BGIOSGA012022

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Revision as of 09:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012022| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012022, complete gene.| tag = OsI_103...")
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Gene Name

BGIOSGA012022

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012022, complete gene.

LocusTag

OsI_10334

Ensembl Transcript ID

BGIOSGA012022-TA

Ensembl Protein ID

BGIOSGA012022-PA

Length

2950

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5167526..5170475

Sequence Coding Region

5167526..5168639,5168852..5169029,5169108..5169416,5169489..5169609,5169687..5170475

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5167526..5170475 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5167526..5170475 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATATACTACAAAGAGGATGCACTTAAAGAAAAATGTGATATTTGTAATGAAAATCGTTATGTAGCTATTGAAGAGGAACATAAAGGGAGAAAACGGAAACCAGTGCCACGCAAAGTTATGCGTTATCTGCCATTTATACCACGATTGCAGCGGATGTACATGGAACCCGGAACAGCCAAGCATATGCGGTTTCACAAGGATGGTACTCGTGCCAATCCTAACATCATGGTACACCCATCTGATGGTGAAGCATGGAAACACTTTGATAGACACAATCCAAATTTTGCACTAGATGCTAGAAATGTTCGTCTTGCAGTAGCTACAGATGGATTCAATCCATTTGGATTTGGGGCCCAATATTCTTGTTGGCCAGTTTTTATTATACCCTTGAATTTACCCCCAGCCCTTTGTATGAAGGATGAGAACATCTTTTTAAGCTTAGTGATCCCAGGGCCAAACCATCCTGGTAAGAACTTGAATGTTTTCATGCGCCCCTTAGTTGATGAGTTCAAGCAAGCATGGCAAGGAGTAGTCACTTATGATAGTTCTGTGAAGCAGAATTTTAACATGAGGGCAGCCTACCATACTTCAATCCATGACGGTCCAGCATTGGCCATGTTCTCTGGATGGTCAACACATGGTGGTTTGTCATGTCAAGAATGTATGGCAGATATTCATACAACTTGGTTACCTAATGGGCACAAGTATAGCTGGTTTGATTGTCATAGAAGATTCCTCCCACTCAATCATCCATTTAGAGGTCAAAGGAATGCATTTAGTAAGGATACAGAAATGCATGACCTCCCTCCACGTAGATTGACAGGGGAAGAGGTCGAAGCTTACATTAAGAATACATTTGATAATTCCTTTGAAGGTTATGGGACTACACACAATTGGACTCACATGCCGATCTGGTGGGAGTTGCCATATTTCTCAACAATTCTAGTACGCCATAACATTGATGTCATGCATAATGAAAAAAATGTCGCTGAAGCTATTTGGAGTACTTGTCTTGACATTAGTGACAAGACTAAGGATAATGTGAAGGCTTGCCTTGACCAAGAATTAATGTGCAGTAGGGTTCACCTCAACCTTGTTGAGAAGCCAAATGAGGTCGATCCAACTCAAATGCTTCAGATGGAAAAATATATCCCAATTCCAATATGCAAACTCGAGAAATTATTCCCACCAGGCTTCTTTAATTATATGGAGCATCTAATCATACATCTGCCATACCAATCAAGAGTAGGAGGTCCTGTAAAGTATCGTTGGATGTATATAATTGAGAGATTTATTAAAAAACTGAAGCAAAAGGTTCGCAACAAGGCTCATGTTGAAGGGTCAATAGTGGAGGCTTATCTTGTAGAGGAGATCTCGCACTTCACATCACTGTTCTTACCTGATCTCATTGCTAGCTCACGCAATCGTCCACATCGGTATGCTATAGTTGGCCCTGCTAGTGAAAGCAACCTTAGCATGTTCCAAGTTCAAGGGTGGAAGACCGGTAGAGGAATTTCTCGAACTTTAACTTTTGAAGAACAAAAGAAAGCAATGATATACATATACACAAACATGAGTGAAATGGATGGATTTGTTGAGAAGTTTGAACAAGAACAGTGGATGCGCTCAAGACCACCAAATCAGAAGGAGCTAGATAAATTAATATGGAACGGAGCTGGTAATGGAAAACCAAACTTATTAGACTGGTTCAAAAAATTGTGTTCCAAGGACGCTAGTATACATAATGATTTGCGTCGTTTATCACGTGGATTTGGCCTAAAGGTCAAGTCATATGATATTTATGAAGTTAATGGGTATAAATTTCGGTCTGAAAAGTATGAGAAATCCAAAGGAAATCTAACTACTGTCAACACAGGGGTGCTAGCTGTTGGAATCGATGATAACACAGGCAAAGAGCTAGAGTACTATGGCATTATAATGGACATTATTGAATTGAAATTTGATGGTGATGAAAATTTCAAGCTTGTTTTATTTGATTGCCATTGGTTTCATCCTGTCAATGGAGTACGCCGTTTAGAAAAATTTGGATTAGTCGAGGTTGCACATGCATCATGCAATCCAGCGGATGAACCTTTTGTACTTGCTAGTCAAGTATCACAGGTGTATTATGTTCCATACGCATGTACAACTGATCCTAATCTCAATGCATGGTGGGTTGCATACAAAGTAAGACCCCTAGGAAGCTTGCCTATTACCTCGTTGGATGATTATAACAGCAGTGACCCATCTTGTGTTGATATCTTCCAAGAAGATGGCTTAGAAGGTGAATTCATCATAGACATTGGCCAAGGTCTGGATAATATTGTCATTACTGATGTAGATGAGATCACTGATCAACAAGACCTGTCAACAATAAATAATCGGAGTACTGATATGAGTGAAGAAAATGACCTAGTATCTGAAGATGAAGAAAGTGAAGACGACAATGAATCAATTCCTGAAATGAATGATTACTATTACCGACAAGAAGAAGCTGATGGTTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MIYYKEDALKEKCDICNENRYVAIEEEHKGRKRKPVPRKVMRYLPFIPRLQRMYMEPGTAKHMRFHKDGTRANPNIMVHPSDGEAWKHFDRHNPNFALDARNVRLAVATDGFNPFGFGAQYSCWPVFIIPLNLPPALCMKDENIFLSLVIPGPNHPGKNLNVFMRPLVDEFKQAWQGVVTYDSSVKQNFNMRAAYHTSIHDGPALAMFSGWSTHGGLSCQECMADIHTTWLPNGHKYSWFDCHRRFLPLNHPFRGQRNAFSKDTEMHDLPPRRLTGEEVEAYIKNTFDNSFEGYGTTHNWTHMPIWWELPYFSTILVRHNIDVMHNEKNVAEAIWSTCLDISDKTKDNVKACLDQELMCSRVHLNLVEKPNEVDPTQMLQMEKYIPIPICKLEKLFPPGFFNYMEHLIIHLPYQSRVGGPVKYRWMYIIERFIKKLKQKVRNKAHVEGSIVEAYLVEEISHFTSLFLPDLIASSRNRPHRYAIVGPASESNLSMFQVQGWKTGRGISRTLTFEEQKKAMIYIYTNMSEMDGFVEKFEQEQWMRSRPPNQKELDKLIWNGAGNGKPNLLDWFKKLCSKDASIHNDLRRLSRGFGLKVKSYDIYEVNGYKFRSEKYEKSKGNLTTVNTGVLAVGIDDNTGKELEYYGIIMDIIELKFDGDENFKLVLFDCHWFHPVNGVRRLEKFGLVEVAHASCNPADEPFVLASQVSQVYYVPYACTTDPNLNAWWVAYKVRPLGSLPITSLDDYNSSDPSCVDIFQEDGLEGEFIIDIGQGLDNIVITDVDEITDQQDLSTINNRSTDMSEENDLVSEDEESEDDNESIPEMNDYYYRQEEADGF</aaseq>

