BGIOSGA011989

From RiceWiki
Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA011989| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011989, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA011989

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011989, complete gene.

LocusTag

OSJNBB0076N15.17

Ensembl Transcript ID

BGIOSGA011989-TA

Ensembl Protein ID

BGIOSGA011989-PA

Length

3011

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4710836..4713846

Sequence Coding Region

4710836..4711339,4711542..4711782,4712727..4712905,4713069..4713421,4713507..4713846

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4710836..4713846 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4710836..4713846 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGCAGCAGCAGCAGCAGAAGGAGGGGGGCGCGAGGCGCACGAGGGAGGAGGTGCCGGCGGTGGGGAGGGTGGCGATCATCGGCGGCGGGATCAGCGGGCTGGCGGCGGCGAAGCAGCTGGCGGCGCACGACCCGGTGGTGTTCGAGGCGACGCCGCACATCGGCGGGGTCTGGAAGCACTGCGCGTACCGGTCGACGCGGCTGCAGACGCCGCGGCCGGACTACGAGTTCTCCGACATGGCGTGGCCCAACCGCGACGACCCCTCGTTCCCCACCCACGTCGAGATCGTCGACTACCTCGAGGACTACGCCGACAGGTTCGGCCTCTGGCGCTACATCGCGCTCCGCTCCAAGGTCGTCGGCGTCAAGTTCCTCGGCGGCCCCTCCGCCGGATTCACCGAGCTCTGGAGCGGCTCCGGCGAGCCCCTCCAGGGCAAGCCCATGTGGGAGCTCGCCGTCTCCTCAACCGACGACCCCGACTCCGACGACGTCCAGTTGTACAAGTTCGAGTTCGTGGTGATGTGCACGGGGAAGTACGGCGACGTGGCGAGGATGCCGGTGTTCCCGCCGGGGAAGGGACCGGAGGTGTTCAAGGGGAAGGTGATGCATTCGCTGGACTACTGCAAGCTCAACGAGCAGGAGACCGTCGAGCTCATGAGAGGCAAGAAGGTCGTCGTCGTTGGCTACAAGAAGAGTGCTATTGATCTAGCCCTTGAATGCGCCGAGGCCAACCAAGGTGAGGGAGGGCAGCCGTGCACGATGCTGGTGAGGACCCTGCATTGGGTGGTGCCATCCTACTCAATCTGGGGCTTGCCCTTCTTCCTCTTCTACTCCACTCGCTTCTCCCAGCTCTTCTACGAGAGGCCCAACCAGGGCATCTTCAGATCACTCCTCTGCCGCCTCATGACCCCATTGAAGGCTGGGGTGTCCAAGTTCATCGAGTCGTACCTGTCATGGAAGCTTCCACTGAGCAGGTACGGGTTGAGGCCGGATCACCCGTTCGTGGAGGACTACGCGAGCTGCCAGATGGCCATCCTGCCCGACGGCTTCTTCGACATGGCCGACCGCGACCTGATCCGCTTCCGGCGCTCCGCCGGCGGCTGGTGCTTCTCCGAGAACGGCGTCGTCCTCGACGACGGCACCCACGTCGACGCCGACCTCGTCTTCCTCGCCACCGGCTTCGAGGGCAAGGACAAGCTCCGCTCCGTCCTCCCCGAGCCCTTCCGCGGCCTCGTCGTTAACAAATCCTCCATGATGCCCCTCTACCGGGGGACGATACATCCGCTGATACCGAACATGGCGTTCGTGGGGTACGTGGAGAGCGTGTCGAACCTGCACACGTCGGAGCTGAGGTGCAGGTGGCTGGCGGGGCTGCTGGGGGGGAGGTTCGCGCTGCCGGCGGTGGAGGAGATGGTGAGGCACGTCGACGGCGAGACGGAGGCGATGCGGCGGACGACGCGGTTCTACCGCCGCCACTGCATCTCCACCTACAGCATCCACGACAGCGACGCCATGTGCGCCGACCTCGGCTCCCGCGTCCACCGCAAGTCCAACTTCCTCGCCGAGCTCTTCGCCCCCTACAACAACCAGGACTACAAGGAAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAQQQQQKEGGARRTREEVPAVGRVAIIGGGISGLAAAKQLAAHDPVVFEATPHIGGVWKHCAYRSTRLQTPRPDYEFSDMAWPNRDDPSFPTHVEIVDYLEDYADRFGLWRYIALRSKVVGVKFLGGPSAGFTELWSGSGEPLQGKPMWELAVSSTDDPDSDDVQLYKFEFVVMCTGKYGDVARMPVFPPGKGPEVFKGKVMHSLDYCKLNEQETVELMRGKKVVVVGYKKSAIDLALECAEANQGEGGQPCTMLVRTLHWVVPSYSIWGLPFFLFYSTRFSQLFYERPNQGIFRSLLCRLMTPLKAGVSKFIESYLSWKLPLSRYGLRPDHPFVEDYASCQMAILPDGFFDMADRDLIRFRRSAGGWCFSENGVVLDDGTHVDADLVFLATGFEGKDKLRSVLPEPFRGLVVNKSSMMPLYRGTIHPLIPNMAFVGYVESVSNLHTSELRCRWLAGLLGGRFALPAVEEMVRHVDGETEAMRRTTRFYRRHCISTYSIHDSDAMCADLGSRVHRKSNFLAELFAPYNNQDYKEE</aaseq>

