BGIOSGA012069

From RiceWiki
Revision as of 09:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012069| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012069, complete gene.| tag = OS03G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012069

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012069, complete gene.

LocusTag

OS03G0203700

Ensembl Transcript ID

BGIOSGA012069-TA

Ensembl Protein ID

BGIOSGA012069-PA

Length

3901

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5909401..5913301

Sequence Coding Region

5909401..5909482,5909587..5911562,5911623..5911781,5911995..5912166,5912531..5912829
,5913056..5913301

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5909401..5913301 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5909401..5913301 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACATTTTTCTGTACCGATTTCAGGAGAAGCTGCGAGTTGCTGTGCTAGTGTCAAAGGCTGCACTTCAGTTCATCCAAGGACTTGCTCCGGCGAGCGAGTACACGGTCCCCGACGACGTCAAGGCGGCGGGCTACGGCATCTGCGCCGAGGAGCTGAGCTCCATCGTGGAGAGCCACGACATCAAGAAGCTCAAGTCCCATGGCGGCGTGGAGGCCATCGCGGCGAAGCTGTGCACCTCGCCGGAGGACGGGCTCCCGAAGTCGAGGCGCCGGCAAGCCGTCCGGGAGGAGCTGTTCGGCATCAACAGGTTCGCCGAGACGGAGTCGCGCAGCTTCTGGGTGTTCGTCTGGGAGGCGCTCCAGGACATGACGCTGATGATCCTCGCGGCGTGCGCCTTCTTCTCCCTCGTCGTCGGCATCGCCACCGAGGGGTGGCCCAAGGGCGCGCACGACGGGCTCGGCATCGTGGCCAGCATCCTTCTCGTCGTCTTCGTCACGGCGACCAGCGACTACCGGCAGTCGCTGCAGTTCAAGGACCTCGACAAGGAGAAGAAGAAGATCACGGTGCAGGTCTCCCGGAACGGGTACAGGCAGAAGCTGTCCATCTACGACCTCCTCGCCGGCGACATCGTGCACCTCTCCATCGGCGACCAGGTGCCCGCCGATGGCTTGTTCCTGTCCGGATTCTCGCTGCTCATCAACGAGTCGAGCCTGACCGGGGAGAGCGAGCCCGTCGCCGTCAATGCCGAGAACCCGTTCCTCCTGTCGGGGACCAAGGTGCAGGATGGTTCTTGCAAGATGCTCGTCACGACGGTCGGGATGAGGACGCAGTGGGGTAAGCTGATGGCCACGCTGAGCGAGGGCGGCGACGATGAGACGCCGTTGCAGGTGAAGCTCAACGGCGTCGCCACCATCATCGGCAAGATCGGCCTCATCTTCGCAGTCGTCACGTTCGCCGTGCTCACCGAGGGCCTCTTCCGGCGCAAGATCATGGACGCCTCGTACCTGAGCTGGACCGGAGACGACGCGATGGAGCTGCTCGAGTTCTTCGCCATCGCCGTCACCATCGTCGTCGTGGCCGTCCCCGAAGGCCTCCCGCTCGCCGTGACGCTCAGCCTCGCGTTCGCCATGAAGAAGATGATGAACGACAAGGCGCTCGTCCGGCACCTCGCCGCCTGCGAGACCATGGGCTCGGCGACCACCATCTGCAGCGACAAGACCGGCACGCTCACGACCAACCACATGACCGTCGTCAAGGCCTGCATCTGCGGCAAGATCAAAGACGTGGAGAGCGCCTCGGACACCAAGAGCTTGTTCTCCGAGCTGCCGGAGTCCGCCATGACGCTGCTCTCGCAGTCCATCTTCAACAACACCGGCGGCGACGTCGTCTTCAACAAGAGCGGGAGTCGCGAGATACTTGGCACACCAACCGAGACGGCCATCCTCGAGTTCGGCCTCTCACTCGGCGGCGACTTCCTGGCCGTGCGCAAGGCGAGCACCCTCGTCAAGGTGGAGCCATTCAACTCGGCCAAGAAGAGAATGGGAGTGGTCATCCAGCTCCCCGGAGGAGCAATGCGTGCACACAGCAAGGGCGCGTCAGAGATCATCTTGGCATCTTGCAGCAAGTACCTGAATGATCAAGGCAACGTCGTGCCACTCGACGATGCAACCGTTGCTCACCTGAACGCCACGATCAACAGCTTTGCAAACGAGGCGCTCCGTACCTTGTGCCTTGCCTACGTCGATGTCGGTGACGGGTTCTCGGCGAATGACCAGATTCCTGAAGATGGCTACACCTGCATTGGCATTGTGGGGATCAAAGATCCAGTTCGTCCTGGTGTGAAGGAATCGGTTGCCATCTGCAGGTCGGCAGGGATCATGGTGAGGATGGTCACAGGTGACAACATCAATACAGCGAAGGCGATTGCGCGGGAATGCGGCATTTTGACTGAAGGTGGCATTGCCATTGAAGGACCGGATTTCAGAACCAAGAGTGCAGAGGAACTGAATGAGTTGATACCAAAAATACAAGTAAAGTTTTCGTTGCTTTTGCTGGTGATGGCTAGATCTTCACCACTTGACAAGCACACCTTGGTGAAGCATCTCCGGACCACTTTTGATGAAGTTGTTGCGGTTACTGGTGATGGCACAAATGATGCTCCTGCTCTTCATGAAGCTGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTGGCAAAAGAAAGTGCTGACGTGATTATTCTTGACGACAACTTCTCCACTATAGTCACTGTTGCTAAATGGGGTCGGTCAGTGTACATTAATATTCAGAAGTTTGTGCAGTTTCAGCTGACAGTCAATGTGGTCGCTCTGATAGTGAACTTCTCCTCAGCTTGCTTGACAGGGAGTGCTCCTCTTACTGCTGTCCAACTGCTCTGGGTTAACATGATCATGGACACACTAGGAGCACTGGCATTGGCAACTGAACCTCCAAACGATGAACTGATGAAGAGAACTCCTGTTGGAAGGAAAGGGAACTTCATCAGCAACATTATGTGGAGAAACATCCTGGGACAGGCCTTCTACCAATTCATTGTAATATGGTATCTGCAGACAGAAGGGAAGTGGCTATTTGGACTAAAGGGAGAAAATTCCGATCTAGTCTTGAACACACTCATCTTCAATTGCTTTGTGTTCTGCCAGGTGTTCAATGAGGTGAGCTCAAGGGAGATGGAGAGGATAAATGTATTTGAAGGCATTCTAGACAACAACGTGTTCGTCGCCGTCCTCGGCAGCACAGTCATCTTCCAGTTCATAATAGTACAGTTCCTGGGTGATTTCGCCAACACGACTCCTCTCACATTGAAGCAGTGGTTCAACTGCATTTTCATCGGTTTCATAGGGATGCCGATCGCTGCTGCGGTCAAGCTGATCCCAGTTGATTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MHIFLYRFQEKLRVAVLVSKAALQFIQGLAPASEYTVPDDVKAAGYGICAEELSSIVESHDIKKLKSHGGVEAIAAKLCTSPEDGLPKSRRRQAVREELFGINRFAETESRSFWVFVWEALQDMTLMILAACAFFSLVVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITVQVSRNGYRQKLSIYDLLAGDIVHLSIGDQVPADGLFLSGFSLLINESSLTGESEPVAVNAENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLIFAVVTFAVLTEGLFRRKIMDASYLSWTGDDAMELLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKDVESASDTKSLFSELPESAMTLLSQSIFNNTGGDVVFNKSGSREILGTPTETAILEFGLSLGGDFLAVRKASTLVKVEPFNSAKKRMGVVIQLPGGAMRAHSKGASEIILASCSKYLNDQGNVVPLDDATVAHLNATINSFANEALRTLCLAYVDVGDGFSANDQIPEDGYTCIGIVGIKDPVRPGVKESVAICRSAGIMVRMVTGDNINTAKAIARECGILTEGGIAIEGPDFRTKSAEELNELIPKIQVKFSLLLLVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRTPVGRKGNFISNIMWRNILGQAFYQFIVIWYLQTEGKWLFGLKGENSDLVLNTLIFNCFVFCQVFNEVSSREMERINVFEGILDNNVFVAVLGSTVIFQFIIVQFLGDFANTTPLTLKQWFNCIFIGFIGMPIAAAVKLIPVDF</aaseq>

