BGIOSGA012004

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Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012004| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012004, complete gene.| tag = OsJ_096...")
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Gene Name

BGIOSGA012004

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012004, complete gene.

LocusTag

OsJ_09696

Ensembl Transcript ID

BGIOSGA012004-TA

Ensembl Protein ID

BGIOSGA012004-PA

Length

3550

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4891935..4895484

Sequence Coding Region

4891935..4892129,4893125..4893212,4893377..4893443,4893683..4893801,4893932..4894027
,4894142..4894197,4894523..4894608,4895038..4895172,4895340..4895391
,4895470..4895484

Genome Context

<gbrowseImage1> name=IndicaChromosome03:4891935..4895484 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:4891935..4895484 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTTGTCCTCCTCTTCGCACCTCCTCCCCTTCTCCCGGCCTCCCGCGACCTTCCCACGAGCACGCCACGCCGGCGGCGGGAGGGGCCGAGCCGGCGCCACGGGGAGGTTCATGGCGTGCTCCTCGCCCCCTCCTCCCGACGTCGTGGTCACCCGCGAGCGCGGGAAGAACGCCAAGCTCATCGCCGCGCTGGAAAAACATAATGTACAAAGTCTTGAGCTTCCTCTTATTAAACATGTTGAAGGGCCAGATACAGATAGGCTTTCTGCTGTCCTGCGCGATGAAAAGTTTGACTGGATCACTATAACATCTCCTGAGGCAGCTGCTGTGTTCCTTGAGGGATGGAAGGCTGCTGGAAATCCTAAGGTACGAATAGCGGTTGTTGGAGCAGGTACTGAAAGAGTTTTTGACGAAGTAATTCAATACAATGATGGATCCCTTGAGGTTGCATTTTCTCCTTCTAAAGCTATGGGTAAATTTTTGGCCTCAGAGCTTCCAAGGACCACTGAAACTACTTGTAAAGTGTTATATCCTGCATCTGCAAAGGCTGGCCATGAAATCCAGAATGGGCTATCAAATCGAGGATTTGAGGTGACAAGACTGAACACATATACAACTGTACCTGTACAGGATGTCGATCCGCTAATATTAAAGCCTGCTCTTTCAGCTCCAGTTGTTGCAGTAGCTTCTCCTTCTGCTCTCCGAGCTTGGCTAAATCTTGCTTCACAAGTTGACAACTGGGGCAACGCCATTGCCTGCATAGGCGAGACGACTGCCTCAGCAGCTAAGAAATTTGGCCTGAAGAGCATATATTATCCTACCACCCCGGGACTTGACGGGTGGGTTGAAAGCATCCTTGAAGCGCTCAGAGCCCATGGGCAATCGAAAGAGGCCCCAGGGTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MALSSSSHLLPFSRPPATFPRARHAGGGRGRAGATGRFMACSSPPPPDVVVTRERGKNAKLIAALEKHNVQSLELPLIKHVEGPDTDRLSAVLRDEKFDWITITSPEAAAVFLEGWKAAGNPKVRIAVVGAGTERVFDEVIQYNDGSLEVAFSPSKAMGKFLASELPRTTETTCKVLYPASAKAGHEIQNGLSNRGFEVTRLNTYTTVPVQDVDPLILKPALSAPVVAVASPSALRAWLNLASQVDNWGNAIACIGETTASAAKKFGLKSIYYPTTPGLDGWVESILEALRAHGQSKEAPGC</aaseq>