Gene Sequence

<dnaseqindica>1..504#707..947#1892..2070#2234..2586#2672..3011#ATGGCGGCGGCGCAGCAGCAGCAGCAGAAGGAGGGGGGCGCGAGGCGCACGAGGGAGGAGGTGCCGGCGGTGGGGAGGGTGGCGATCATCGGCGGCGGGATCAGCGGGCTGGCGGCGGCGAAGCAGCTGGCGGCGCACGACCCGGTGGTGTTCGAGGCGACGCCGCACATCGGCGGGGTCTGGAAGCACTGCGCGTACCGGTCGACGCGGCTGCAGACGCCGCGGCCGGACTACGAGTTCTCCGACATGGCGTGGCCCAACCGCGACGACCCCTCGTTCCCCACCCACGTCGAGATCGTCGACTACCTCGAGGACTACGCCGACAGGTTCGGCCTCTGGCGCTACATCGCGCTCCGCTCCAAGGTCGTCGGCGTCAAGTTCCTCGGCGGCCCCTCCGCCGGATTCACCGAGCTCTGGAGCGGCTCCGGCGAGCCCCTCCAGGGCAAGCCCATGTGGGAGCTCGCCGTCTCCTCAACCGACGACCCCGACTCCGACGACGTCCAGGTAAATTAACATACTCCTCCCCTACCATAGGCCGGTCTGGCCGATTGTGTTGTGTAACAAAAACATAACTCTATTACTCTAATATATTGACGTGCAATAATCCTCGAAAAAACGTCTAGGTAAACATACCATGTTAATTCTCACACACCTAGAGCTTGATTTCCGGTCATGGTGATCGATGGATTGGGTCGATATGATGCAGTTGTACAAGTTCGAGTTCGTGGTGATGTGCACGGGGAAGTACGGCGACGTGGCGAGGATGCCGGTGTTCCCGCCGGGGAAGGGACCGGAGGTGTTCAAGGGGAAGGTGATGCATTCGCTGGACTACTGCAAGCTCAACGAGCAGGAGACCGTCGAGCTCATGAGAGGCAAGAAGGTCGTCGTCGTTGGCTACAAGAAGAGTGCTATTGATCTAGCCCTTGAATGCGCCGAGGCCAACCAAGGTAAAAAAAAATTTAAAAAAATAATTTACTCACCATCGATCGTTGAATATTCGTCTCAGTAAAAAGCTCGATCAATATGCATGGATGTTCTATGTATTTACCGTTGTAGATTAGGTGCAAATTCTCACAAAGACAAAACCATTTTTGTTCTTAATAAATGACTATGTATGTATTGAGTATCTAGGAAATTAACATGCATGTATAACTAGCTAGGCGCAGTCAGATGAGCTATCATGCATGCATGAACGCGGAGATTAACAAGTAAATCATAGAAAAAGAAGATTCATGCATGCCAAGTTCACACATAACTAACTCCAAAGGAATTACATATTTATATCGTGGAAACGTCCAATCATTTGATGAACTTGGGACGGAATTAATATTGTACACTTGCATGGTATAGTAGTAGTATTAATTTGCATACCCAATTTGGTGACATGCATGTAACGCCGTGACAGCAACCTGTCCTAACGAAATTCAGGAGACCCAATCTTAGTTAGCTTTGACACCCTGTTTCAGAAAAGGTCACTCTTGTCTTGATCCGTCGTACACTCCATCTAGAATTTTATTTCTTTTTATGCCACATGTAGCCAAGCCTCCTCTTGCTCTATACAGGTTCAAAGTACGCTAAACACAACACATACGCATATATGCTCTGACTTTTCAAGCTGAAGTGTTTTATATGCTAGCTACGCGTTCCACTTGTCAATCTCTTTTTTCTACTCTGAAACTGCGCAGAGATGATCACTCCAACATTTTGACTGTGTACTTGACCATATCAAAGTGCTAGCTTAGTATAATAATTCCTTTTGTTTGGCCATCAAGTTAGTAATTAATTCCAAGTTGATCATGCAGCAACAAAAACTATCTGTCATTAATTCTGAAGAATTATTAATCCTTTAATTTCAAGCTTGTTCAGTTCTGATTGATTGGTTTGGTTGCAGGTGAGGGAGGGCAGCCGTGCACGATGCTGGTGAGGACCCTGCATTGGGTGGTGCCATCCTACTCAATCTGGGGCTTGCCCTTCTTCCTCTTCTACTCCACTCGCTTCTCCCAGCTCTTCTACGAGAGGCCCAACCAGGGCATCTTCAGATCACTCCTCTGCCGCCTCATGACCCCATTGGTATGTACATACTCACTCGATCTACTCATTTCATGTGAACATCTTATCAGAAATTAAGTTCAGAATGTGCATGCTCAAGACTTTGACAATATTATTTTGTTTGTAGTAGCTAGCTAGCTTGTCAGCATCATAATTTACCATGTTTTTTTTTTTGGGAGAGCAGAAGGCTGGGGTGTCCAAGTTCATCGAGTCGTACCTGTCATGGAAGCTTCCACTGAGCAGGTACGGGTTGAGGCCGGATCACCCGTTCGTGGAGGACTACGCGAGCTGCCAGATGGCCATCCTGCCCGACGGCTTCTTCGACATGGCCGACCGCGACCTGATCCGCTTCCGGCGCTCCGCCGGCGGCTGGTGCTTCTCCGAGAACGGCGTCGTCCTCGACGACGGCACCCACGTCGACGCCGACCTCGTCTTCCTCGCCACCGGCTTCGAGGGCAAGGACAAGCTCCGCTCCGTCCTCCCCGAGCCCTTCCGCGGCCTCGTCGTTAACAAATCCTCCATGATGCCCCTCTACCGGTACCCACACGTTAACCAACCAATTACACGGCAGACGCACCAGCACAATTAGCTAATGGATGAGTGTTTTTTTTTTTTTGTGTAGGGGGACGATACATCCGCTGATACCGAACATGGCGTTCGTGGGGTACGTGGAGAGCGTGTCGAACCTGCACACGTCGGAGCTGAGGTGCAGGTGGCTGGCGGGGCTGCTGGGGGGGAGGTTCGCGCTGCCGGCGGTGGAGGAGATGGTGAGGCACGTCGACGGCGAGACGGAGGCGATGCGGCGGACGACGCGGTTCTACCGCCGCCACTGCATCTCCACCTACAGCATCCACGACAGCGACGCCATGTGCGCCGACCTCGGCTCCCGCGTCCACCGCAAGTCCAACTTCCTCGCCGAGCTCTTCGCCCCCTACAACAACCAGGACTACAAGGAAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011989