BGIOSGA012043

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Revision as of 09:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012043| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012043, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA012043

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012043, complete gene.

LocusTag

OSJNBA0064E16.4

Ensembl Transcript ID

BGIOSGA012043-TA

Ensembl Protein ID

BGIOSGA012043-PA

Length

3716

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5439879..5443594

Sequence Coding Region

5439879..5440226,5440349..5440397,5440492..5440699,5440820..5440994,5441101..5441166
,5441270..5441383,5441486..5441602,5441709..5441835,5441947..5442233
,5442330..5442520,5443058..5443143,5443238..5443314,5443451..5443594

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5439879..5443594 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5439879..5443594 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGAGCCGTGTCCGACGGGGGCGAGGCCATCGACGCCGACATCGCCAGCCGGACGTCATCGCACAGCCACATGGACGGCGGCCATCATCATCATCATCACGGCCACAAGGTCGAGTTCCCACCGAAGAAGAAGCTCATCGACGAGTTCACCGACGCCGTGAAGGAGACGTTCTTCGCCGACGACCCGTTGCGGCAGTACAAGGACCAGCCGATGTCAAAGAAGGTGTTGATCAGCCTGCAAAACTTCTTCCCGGTGCTGGACTGGGGCCGGCACTACACCTTCCGCAAGTTCAGGGGCGACCTCGTCTCCGGCCTCACCATTGCCAGCCTCTGCATACCCCAGGACATCGGTTATGCGAAGCTTGCTGGCCTATTACCAAATTATGGACTGTACAGCAGCTTCGTACCGCCTTTGATATACGCGATGATGGGAAGTTCCAGGGATATAGCCATTGGTCCAGTGGCCGTCGTTTCGCTGCTGCTTGGCACTCTCCTCCAGAATGAGTTTGATCCCAAGAAGAATCAGGAAGAGTACACCCGGCTGGCCTTCACTGCAACGTTCTTCGCTGGGGTCACCCAGGCAGTGCTCGGATTCCTCAGGCTAGGGTTTATCATAGAGTTCTTGTCCCATGCTGCCATCGTTGGATTCATGGCGGGAGCGGCCATCACCATTGCCCTTCAGCAGCTTAAAGGCTTCCTTGGAATTGCAAACTTCACCAAGAAGACTGACATCATCTCGGTCATGAAATCAGTCTGGGGAAATGTTCACCATGGGTGGAACTGGCAGACGATATTGATCGGAGCATCCTTCCTGACATTCCTCCTGGTTGCAAAATACATTGCAAAGAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTGCACCACTCACTTCGGTGATCATATCCACCCTTTTTGTCTATATCACTCGAGCAGACAAGCATGGTGTCGTGATTGTCAAGTACATAAAGAAAGGCATCAATCCACCTTCAGCTAGTCTCATATACTTCAGTGGCCCAAACCTGATGAAAGGATTCAGAATAGGAGTAATAGCTGGCATGATAGGCCTAACAGAAGCAATTGCAATAGGAAGAACATTCGCTGGCCTGAAGGACTACAAGATTGACGGAAACAAGGAAATGGTTGCTCTAGGAACAATGAACATTGTTGGTTCAATGACTTCTTGCTACGTAGCTACAGGTTCTTTCTCGCGGTCAGCAGTCAATTACATGGCTGGCTGCCAAACAGCGGTATCCAATATTGTTATGTCAATTGTAGTACTGCTCACACTGGAGCTGATTACTCCATTGTTCAAGTATACGCCCAATGCCATCCTTTCTTCCATCATCATATCAGCAGTGCTTGGCTTAGTCGACTACCACACAGCATACCTTATCTGGAAGGTTGATAAACTTGACTTTCTGGCATGCTTAGGAGCATTCTTTGGCGTCATATTTTCATCAGTGGAGTATGGTCTGCTAATTGCGGTTGCGATCTCACTCGCTAAAATTCTTCTACAAGTTACACGACCCAGAACAGTTTTGCTTGGTAACCTTCCAAGAACAACATTATATAGGAATATCGACCAGTATCCAGAAGCTACCTTGGTACCAGGAGTGGTAATAGTTAGGGTGGACTCAGCTATCTACTTCACAAACTCGAACTATGTTAAAGACAGAATCCTGAGGTGGCTGAGGGACGAGGAAGAACGTCAGCAGGAACAGAAGCTACAGAAAACTGAGTTTCTGATTGTTGAGCTATCTCCGGTAATTGACATTGATACAAGTGGAATCCATGCCTTGGAGGATCTATTTAGAGCACTTGAAAAGCGCAAAATCCAGCTGATTCTAGCCAATCCGGGGCCAGCTGTGATCCTGAAGCTCCGATCAGCGAAATTCACGGATCTCATCGGTGAAGACAAGATATTCCTGACTGTCGGGGACGCAGTGAAGAAATTTGCTCCTAAGGCAGTAGAGAATGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MPRAVSDGGEAIDADIASRTSSHSHMDGGHHHHHHGHKVEFPPKKKLIDEFTDAVKETFFADDPLRQYKDQPMSKKVLISLQNFFPVLDWGRHYTFRKFRGDLVSGLTIASLCIPQDIGYAKLAGLLPNYGLYSSFVPPLIYAMMGSSRDIAIGPVAVVSLLLGTLLQNEFDPKKNQEEYTRLAFTATFFAGVTQAVLGFLRLGFIIEFLSHAAIVGFMAGAAITIALQQLKGFLGIANFTKKTDIISVMKSVWGNVHHGWNWQTILIGASFLTFLLVAKYIAKKNKKLFWVAAIAPLTSVIISTLFVYITRADKHGVVIVKYIKKGINPPSASLIYFSGPNLMKGFRIGVIAGMIGLTEAIAIGRTFAGLKDYKIDGNKEMVALGTMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLELITPLFKYTPNAILSSIIISAVLGLVDYHTAYLIWKVDKLDFLACLGAFFGVIFSSVEYGLLIAVAISLAKILLQVTRPRTVLLGNLPRTTLYRNIDQYPEATLVPGVVIVRVDSAIYFTNSNYVKDRILRWLRDEEERQQEQKLQKTEFLIVELSPVIDIDTSGIHALEDLFRALEKRKIQLILANPGPAVILKLRSAKFTDLIGEDKIFLTVGDAVKKFAPKAVENV</aaseq>

