Os12g0422200

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Revision as of 10:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0422200| Description = Protein of unknown function DUF295 family protein| Version = NM_001073193.1 GI:115488347 GeneID:4352087| Length = 15...")
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Gene Name

Os12g0422200

Description

Protein of unknown function DUF295 family protein

Version

NM_001073193.1 GI:115488347 GeneID:4352087

Length

1524 bp

Definition

Oryza sativa Japonica Group Os12g0422200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:13418372..13419895

Sequence Coding Region

13418479..13419672

Expression

GEO Profiles:Os12g0422200

Genome Context

<gbrowseImage1> name=NC_008405:13418372..13419895 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:13418372..13419895 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacggcgagtctccgccatgggcggagctcgtccccgacatcgtccgcaagatcggccgccacctcctgtgcgagatcgaccgccaccacgcggatggcctctgcaggtcctggcgcgacgcgcttctacaactccggcccccgcctccgccgctcccgcggcttgtcctcccggaagccgacgggcccgcgttctactgcgtccccagcggctgccgcccccaccccttcgtcctcccgcccgccgcgctccgcgcgcggtgcttcggctcgtacaacggcgcctggatcttccaggccgtcgaccaggcggcgaaccacgtcctcctcaacctcatcacccaccagcagctcaacctccccaacctgatccgtttcccctccttccggcttccgggattgacatttgacttcgaggtcgccttcgtcgccgccaccctctctagccagccgactgatcagggatgcgtcggcgccagcatcatcggcttcaaacgcaggcccctcaacccacggcacatcgcgttctggcgcatgggcgatgaggcgttctcgcagtccatcgagtcgaggtggattgacgaggagctggaactggatgtggtggacctcctgtacagcggccatggcgctggcgccttcctcttcctcacccgaggggaaaacatccgtgtgtttcgtcaaccgatattccctctcggagacatgcagacgacagtgctctacttcgagcggcgcggtgacgacgacgacgacgacgggcggccggtccttgatcgctacctcgtggagtcccgggggaagctgctcatggtcgtcaggttaggagatcgtgagcctggccgcttgccgaccacgacgttccgggtgttcgagagagaagacgagctgttcaacaactactggaccaagctgcccgaccttggcggccgaatgctgttcgtcggaagaggctgctccagatcgtacgaagcggcagatgggtaccccggcatggagggcgtctacttcctggacgaccggagcttccacgacccgatggttgtgtacaaggatgccgcccaacggcggtatccctgcagcgacaacgggagatggtcgggagcaccgccaccagcggaggtagagcgctgcttcccagagcaaggtccgtcgaactactcccctccggtttggattctcccatga</cdnaseq>

Protein Sequence

<aaseq>MADGESPPWAELVPDIVRKIGRHLLCEIDRHHADGLCRSWRDAL LQLRPPPPPLPRLVLPEADGPAFYCVPSGCRPHPFVLPPAALRARCFGSYNGAWIFQA VDQAANHVLLNLITHQQLNLPNLIRFPSFRLPGLTFDFEVAFVAATLSSQPTDQGCVG ASIIGFKRRPLNPRHIAFWRMGDEAFSQSIESRWIDEELELDVVDLLYSGHGAGAFLF LTRGENIRVFRQPIFPLGDMQTTVLYFERRGDDDDDDGRPVLDRYLVESRGKLLMVVR LGDREPGRLPTTTFRVFEREDELFNNYWTKLPDLGGRMLFVGRGCSRSYEAADGYPGM EGVYFLDDRSFHDPMVVYKDAAQRRYPCSDNGRWSGAPPPAEVERCFPEQGPSNYSPP VWILP</aaseq>

Gene Sequence

<dnaseqindica>108..1301#gtcgtcttcaacctctctcgtgtcgcgtgccattcgccatcgccaccacctccactactcgatcccctcccatccctccggaacctccactactactcgccccaccaatggctgacggcgagtctccgccatgggcggagctcgtccccgacatcgtccgcaagatcggccgccacctcctgtgcgagatcgaccgccaccacgcggatggcctctgcaggtcctggcgcgacgcgcttctacaactccggcccccgcctccgccgctcccgcggcttgtcctcccggaagccgacgggcccgcgttctactgcgtccccagcggctgccgcccccaccccttcgtcctcccgcccgccgcgctccgcgcgcggtgcttcggctcgtacaacggcgcctggatcttccaggccgtcgaccaggcggcgaaccacgtcctcctcaacctcatcacccaccagcagctcaacctccccaacctgatccgtttcccctccttccggcttccgggattgacatttgacttcgaggtcgccttcgtcgccgccaccctctctagccagccgactgatcagggatgcgtcggcgccagcatcatcggcttcaaacgcaggcccctcaacccacggcacatcgcgttctggcgcatgggcgatgaggcgttctcgcagtccatcgagtcgaggtggattgacgaggagctggaactggatgtggtggacctcctgtacagcggccatggcgctggcgccttcctcttcctcacccgaggggaaaacatccgtgtgtttcgtcaaccgatattccctctcggagacatgcagacgacagtgctctacttcgagcggcgcggtgacgacgacgacgacgacgggcggccggtccttgatcgctacctcgtggagtcccgggggaagctgctcatggtcgtcaggttaggagatcgtgagcctggccgcttgccgaccacgacgttccgggtgttcgagagagaagacgagctgttcaacaactactggaccaagctgcccgaccttggcggccgaatgctgttcgtcggaagaggctgctccagatcgtacgaagcggcagatgggtaccccggcatggagggcgtctacttcctggacgaccggagcttccacgacccgatggttgtgtacaaggatgccgcccaacggcggtatccctgcagcgacaacgggagatggtcgggagcaccgccaccagcggaggtagagcgctgcttcccagagcaaggtccgtcgaactactcccctccggtttggattctcccatgaggcgcacgacacatgtttttggttgttgaaattgttgccggtgatcaggctagtctgtgatcgttgctaagctttcatgccttcatcagcatgtactgtgttagtgtgtttattcgttgagtttggatggttttctcgtgttaaaattgttactggtgtaagctgaagcaggattgctcaattcagtggagaaattgatctgcaggtgacttaccgttccctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0422200, RefSeq:Os12g0422200