaaaattgtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaaggccgtctcctcggttatcggaatcgacgccatttcgatggacatggcgtcgcggaagatgacggtgatcggcacggtggatccggtggacgtggtgagcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtcggaccggccaaggagccggagaagaaggaggagaagaaggaggaggccaagaaggacgccggcggcggcggcggcgacggcaagaaggaaggaggtgacggcaagaaggaggagggcggcgacggcaagaaggagggggaaggcaagaaggaaggcgacggcggcggcgacaagaaggagggcgaaggcaagaaggaaggcgacggcggcggcgacaagaaggacggcaacggcgacggcaagaaggagggcgacgcgaaggccgccaagaaggaggaaggcggcggcggcggcggcgacggcggagggaagaaaccagccgcggtggcgccgatgccgatgccgatgccgctgcaccacctcccaccgcagtacttcaacatggagtacatgaaccagtatcaccggccgccgccgccgccgccggcctacccgtacgtgccgccgccgcagtactactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgctga</cdnaseq>

Protein Sequence

<aaseq>MSKKIVVKLDLHDNKDKQKAMKAVSSVIGIDAISMDMASRKMTV IGTVDPVDVVSKLRKASWAAYIESVGPAKEPEKKEEKKEEAKKDAGGGGGDGKKEGGD GKKEEGGDGKKEGEGKKEGDGGGDKKEGEGKKEGDGGGDKKDGNGDGKKEGDAKAAKK EEGGGGGGDGGGKKPAAVAPMPMPMPLHHLPPQYFNMEYMNQYHRPPPPPPAYPYVPP PQYYYVRNMSMEENPNSCAIC</aaseq>

Gene Sequence

<dnaseqindica>261..269#458..533#660..1294#acgatgatctctactggtagtatcacggacggcacaatcaacggcgggcgcttcaaaaacgtgaagggaagtgggagtatttaggacccttcccagcaatctcacccatccctccccttcccctgcttcggcagctgctggtgtggtgatacactcgcctagctttggccaccactaatctctgctctgctttttctcctctgctccactgatcatccaattcttctcttcctgattggccattctgattggctggtgacatgtcgaaggtgagcctttcttgctcttggattctgatcctgattagctcgtgtagaatcaggatcatcatcttttcttcttcagatcccaacaaccttttttcttgcttgtcttcctgaattgtatcatgttcaggtgtttgtgattcacacattgccaaccttaaccctctgtttcacatgttgctctgctgcagaaaattgtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaaggccgtctcctcggttatcggtacgaacaatcgtctcgaatctcgatcgatgcatccaccatttctgtctgtgattctgtgtacatcaacgaactctctgaagtctgaacatatgtctgattgattgttgtgtgtgcgtgtgtcaggaatcgacgccatttcgatggacatggcgtcgcggaagatgacggtgatcggcacggtggatccggtggacgtggtgagcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtcggaccggccaaggagccggagaagaaggaggagaagaaggaggaggccaagaaggacgccggcggcggcggcggcgacggcaagaaggaaggaggtgacggcaagaaggaggagggcggcgacggcaagaaggagggggaaggcaagaaggaaggcgacggcggcggcgacaagaaggagggcgaaggcaagaaggaaggcgacggcggcggcgacaagaaggacggcaacggcgacggcaagaaggagggcgacgcgaaggccgccaagaaggaggaaggcggcggcggcggcggcgacggcggagggaagaaaccagccgcggtggcgccgatgccgatgccgatgccgctgcaccacctcccaccgcagtacttcaacatggagtacatgaaccagtatcaccggccgccgccgccgccgccggcctacccgtacgtgccgccgccgcagtactactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgctgatcgaaaaaaaaaaacgccatggcaaatgagcaccatgaatgctttgcatctcaatgcatgatctgtgtgcacttctgcagcaggtaggcgacgcgtgcgtgcgtacacgcttgtgttcttgatcgatcggccgtgatgtgtatagtataagatctcagtgtttatgatgagaagaacaaattaagtttgcgtgatcgaaccagtacgtacatagtagtaagttcgttttttttttcttttcgacaaattcaaccaacctcttcatcggtggatatatccggttaatgaaatatatgatgagaccaac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0421000, RefSeq:Os12g0421000