Gene Sequence

<dnaseqindica>1..348#471..519#614..821#942..1116#1223..1288#1392..1505#1608..1724#1831..1957#2069..2355#2452..2642#3180..3265#3360..3436#3573..3716#ATGCCGCGAGCCGTGTCCGACGGGGGCGAGGCCATCGACGCCGACATCGCCAGCCGGACGTCATCGCACAGCCACATGGACGGCGGCCATCATCATCATCATCACGGCCACAAGGTCGAGTTCCCACCGAAGAAGAAGCTCATCGACGAGTTCACCGACGCCGTGAAGGAGACGTTCTTCGCCGACGACCCGTTGCGGCAGTACAAGGACCAGCCGATGTCAAAGAAGGTGTTGATCAGCCTGCAAAACTTCTTCCCGGTGCTGGACTGGGGCCGGCACTACACCTTCCGCAAGTTCAGGGGCGACCTCGTCTCCGGCCTCACCATTGCCAGCCTCTGCATACCCCAGGTTTGTGCCTGACGATCAAACACCATCTTGCACGCACAGCAGCGACCTGAATAGCACAGCTCCTGCATGAAAATTGCATACAATCTTCGTCATCAACCCTGACATTGCAACACTTCATCCAGGACATCGGTTATGCGAAGCTTGCTGGCCTATTACCAAATTATGGACTGTGTAAGTGCACAGAATTCACTTACTAGTATTTGTATAGGGTGTGCTCGAGTGATAGTCCAGCCAGTGGTCTAACTGAAATCTGCTGATTTTTCAGACAGCAGCTTCGTACCGCCTTTGATATACGCGATGATGGGAAGTTCCAGGGATATAGCCATTGGTCCAGTGGCCGTCGTTTCGCTGCTGCTTGGCACTCTCCTCCAGAATGAGTTTGATCCCAAGAAGAATCAGGAAGAGTACACCCGGCTGGCCTTCACTGCAACGTTCTTCGCTGGGGTCACCCAGGCAGTGCTCGGATTCCTCAGGTGAGTGGCTACCTGCAAAGTGATCATTGTTAAGCAGTCAGTTCTTAGATATGCAGTTCTGCCCTCTTGGGTTCTTAGAGTGGACAGTTTACCATAGAGTGAGATTGTACTCTGCTGCAGGCTAGGGTTTATCATAGAGTTCTTGTCCCATGCTGCCATCGTTGGATTCATGGCGGGAGCGGCCATCACCATTGCCCTTCAGCAGCTTAAAGGCTTCCTTGGAATTGCAAACTTCACCAAGAAGACTGACATCATCTCGGTCATGAAATCAGTCTGGGGAAATGTTCACCATGGGGTAGGACAAAATAATATCATTCCTTTAAGAACTTATTGCTTCTTCATCATTCTTTGATGGAAACCAGTATTGGGTACAACTGATGCTAGCTTGGTTGCTGCTGCAGTGGAACTGGCAGACGATATTGATCGGAGCATCCTTCCTGACATTCCTCCTGGTTGCAAAATACATTGTAAGATAAACTATACTAAATGTTCAGATTTTGATCTTGGATATCCTTGTTAGGGAAAACGTTTACTGGTTCTCATAATCACAGTTTCATTTGGGCATTTCAGGCAAAGAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTGCACCACTCACTTCGGTGATCATATCCACCCTTTTTGTCTATATCACTCGAGCAGACAAGCATGGTGTCGTGATTGTAAGTCAATCTTGACAGCTCGTAACCCTTTCCATTAGGAAAAGAAACAAAATTATGAAACAAATCAAAGCTAATATGAAGTATGTTACTGATTAATTGCAGGTCAAGTACATAAAGAAAGGCATCAATCCACCTTCAGCTAGTCTCATATACTTCAGTGGCCCAAACCTGATGAAAGGATTCAGAATAGGAGTAATAGCTGGCATGATAGGCCTAACAGTAATGCAAACTTCACCATCTTAAAGATTAAAAATTTGTTGCATGGAAAGGTACTATTCACAAGACAGTGCAGTGTTCACTGATCAATTGCTGCTAACTTTATCAGGAAGCAATTGCAATAGGAAGAACATTCGCTGGCCTGAAGGACTACAAGATTGACGGAAACAAGGAAATGGTTGCTCTAGGAACAATGAACATTGTTGGTTCAATGACTTCTTGCTACGTAGCTACAGGTAACCGTTAATTCAGCCAAAAAAAAATTAGACCAAGTAATTCAGCCAAAATAACTCATAGCCCATACATATATACCATTCTCGTGACCCTTTTTTCTCCCTTATGTACAGGTTCTTTCTCGCGGTCAGCAGTCAATTACATGGCTGGCTGCCAAACAGCGGTATCCAATATTGTTATGTCAATTGTAGTACTGCTCACACTGGAGCTGATTACTCCATTGTTCAAGTATACGCCCAATGCCATCCTTTCTTCCATCATCATATCAGCAGTGCTTGGCTTAGTCGACTACCACACAGCATACCTTATCTGGAAGGTTGATAAACTTGACTTTCTGGCATGCTTAGGAGCATTCTTTGGCGTCATATTTTCATCAGTGGAGTATGGTCTGCTAATTGCGGTGCGGTTTGCAATCAACTCTGTCCTATACTTACAATTAAGCTCCTTGTAACAGTAAACATAAGGGCTGATGGTACTTGAATTTGTTTTGGAACAGGTTGCGATCTCACTCGCTAAAATTCTTCTACAAGTTACACGACCCAGAACAGTTTTGCTTGGTAACCTTCCAAGAACAACATTATATAGGAATATCGACCAGTATCCAGAAGCTACCTTGGTACCAGGAGTGGTAATAGTTAGGGTGGACTCAGCTATCTACTTCACAAACTCGAACTATGTTAAAGACAGGTATAAGTTCAAAACTGGTGGGTTTTTTTCTCAGTTGCTAGTATGACTGCAGTGCTATTTAATACTCCCTCCATTTTTATTTAAATGATGTTGGTTAGTCCAATTTGAACTAACCAACATCAAATAAAAAAACAGAGGTAGTATTATAAAATTCTCAGGACGGTTTATCTCCAGTTAGTTTTATTTGATAGAGCTTGTCCAGGAAATATGAGATTAACCATGCTTTTTAGGTACGCATCAATAATCTGAGTTGACATTTGCAAGTAGAGAAAAGAAGAGTTGGAAATAAACTAAGCAAATACTGTTCAGTTTCTGCTCTGACTCACTTTATTTTATTACGAGATGTTCATGAATAAACTACATCGATTTGTTATTAACATTCATGTTCATCCTTTCCTACTGATTACTATTCTTTGGGTGGGACTTTAAATCTGCTACTGAATTCAGAAATCAACTCTACCTAAAAAACGTAAGACTACATGTGCAAGTGCCTTGTGCATTTCGCATTATTCAATGTTTCATATTATCTGATTTCAGAATCCTGAGGTGGCTGAGGGACGAGGAAGAACGTCAGCAGGAACAGAAGCTACAGAAAACTGAGTTTCTGATTGTTGAGCTATCTCGTAAGGGCATAGTGTATTTATTTCTGCAAATAATAGTTGAGATCACTACTGATATGGAGTTATTGGCTAACAAACTGATCTAATTCTTCAACAGCGGTAATTGACATTGATACAAGTGGAATCCATGCCTTGGAGGATCTATTTAGAGCACTTGAAAAGCGCAAAATCCAGGTAAAACACCAAAACTAGTGTCAACCAGTGTAAAGATTTTACAGCCATTAGCACTGATCCTTGTACAGTAATACTGTTCATATAAGAAATCCTTAGTTAAGGTAGTAATATTAAAATCCACGTGCTTGACTTACAGCTGATTCTAGCCAATCCGGGGCCAGCTGTGATCCTGAAGCTCCGATCAGCGAAATTCACGGATCTCATCGGTGAAGACAAGATATTCCTGACTGTCGGGGACGCAGTGAAGAAATTTGCTCCTAAGGCAGTAGAGAATGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012043

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