BGIOSGA012044

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Revision as of 09:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012044| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012044, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA012044

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012044, complete gene.

LocusTag

OSJNBA0064E16.3

Ensembl Transcript ID

BGIOSGA012044-TA

Ensembl Protein ID

BGIOSGA012044-PA

Length

3410

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5449954..5453363

Sequence Coding Region

5449954..5450274,5450399..5450447,5450564..5450950,5451036..5451094,5451188..5451301
,5451404..5451520,5451618..5451744,5451824..5452110,5452208..5452398
,5452860..5452945,5453034..5453110,5453220..5453363

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5449954..5453363 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5449954..5453363 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGAGCCGTGTCCGACGGTGCCGACAACCTCGACGCCGACATGGACAACGGCGCCGCGCAGCAGCAGCACGACGGCTACAATGTCGGCGCGCCGCCGAAGAAGAACCTCCTGGCGGAGTTCGCCGGCACGGTGAAGGAGACGTTCTTCTCCGACGAGCCGATGCGGCGGTACAAGGACCAGCCGAGGTCCAGGAAGCTGTGGCTCGCCCTGCAGCACGTCTTCCCGGTGTTCGAATGGGGCAGACAATACACCCTCGCCAAGTTCAAGGGCGACCTCATTGCCGGCCTCACCCTTGCCAGCCTCGTCATACCTCAGGACATCGGCTACGCGAAGCTTGCTAACCTGCCACCAGAGATTGGGCTGCACAGTAGCTTCGTCCCGCCATTGATATACGCTCTGATGGGCACCTCAAGGGAGCTAGCAATGGGTCCAGTGGCCGTCATCTCACTGCTGCTTGGTACTCTCCTCCAGGAGGAGATTGACTCAAAGAAGAACCCGCTAGATTACAGACGGCTCGCCTTCACAGCGACCTTCTTTGCAGGAGTCACACAGGCGGCGCTTGGTTTCTGCAGGCTAGGGTTCATCATAGCGTTCCTGTCTCATGCTGCCATCATCGGATTCATGGCCGGCGCCGCCATCACCATTGCTCTTCAGCAGCTTAAAGGCTTCCTTGGAATTGCAAACTTCACCAAGAAGACTGACATCATCTCGGTCATGAAATCAGTCTGGGGAAATGTTCACCATGGGGCAATGGAACTGGCAGACAATATTGATCGGAGCATCATTTTTGGCATTCCTCCTGGTTGCCAAGGCAAGAAGAACAAGAAGCTCTTCTGGGTCCCAGCAATTGCACCACTCATTTCGGTGATCATTTCAACTTTGTTCGTCTACATCACTCGTGCTGACAAACAAGGCGTCGCAATTGTAAAAAACGTCAAGAAAGGCATCAATCCACCTTCAGCTAGCCTGATATTTTTCACTGGCCCATACTTGCTCAAAGGATTCAAAATTGGAGTAGTAGCTGGAATGATAAGCCTTACGGAAGCGATTGCAGTTGGAAGAACATTTGCTGGATTGAACGATTACCAGATAGATGGGAACAAAGAAATGTTGGCTCTAGGAACCATGAATGTGGTCGGTTCAATGACGTCTTGCTATATAGCCACAGGTGGTTTTGCACGATCAGCAGTCAATTGCATGGCTGGAGGTAAAACACCAATGTCCAATATTGTTATGTCAACTGTAGTATTGCTTGCACTCCTGTGGATCACTCCATTGTTCAAGTACACGCCCAATGCCACCATTTCTTCCATCATCATATCAGCAGTGCTTGGCCTATTTGACTTTGAATCAGCCTACCTTATCTGGAAGGTTGATAAGTTGGACTTCATGGCGTGCTTGGGGGCATTCCTTGGAGTAATATTTTCATCTGTGGAGTATGGCTTGCTCATTGCGGTTGTAATATCACTAATCAAAGTTCTGCTCCATGTAACACGGCCAAGGACAGCTTTACTTGGCAACCTTCCAAGAACGATTATCTATAGAAATGTTGAACAATATCCAGAAGCTACCAAGGTGCCAGGGATGCTAATTGTAAGAGTGGACTCAGCAATATACTTCACAAACTCCAATTATGTTAAAGAAAGAATGCTGAGATGGCTGAGAGATGAGGAAGAACATCAAAAGGAACAGAAGTTACCAAAAATTGAGTTTCTGATTGTTGACCTATCTCCTGTAAATGATATTGACACAAGTGGAATCCATGCCTTCAAAGAGTTGTTGAGGACACTTGAAAAGCGCCAGATTCAGCTGATTTTCGCCAATCCTGGGGCGGCTGTGATCCAAAAGCTCCGGTCAGCAAAATTCACAGAGCTCATTGGTGAAGAAAAGATATGCCTGACAGTTGGTGACGCCGTAAAGAAATTTGCTCCCCAGTTGACTGAGAATGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MPRAVSDGADNLDADMDNGAAQQQHDGYNVGAPPKKNLLAEFAGTVKETFFSDEPMRRYKDQPRSRKLWLALQHVFPVFEWGRQYTLAKFKGDLIAGLTLASLVIPQDIGYAKLANLPPEIGLHSSFVPPLIYALMGTSRELAMGPVAVISLLLGTLLQEEIDSKKNPLDYRRLAFTATFFAGVTQAALGFCRLGFIIAFLSHAAIIGFMAGAAITIALQQLKGFLGIANFTKKTDIISVMKSVWGNVHHGAMELADNIDRSIIFGIPPGCQGKKNKKLFWVPAIAPLISVIISTLFVYITRADKQGVAIVKNVKKGINPPSASLIFFTGPYLLKGFKIGVVAGMISLTEAIAVGRTFAGLNDYQIDGNKEMLALGTMNVVGSMTSCYIATGGFARSAVNCMAGGKTPMSNIVMSTVVLLALLWITPLFKYTPNATISSIIISAVLGLFDFESAYLIWKVDKLDFMACLGAFLGVIFSSVEYGLLIAVVISLIKVLLHVTRPRTALLGNLPRTIIYRNVEQYPEATKVPGMLIVRVDSAIYFTNSNYVKERMLRWLRDEEEHQKEQKLPKIEFLIVDLSPVNDIDTSGIHAFKELLRTLEKRQIQLIFANPGAAVIQKLRSAKFTELIGEEKICLTVGDAVKKFAPQLTENV</aaseq>

