BGIOSGA012106

From RiceWiki
Revision as of 09:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012106| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012106, complete gene.| tag = OS03G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012106

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012106, complete gene.

LocusTag

OS03G0213100

Ensembl Transcript ID

BGIOSGA012106-TA

Ensembl Protein ID

BGIOSGA012106-PA

Length

2010

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6397071..6399080

Sequence Coding Region

6397071..6397414,6397613..6397840,6397919..6398273,6398358..6398482,6398609..6398744
,6398841..6399080

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6397071..6399080 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6397071..6399080 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGTGGCTTTAGGGTATTGCATCTTGTCAGGCCTTTTCTGGCTTTCCTGCCTGAAGTACAGAGTGCTGATAGGAAAATACCATTTAGAGAAAAAGTGATCTACACTGTTATTTCCCTATTCATTTTCCTGGTATGCAGCCAGCTACCACTGTATGGCATCCATTCAACTACTGGAGCTGATCCTTTCTACTGGATGCGTGTTATCCTTGCATCAAACCGTGGTACTGTTATGGAGCTGGGTATCACTCCAATTGTGACATCTGGCATGGTAATGCAACTTCTAGTGGGATCAAAGATCATTGAAGTTGACAACAGTGTGAGAGAGGATCGTGCTCTGCTGAATGGCGCACAAAAGTTACTTGGTATCCTGATTGCAATTGGGGAAGCTGTGGCATATGTTTTGTCTGGAATGTATGGCAGTGTAAGCCAGCTTGGAACTGGAAATGCCATCCTCATTATACTTCAGCTTTTCTTTGCTGGCATCATTGTCATCTGTCTGGATGAACTTCTCCAGAAAGGTTATGGTTTGGGTTCTGGCATTTCTCTCTTTATTGCTACCAATATCTGTGAGAATATCATCTGGAAGGCATTTAGCCCCACAACTATCAACAGTGGCCGTGGTGCTGAGTTCGAGGGGGCTGTCATTGCATTGTTCCATCTGTTGATTACTAGAACCGACAAAGTCCGTGCCTTGCGCGAGGCTTTCTACCGCCAGAATCTTCCAAATGTGACCAACTTGCTTGCTACTGTTTTAGTCTTCCTCATAGTTATCTACTTCCAAGGCTTCCGTGTTGTGCTACCAGTGAGATCCAAGAATGCCCGTGGTCAACAAGGCTCATACCCAATTAAGCTGTTCTACACTTCAAACATGCCCATCATTCTGCATTCTGCACTGATTACCAACCTCTATTTCATATCCCAGCTTCTCTACAGGAGGTACAGTGGAAATTTCCTGGTCAACCTTATTGGGAAATGGAAGGAATCTGAGTACTCTGGCCATTCTGTTCCTGTTGGTGGTCTTGCTTACTATGTAACTGCTCCATCAAGTTTAGCTGATGTTCTCGCAAATCCATTCCATGCACTGTTCTATGTGGTCTTCATGCTGTCAGCTTGTGCTCTCTTCTCAAAGACATGGATTGAAGTATCTGGTTCATCAGCAAAGGATGTTGCTAAACAGCTCAAGGAGCAACAAATGGTGATGCCAGGCCATCGTGAGTCGAATTTACAGAAAGAATTGAACAGATACATCCCTACAGCTGCTGCATTTGGTGGAGTCTGCATTGGTGCATTGACTGTCCTAGCTGATTTCATGGGTGCAATTGGTTCAGGAACTGGGATACTGCTCGCTGTTACAATCATCTACCAGTATTTTGAGACATTCGAGAAAGAAAGGGCTACCGAGCTAGGTTTCTTTGGGTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLGILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSALITNLYFISQLLYRRYSGNFLVNLIGKWKESEYSGHSVPVGGLAYYVTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF</aaseq>