Gene Sequence

<dnaseqindica>1..82#187..2162#2223..2381#2595..2766#3131..3429#3656..3901#ATGCACATTTTTCTGTACCGATTTCAGGAGAAGCTGCGAGTTGCTGTGCTAGTGTCAAAGGCTGCACTTCAGTTCATCCAAGGTATGAACGATACTGATACCAGTTCACAATCACATCCCAGAATGAAATCAACATTTTTTCTCTTTTCCATGGAGCCCAATCATGACATTGGCACGATCCTGCAGGACTTGCTCCGGCGAGCGAGTACACGGTCCCCGACGACGTCAAGGCGGCGGGCTACGGCATCTGCGCCGAGGAGCTGAGCTCCATCGTGGAGAGCCACGACATCAAGAAGCTCAAGTCCCATGGCGGCGTGGAGGCCATCGCGGCGAAGCTGTGCACCTCGCCGGAGGACGGGCTCCCGAAGTCGAGGCGCCGGCAAGCCGTCCGGGAGGAGCTGTTCGGCATCAACAGGTTCGCCGAGACGGAGTCGCGCAGCTTCTGGGTGTTCGTCTGGGAGGCGCTCCAGGACATGACGCTGATGATCCTCGCGGCGTGCGCCTTCTTCTCCCTCGTCGTCGGCATCGCCACCGAGGGGTGGCCCAAGGGCGCGCACGACGGGCTCGGCATCGTGGCCAGCATCCTTCTCGTCGTCTTCGTCACGGCGACCAGCGACTACCGGCAGTCGCTGCAGTTCAAGGACCTCGACAAGGAGAAGAAGAAGATCACGGTGCAGGTCTCCCGGAACGGGTACAGGCAGAAGCTGTCCATCTACGACCTCCTCGCCGGCGACATCGTGCACCTCTCCATCGGCGACCAGGTGCCCGCCGATGGCTTGTTCCTGTCCGGATTCTCGCTGCTCATCAACGAGTCGAGCCTGACCGGGGAGAGCGAGCCCGTCGCCGTCAATGCCGAGAACCCGTTCCTCCTGTCGGGGACCAAGGTGCAGGATGGTTCTTGCAAGATGCTCGTCACGACGGTCGGGATGAGGACGCAGTGGGGTAAGCTGATGGCCACGCTGAGCGAGGGCGGCGACGATGAGACGCCGTTGCAGGTGAAGCTCAACGGCGTCGCCACCATCATCGGCAAGATCGGCCTCATCTTCGCAGTCGTCACGTTCGCCGTGCTCACCGAGGGCCTCTTCCGGCGCAAGATCATGGACGCCTCGTACCTGAGCTGGACCGGAGACGACGCGATGGAGCTGCTCGAGTTCTTCGCCATCGCCGTCACCATCGTCGTCGTGGCCGTCCCCGAAGGCCTCCCGCTCGCCGTGACGCTCAGCCTCGCGTTCGCCATGAAGAAGATGATGAACGACAAGGCGCTCGTCCGGCACCTCGCCGCCTGCGAGACCATGGGCTCGGCGACCACCATCTGCAGCGACAAGACCGGCACGCTCACGACCAACCACATGACCGTCGTCAAGGCCTGCATCTGCGGCAAGATCAAAGACGTGGAGAGCGCCTCGGACACCAAGAGCTTGTTCTCCGAGCTGCCGGAGTCCGCCATGACGCTGCTCTCGCAGTCCATCTTCAACAACACCGGCGGCGACGTCGTCTTCAACAAGAGCGGGAGTCGCGAGATACTTGGCACACCAACCGAGACGGCCATCCTCGAGTTCGGCCTCTCACTCGGCGGCGACTTCCTGGCCGTGCGCAAGGCGAGCACCCTCGTCAAGGTGGAGCCATTCAACTCGGCCAAGAAGAGAATGGGAGTGGTCATCCAGCTCCCCGGAGGAGCAATGCGTGCACACAGCAAGGGCGCGTCAGAGATCATCTTGGCATCTTGCAGCAAGTACCTGAATGATCAAGGCAACGTCGTGCCACTCGACGATGCAACCGTTGCTCACCTGAACGCCACGATCAACAGCTTTGCAAACGAGGCGCTCCGTACCTTGTGCCTTGCCTACGTCGATGTCGGTGACGGGTTCTCGGCGAATGACCAGATTCCTGAAGATGGCTACACCTGCATTGGCATTGTGGGGATCAAAGATCCAGTTCGTCCTGGTGTGAAGGAATCGGTTGCCATCTGCAGGTCGGCAGGGATCATGGTGAGGATGGTCACAGGTGACAACATCAATACAGCGAAGGCGATTGCGCGGGAATGCGGCATTTTGACTGAAGGTGGCATTGCCATTGAAGGACCGGATTTCAGAACCAAGAGTGCAGAGGAACTGAATGAGTTGATACCAAAAATACAAGTAAAGTTTTCGTTGCTTTTGCTGGTCAGTTTAACTGAATTTTCTGGATTTCATTTGCTGATGTGTTCTGGTTTCATGTATCAGGTGATGGCTAGATCTTCACCACTTGACAAGCACACCTTGGTGAAGCATCTCCGGACCACTTTTGATGAAGTTGTTGCGGTTACTGGTGATGGCACAAATGATGCTCCTGCTCTTCATGAAGCTGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTGATTTTCCTCAAAGATAGTTGATAGTGTTCCCCTTGCATGAACAATATAATTAATGAATTGCATCACTTCGATTTTTTTTAAAAGTGTATTTTTGTGGCAATTTAGCCGCTAATTTAGTTGTCTTGAGTTGTACTACCATCCATTTCATGCCCTCATAGTTCTATGCACTTTTTCACTCCCAAAATTTCTCACTGTGCTATCTGTTCGCAGGTGGCAAAAGAAAGTGCTGACGTGATTATTCTTGACGACAACTTCTCCACTATAGTCACTGTTGCTAAATGGGGTCGGTCAGTGTACATTAATATTCAGAAGTTTGTGCAGTTTCAGCTGACAGTCAATGTGGTCGCTCTGATAGTGAACTTCTCCTCAGCTTGCTTGACAGGTACAGCTAAATGTTGATGTTTTTTACCTCATTCTACTGTATAGAATTGATAGTTTCGTTCCGATTAAAATAACCTTTGATGTTGGTTTCTTGTAATAACTGCACTGCTGATACATGTTCATCTTTTATACTTCTCCTTCACCACTGTTCCTAGTCTGCTGCCTACTGTTTCTAAGTTCAAATACTGTTTAGTGTTAGTGCAGCAGAAATTTTTCGTTAGATTTCAAATGAGTGGCAGAAGAGACGTGCTAAAACTTAAAAAAATAAACTAACATAAAATTTATTAATGTGGAAAATCAAGAATTTCCTAGTTTGTTTCATAACTTACTCTTGACTGTTCTTTGTACTTCTGCTTGGCATTCAGGGAGTGCTCCTCTTACTGCTGTCCAACTGCTCTGGGTTAACATGATCATGGACACACTAGGAGCACTGGCATTGGCAACTGAACCTCCAAACGATGAACTGATGAAGAGAACTCCTGTTGGAAGGAAAGGGAACTTCATCAGCAACATTATGTGGAGAAACATCCTGGGACAGGCCTTCTACCAATTCATTGTAATATGGTATCTGCAGACAGAAGGGAAGTGGCTATTTGGACTAAAGGGAGAAAATTCCGATCTAGTCTTGAACACACTCATCTTCAATTGCTTTGTGTTCTGCCAGGTAATTTGAAAGTGCTTGTCACATCTATTTAGTGTCAAATAATTCTCTTGCATACATTTTTGCAAAAATAGACCTTAGCTCTTGAATAATATGTTGGCAAATATGTCTAAGGATCAATACTCACATGAATGTAGTACTTCAGCTGTAAAATGATGAATGAAAAATTTCAGACTATATTTTGCCAATATTAGTGTGCAGTTTCATTAAAATTTTCATTGTTGTGCAGGTGTTCAATGAGGTGAGCTCAAGGGAGATGGAGAGGATAAATGTATTTGAAGGCATTCTAGACAACAACGTGTTCGTCGCCGTCCTCGGCAGCACAGTCATCTTCCAGTTCATAATAGTACAGTTCCTGGGTGATTTCGCCAACACGACTCCTCTCACATTGAAGCAGTGGTTCAACTGCATTTTCATCGGTTTCATAGGGATGCCGATCGCTGCTGCGGTCAAGCTGATCCCAGTTGATTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012069