Gene Sequence

<dnaseqindica>1..321#446..494#611..997#1083..1141#1235..1348#1451..1567#1665..1791#1871..2157#2255..2445#2907..2992#3081..3157#3267..3410#ATGCCGCGAGCCGTGTCCGACGGTGCCGACAACCTCGACGCCGACATGGACAACGGCGCCGCGCAGCAGCAGCACGACGGCTACAATGTCGGCGCGCCGCCGAAGAAGAACCTCCTGGCGGAGTTCGCCGGCACGGTGAAGGAGACGTTCTTCTCCGACGAGCCGATGCGGCGGTACAAGGACCAGCCGAGGTCCAGGAAGCTGTGGCTCGCCCTGCAGCACGTCTTCCCGGTGTTCGAATGGGGCAGACAATACACCCTCGCCAAGTTCAAGGGCGACCTCATTGCCGGCCTCACCCTTGCCAGCCTCGTCATACCTCAGGTGCATTACTGAGCTGAGATTTACCACTATCACTGACAACCAACAGTGATTCTCAACAGTGATAGCATTTTCTGCATTAGTGAGCATCTTTCATCTCTAACTAATGGACGATATCTTGAACCAGGACATCGGCTACGCGAAGCTTGCTAACCTGCCACCAGAGATTGGGCTGCGTAAGTGCAATGCAATCAAAACATCTTCGTGCTACTTGAAAATCTTTACTACACTGTGATGCGATCATTTCTTCAGGAGCTAATTGAACTGAGATGTGGTGGTTCTCTTTTGGCAGACAGTAGCTTCGTCCCGCCATTGATATACGCTCTGATGGGCACCTCAAGGGAGCTAGCAATGGGTCCAGTGGCCGTCATCTCACTGCTGCTTGGTACTCTCCTCCAGGAGGAGATTGACTCAAAGAAGAACCCGCTAGATTACAGACGGCTCGCCTTCACAGCGACCTTCTTTGCAGGAGTCACACAGGCGGCGCTTGGTTTCTGCAGGCTAGGGTTCATCATAGCGTTCCTGTCTCATGCTGCCATCATCGGATTCATGGCCGGCGCCGCCATCACCATTGCTCTTCAGCAGCTTAAAGGCTTCCTTGGAATTGCAAACTTCACCAAGAAGACTGACATCATCTCGGTCATGAAATCAGTCTGGGGAAATGTTCACCATGGGGCAAGTATTTTTGTACCTCTCCAACTTCTTGATCTCTTCTCTGAAAAAGGGTAGTGTTTGAGATAACTCATGGTTGGTTGTTGCTGCAGTGGAACTGGCAGACAATATTGATCGGAGCATCATTTTTGGCATTCCTCCTGGTTGCCAAGTACATCGTAAGACAAAATTACATAACGATTTAGTGTTACCTTGACTATTGTTGATGAACTGATGATCACACTTGTCCACTGGGATTATTCAGGGCAAGAAGAACAAGAAGCTCTTCTGGGTCCCAGCAATTGCACCACTCATTTCGGTGATCATTTCAACTTTGTTCGTCTACATCACTCGTGCTGACAAACAAGGCGTCGCAATTGTGAGTTCTCATTCACAACTTGATCTTTGCCATTAGAAAAGCCAAGCAATTGTGCTGTATTTCCAGATAAGTTGAAGTGGAGGTTGTCCAAATAAACTGCAGGTAAAAAACGTCAAGAAAGGCATCAATCCACCTTCAGCTAGCCTGATATTTTTCACTGGCCCATACTTGCTCAAAGGATTCAAAATTGGAGTAGTAGCTGGAATGATAAGCCTTACGGTAAACTGCATTATTTCCTTTTAGTTTAAAAACTGTAGCATGAAAGCACTCTAAAATAGCAATGTGCTGAATTGTCAACCGATGCAAACATTGTTAGGAAGCGATTGCAGTTGGAAGAACATTTGCTGGATTGAACGATTACCAGATAGATGGGAACAAAGAAATGTTGGCTCTAGGAACCATGAATGTGGTCGGTTCAATGACGTCTTGCTATATAGCCACAGGTAAGTGCTGATTCAGCATAAAACAACTAACTATCAAGAGCATATTAGCATTCTTTGTTATTGAAGTAGTTTCCTGCAGGTGGTTTTGCACGATCAGCAGTCAATTGCATGGCTGGAGGTAAAACACCAATGTCCAATATTGTTATGTCAACTGTAGTATTGCTTGCACTCCTGTGGATCACTCCATTGTTCAAGTACACGCCCAATGCCACCATTTCTTCCATCATCATATCAGCAGTGCTTGGCCTATTTGACTTTGAATCAGCCTACCTTATCTGGAAGGTTGATAAGTTGGACTTCATGGCGTGCTTGGGGGCATTCCTTGGAGTAATATTTTCATCTGTGGAGTATGGCTTGCTCATTGCGGTGTGAATTTCTGACTGTTTCTGTCAGGTCGCTTACAGCCGAACACCTTGTACGATAGACAAATGGCTGATGATTGTTGCACTTGTTTGTGGAATAGGTTGTAATATCACTAATCAAAGTTCTGCTCCATGTAACACGGCCAAGGACAGCTTTACTTGGCAACCTTCCAAGAACGATTATCTATAGAAATGTTGAACAATATCCAGAAGCTACCAAGGTGCCAGGGATGCTAATTGTAAGAGTGGACTCAGCAATATACTTCACAAACTCCAATTATGTTAAAGAAAGGTAAAATGTCCCCAAGTTCAGAATTATGGTATTTTACTAAGTTAGTAGTTTTTATATTAGATTTTTTTTGGTCAATTGTATTCTGATTATAAATATTTAAAAAATAATTACCTGGATATGGTAATCAGTTTATCACCACTGTTGTGTTTTTATACAAACTTCTTTTCTCCTCTCTCTGCTTTTTTTTCGGGGGGAGGGGGGATGTAGACAATCCATTTTCAGTTGCTACCAGAACAAAAGCAAAAGTCAACTCACCCTTAAAAGAGAAATATTGCATGAGAAGATCCTCTGGAATAAAGTCAAATCATGGCTGTGTGTGAAAGCCCCTTGTGTCATAAATATTCTAATACCATAAGATCACATCCGATATATCATTGTGTTATCTTCAGTATTCTAGCAACATGTTGCAATCTCAGAAATAATTATAAGAAAACAATGCTTAACTTGCTATCCAATTTCAGAATGCTGAGATGGCTGAGAGATGAGGAAGAACATCAAAAGGAACAGAAGTTACCAAAAATTGAGTTTCTGATTGTTGACCTATCTCGTAAGAACTGTATTATTTTTTTCTATACAACATATTGCTGATTTGTTTTACTGAGTTACGGCTGCTGGCTTTTCTAACTCTTTAACAGCTGTAAATGATATTGACACAAGTGGAATCCATGCCTTCAAAGAGTTGTTGAGGACACTTGAAAAGCGCCAGATTCAGGTAAAAAGGAAAACTTAAATTTCTAGCGATACAGAACTAAATGAGCTATTAGAAGAATATTCACATTAGGAATGTACACTAAGAAGAAAACCCATGTCTGTACTTACAGCTGATTTTCGCCAATCCTGGGGCGGCTGTGATCCAAAAGCTCCGGTCAGCAAAATTCACAGAGCTCATTGGTGAAGAAAAGATATGCCTGACAGTTGGTGACGCCGTAAAGAAATTTGCTCCCCAGTTGACTGAGAATGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012044