Gene Sequence

<dnaseqindica>1..344#543..770#849..1203#1288..1412#1539..1674#1771..2010#ATGGCTGGTGGCTTTAGGGTATTGCATCTTGTCAGGCCTTTTCTGGCTTTCCTGCCTGAAGTACAGAGTGCTGATAGGAAAATACCATTTAGAGAAAAAGTGATCTACACTGTTATTTCCCTATTCATTTTCCTGGTATGCAGCCAGCTACCACTGTATGGCATCCATTCAACTACTGGAGCTGATCCTTTCTACTGGATGCGTGTTATCCTTGCATCAAACCGTGGTACTGTTATGGAGCTGGGTATCACTCCAATTGTGACATCTGGCATGGTAATGCAACTTCTAGTGGGATCAAAGATCATTGAAGTTGACAACAGTGTGAGAGAGGATCGTGCTCTGCTGTAAGTATTATGAGATTAACACTATGTTCTTTACTATTACCTGAACCTTGAAACTTAGTGCCTTATTTACTATGGTCTGCTGTTTGTAGCCCACCATATTTCAGCGAATGGCTATTGATTAAATGCTACTACGTATCTGATTCATGTTTACCATGTCTTTTGATTATATTTGTTACGCTAATGTACTTTTTTACCCAGGAATGGCGCACAAAAGTTACTTGGTATCCTGATTGCAATTGGGGAAGCTGTGGCATATGTTTTGTCTGGAATGTATGGCAGTGTAAGCCAGCTTGGAACTGGAAATGCCATCCTCATTATACTTCAGCTTTTCTTTGCTGGCATCATTGTCATCTGTCTGGATGAACTTCTCCAGAAAGGTTATGGTTTGGGTTCTGGCATTTCTCTCTTTATTGCTACCAATATCTGGTGAGCACATTGAACTTTGTTCTTCTCTATTGTTGACATTTTCTATTCAACTTGACTTATGGAAATCTTTCTCTGTAGTGAGAATATCATCTGGAAGGCATTTAGCCCCACAACTATCAACAGTGGCCGTGGTGCTGAGTTCGAGGGGGCTGTCATTGCATTGTTCCATCTGTTGATTACTAGAACCGACAAAGTCCGTGCCTTGCGCGAGGCTTTCTACCGCCAGAATCTTCCAAATGTGACCAACTTGCTTGCTACTGTTTTAGTCTTCCTCATAGTTATCTACTTCCAAGGCTTCCGTGTTGTGCTACCAGTGAGATCCAAGAATGCCCGTGGTCAACAAGGCTCATACCCAATTAAGCTGTTCTACACTTCAAACATGCCCATCATTCTGCATTCTGCACTGATTACCAACCTCTATTTCATATCCCAGGTCTGAACTTCAATTCCACTGCTTTAGCAAGATAAATCTTTAATGTTTGTGTTTAGCATTAACATGTTTGTATTGCTTTGGCAGCTTCTCTACAGGAGGTACAGTGGAAATTTCCTGGTCAACCTTATTGGGAAATGGAAGGAATCTGAGTACTCTGGCCATTCTGTTCCTGTTGGTGGTCTTGCTTACTATGTAACTGCTCCATCAAGGTGAAGAATCAATTTCATCAATGAGGCCTTCATCTCTTTGTGCTCGCAATTTTAGTTTCTGTTACTGTTTGATAAAATTTACTTTTAATTATACTTACCTTGGCATATGCACTGGAAATGTTGCAGTTTAGCTGATGTTCTCGCAAATCCATTCCATGCACTGTTCTATGTGGTCTTCATGCTGTCAGCTTGTGCTCTCTTCTCAAAGACATGGATTGAAGTATCTGGTTCATCAGCAAAGGATGTTGCTAAACAGCTCAAGGTAAAATAAAACAAAACTATTTTCTATATCTGGTCTGGAATGCAGAATTATCATGCAAGAGCTACCTTTAAACCACCAACCTTCGCAATTTAACAGGAGCAACAAATGGTGATGCCAGGCCATCGTGAGTCGAATTTACAGAAAGAATTGAACAGATACATCCCTACAGCTGCTGCATTTGGTGGAGTCTGCATTGGTGCATTGACTGTCCTAGCTGATTTCATGGGTGCAATTGGTTCAGGAACTGGGATACTGCTCGCTGTTACAATCATCTACCAGTATTTTGAGACATTCGAGAAAGAAAGGGCTACCGAGCTAGGTTTCTTTGGGTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012106