Gene Sequence

<dnaseqindica>1..195#1191..1278#1443..1509#1749..1867#1998..2093#2208..2263#2589..2674#3104..3238#3406..3457#3536..3550#ATGGCCTTGTCCTCCTCTTCGCACCTCCTCCCCTTCTCCCGGCCTCCCGCGACCTTCCCACGAGCACGCCACGCCGGCGGCGGGAGGGGCCGAGCCGGCGCCACGGGGAGGTTCATGGCGTGCTCCTCGCCCCCTCCTCCCGACGTCGTGGTCACCCGCGAGCGCGGGAAGAACGCCAAGCTCATCGCCGCGCTGGTTTGGTTCCCAAATCGACACTCCTGCATTGTTCACTTGTACCTAACGCATAGTTTTTTTTTGGGTGGGGGTGAGGGGAAGCGTAGGGGATTAGGGGATTAGCAATAGAGATGGAGAATACGCATCTTCCATTTTTGTTTTGTGATACCCTGTGAGATCGTCGCGTATTTTAGTGTTGTGATTTTAGGTGGCCTGGCCGACTGTATAGAGGGAAATTTACGGGCTAATTATACTGTTTAGGACCCGGGAGGCTCACTAATTGGTGCGAGATTTCAGTTAATGTACTGATTTCCATCTAGGAAAAGGTTGGCGTGTGCTGGATATGAGATATTTGGTGCTAACTCGTTGAACATGGTGCCGCGTGCTAATGGAACTCACCATTCATGTCTTCAACTGGTCGGAGCTTGGAGTTTAGAGTTAGTTGTTTTGCAATACAGTTCAGTTTTATCTGATTACAAATGCAATGCAATGCTATGTTATGGAAACCATTTGTCATTTTGTTAGTATCAGTCTTTCATGTAAGAACATATCCCTTCTTTCATCCATTTCATATGATACAAGTTGGGCATATGATCTGCATTGCCTATTTTATTCCATTAGCTTAGAGAAGTTTTGTGGATGGTATGACTTCCTCTCTTTTTTTTTATGATCATTGACCTAATAACTTTAATCTACTATTAGTTTATTATCTTGGATCACAGTATATGAGATCTTTACCTTTATTCTCAGCTGTTGTTTAGCGTCTCATGAATCACGATACATCATTAATACGGAGTGTGAAGTCTGAATTTTTCTGATCATATCTAGCCATATTCTAACTGCTATACGTATTCAACTGGGCCATAGATGGTTGTTACTCCAATGGATTTGAGCACATTCCTACATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCATCCAGCTTATTGCTATCTAGTTTTCACATCAGTTTTCTAATTGAATTTTGTAGGAAAAACATAATGTACAAAGTCTTGAGCTTCCTCTTATTAAACATGTTGAAGGGCCAGATACAGATAGGCTTTCTGCTGTCCTGCGCGGTAAGTAGTTCAGTCTTTATTTTTCTAGTAATATAACTTTATGTGTTTCTGTCTTGCGTTGTATATCCATTGCTCCACATATAGTATATTCTCATTACACTTGCTTTGCAAAATCATAATAAAAGTATTCCATAGTTTAGTCACTTAATATTTTGTATTTTCAGATGAAAAGTTTGACTGGATCACTATAACATCTCCTGAGGCAGCTGCTGTGTTCCTTGAGGGATGGAAGTAAGATTCAAACATATTGCAATTATCGTGCGCAATTGCTACAGAAATATAAATTGTGCATCATTTCACACTTCATTCGTCCTAAGTTCTGGGCTTTGTGGCATAGGTTTGTGCACTCTGTGATTTGCTTGTTGTCTAACCCAATATATGATATGTTCTTCAATCAATCCATTATTCTGTGATGCACCAGAACAATCCAAAACCACCATATTAACACAAGTTACATAACGACCTATCAGGGCTGCTGGAAATCCTAAGGTACGAATAGCGGTTGTTGGAGCAGGTACTGAAAGAGTTTTTGACGAAGTAATTCAATACAATGATGGATCCCTTGAGGTTGCATTTTCTCCTTCTAAAGGTATCTTGCCTCATAGGATGTAATTTTCATTGCATGTCAACTAATTCGTATGGTGCTCTCATATATTGAAGACTTGGAACTGTTTTCAGTCAGTAAGGTATTTCTTTTTCATTTTTTTTTATTTCATCAGCTATGGGTAAATTTTTGGCCTCAGAGCTTCCAAGGACCACTGAAACTACTTGTAAAGTGTTATATCCTGCATCTGCAAAGGCTGGCCATGAAATCCGTGAGTCAGATTTGGTTTTATCCTTCTGGTTACATGCTTGCACCTGCATTTCCACAATGACCACATCTGCATCATATCTTCAGCTGTTATGTTAACTAATTATGCGGATTGCAGAGAATGGGCTATCAAATCGAGGATTTGAGGTGACAAGACTGAACACATATACAACTGTATGTTTTTCTTTTAAATTAAATTATTACATTTGCCTTATTAATTCTTATTTGCTTACTTTATATGAGTAATGTGAAATTTTGGCCCCTTGTCTTGTGCACTTTGGACCTCGTTCTATTTATCTGCATTCAGACATCCCTTACCTGATAGTATCATATTTTAGCTTGATATGGTTGACTGTGACATATGTTACCGTAGTAGAGGTTTTGTATTTCAAGAAACAGTAGTAATTTTCATGGATTACATTTTATCTTTTCAAAGTTTGTGTGCACGTGAATCTTGGATTTTTGTTTTGACCTATGAAATGGTTGTATATACATGCAGGTACCTGTACAGGATGTCGATCCGCTAATATTAAAGCCTGCTCTTTCAGCTCCAGTTGTTGCAGTAGCTTCTCCTTCTGCTCTCCGGTAATATATAATGTGTCTATGGCTGCCTCGGAACAAATTTAAAACCGTGTTCATATAATAATAATGGTATGCTAGTACTCCCTAATTAGATGGTTCAGGTAAAGTACGTATGTGGGAGAGATCACAAATTCTGCATTGAAACATTTTTTTTTTTGGAATACGCAAGAGATTTGTGTACCATTTCATTAACACGGGGCTTTGACAAGGTTGGGGCTGATTTCTATTTGGACGTGTTTCTTTATGATCCATAAAGGGGTATACCGATTCAAAGGCACACAAACAGCTTTATTTGCCATCTCAGTTATTTGCAAAGCTAGATTATTTGCGAACTGTCTCCCTGGGCTGACTTTATGTTACATATTGCCATCACAATTTTCCTTTTCCACAGTGCTTACTTTATTCAGTTTTGGGGTTATCATGATGATGCAGAGCTTGGCTAAATCTTGCTTCACAAGTTGACAACTGGGGCAACGCCATTGCCTGCATAGGCGAGACGACTGCCTCAGCAGCTAAGAAATTTGGCCTGAAGAGCATATATTATCCTACCACCCCGGGACTTGACGGGTAAGCACACATCACGAACCTTTTGAATACCATTATCCAATTGTCAAGGACACGTCTGAATGGTGGACATTCAGAACTGGTATCAACAAAGCGTCACATCATATGTTGTGAAGCAAAATTGACTACTGTATCATCCATATGCACAATTTTCATATTGTTTTTCACAGGTGGGTTGAAAGCATCCTTGAAGCGCTCAGAGCCCATGGGCAATCGAAAGAGGTCCTCTCTCGTCCTCGTGGATACTTTCCTTGAATTTCTCAGCTTCTTTCGTCACACTTTTTTCTGTTTCTACTGTAGGCCCCAGGGTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012004