Gene Sequence

<dnaseqindica>1..1114#1327..1504#1583..1891#1964..2084#2162..2950#ATGATATACTACAAAGAGGATGCACTTAAAGAAAAATGTGATATTTGTAATGAAAATCGTTATGTAGCTATTGAAGAGGAACATAAAGGGAGAAAACGGAAACCAGTGCCACGCAAAGTTATGCGTTATCTGCCATTTATACCACGATTGCAGCGGATGTACATGGAACCCGGAACAGCCAAGCATATGCGGTTTCACAAGGATGGTACTCGTGCCAATCCTAACATCATGGTACACCCATCTGATGGTGAAGCATGGAAACACTTTGATAGACACAATCCAAATTTTGCACTAGATGCTAGAAATGTTCGTCTTGCAGTAGCTACAGATGGATTCAATCCATTTGGATTTGGGGCCCAATATTCTTGTTGGCCAGTTTTTATTATACCCTTGAATTTACCCCCAGCCCTTTGTATGAAGGATGAGAACATCTTTTTAAGCTTAGTGATCCCAGGGCCAAACCATCCTGGTAAGAACTTGAATGTTTTCATGCGCCCCTTAGTTGATGAGTTCAAGCAAGCATGGCAAGGAGTAGTCACTTATGATAGTTCTGTGAAGCAGAATTTTAACATGAGGGCAGCCTACCATACTTCAATCCATGACGGTCCAGCATTGGCCATGTTCTCTGGATGGTCAACACATGGTGGTTTGTCATGTCAAGAATGTATGGCAGATATTCATACAACTTGGTTACCTAATGGGCACAAGTATAGCTGGTTTGATTGTCATAGAAGATTCCTCCCACTCAATCATCCATTTAGAGGTCAAAGGAATGCATTTAGTAAGGATACAGAAATGCATGACCTCCCTCCACGTAGATTGACAGGGGAAGAGGTCGAAGCTTACATTAAGAATACATTTGATAATTCCTTTGAAGGTTATGGGACTACACACAATTGGACTCACATGCCGATCTGGTGGGAGTTGCCATATTTCTCAACAATTCTAGTACGCCATAACATTGATGTCATGCATAATGAAAAAAATGTCGCTGAAGCTATTTGGAGTACTTGTCTTGACATTAGTGACAAGACTAAGGATAATGTGAAGGCTTGCCTTGACCAAGAATTAATGTGCAGTAGGGTTCACCTCAACCTTGTTGAGAAGCCAAATGGTAAATGCGAGAAACCTAGAGCACCGTATTGCTTGACAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGACTACCATATATTTATTGAGCGGCTGCTGCCTGTGATGATCCGGGGATTTGTCAATCAGGACGTGTAGGAAGCATTAGCTGAGCTAAGCTATTTTTATAGGGTACTTTGTGCTAAAGAGGTCGATCCAACTCAAATGCTTCAGATGGAAAAATATATCCCAATTCCAATATGCAAACTCGAGAAATTATTCCCACCAGGCTTCTTTAATTATATGGAGCATCTAATCATACATCTGCCATACCAATCAAGAGTAGGAGGTCCTGTAAAGTATCGTTGGATGTATATAATTGAGAGGTAACTAAAATTCCACATGTTGTCAATTTAAAGTCATATTTTATCTTAGGTGACAAACTAACATGTCATGTTATGTAGATTTATTAAAAAACTGAAGCAAAAGGTTCGCAACAAGGCTCATGTTGAAGGGTCAATAGTGGAGGCTTATCTTGTAGAGGAGATCTCGCACTTCACATCACTGTTCTTACCTGATCTCATTGCTAGCTCACGCAATCGTCCACATCGGTATGCTATAGTTGGCCCTGCTAGTGAAAGCAACCTTAGCATGTTCCAAGTTCAAGGGTGGAAGACCGGTAGAGGAATTTCTCGAACTTTAACTTTTGAAGAACAAAAGAAAGCAATGATATACATATACACAAACATGAGTGAAATGGATGGATTTGTTGAGTAAGTATTCTAAATTTGTAAATAAGATATTAATTATGCTATAAAATGTGTTTCGTAATGCATCATTATTAGGAAGTTTGAACAAGAACAGTGGATGCGCTCAAGACCACCAAATCAGAAGGAGCTAGATAAATTAATATGGAACGGAGCTGGTAATGGAAAACCAAACTTATTAGACTGGTTCAAAAAATTGGTAACCTATCGATACACATTTACAACTTACAACTAAGATAAAGTCAGATTTTTTACTTTTTGTTTGTAATTTTGCAGTGTTCCAAGGACGCTAGTATACATAATGATTTGCGTCGTTTATCACGTGGATTTGGCCTAAAGGTCAAGTCATATGATATTTATGAAGTTAATGGGTATAAATTTCGGTCTGAAAAGTATGAGAAATCCAAAGGAAATCTAACTACTGTCAACACAGGGGTGCTAGCTGTTGGAATCGATGATAACACAGGCAAAGAGCTAGAGTACTATGGCATTATAATGGACATTATTGAATTGAAATTTGATGGTGATGAAAATTTCAAGCTTGTTTTATTTGATTGCCATTGGTTTCATCCTGTCAATGGAGTACGCCGTTTAGAAAAATTTGGATTAGTCGAGGTTGCACATGCATCATGCAATCCAGCGGATGAACCTTTTGTACTTGCTAGTCAAGTATCACAGGTGTATTATGTTCCATACGCATGTACAACTGATCCTAATCTCAATGCATGGTGGGTTGCATACAAAGTAAGACCCCTAGGAAGCTTGCCTATTACCTCGTTGGATGATTATAACAGCAGTGACCCATCTTGTGTTGATATCTTCCAAGAAGATGGCTTAGAAGGTGAATTCATCATAGACATTGGCCAAGGTCTGGATAATATTGTCATTACTGATGTAGATGAGATCACTGATCAACAAGACCTGTCAACAATAAATAATCGGAGTACTGATATGAGTGAAGAAAATGACCTAGTATCTGAAGATGAAGAAAGTGAAGACGACAATGAATCAATTCCTGAAATGAATGATTACTATTACCGACAAGAAGAAGCTGATGGTTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012022

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