BGIOSGA012111

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Revision as of 09:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012111| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012111, complete gene.| tag = OsI_105...")
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Gene Name

BGIOSGA012111

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012111, complete gene.

LocusTag

OsI_10516

Ensembl Transcript ID

BGIOSGA012111-TA

Ensembl Protein ID

BGIOSGA012111-PA

Length

5650

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6468899..6474548

Sequence Coding Region

6468899..6468960,6469102..6469330,6469433..6469531,6469645..6469679,6469757..6469832
,6470615..6470725,6471065..6471151,6471366..6471459,6471553..6471670
,6472111..6472606,6473019..6473054,6473803..6474334,6474424..6474548

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6468899..6474548 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6468899..6474548 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGAGGACCGCGCCCCCAAGGTCCCCGACGAGCCCGCCGCCGCCGCGGCCAAGCAGAGGAAGAAAAGGAAGTGGGATCAGCCCGCGGAGGATGTCGTCGCCGCGGCGGCGGCTGCTGCTGCTGTGGCGGGGTTGCCCGTGGTGAACATCGGTGCCCTCTCCGGCGTGTCGATCCCGGGAGCCGCCGGTCCGTTGGGGAATATAGTCGCTGTGCCCTATACTTTGCCGGTGCATCTGGCGCCTTCGGTGCTCCAGACCGCCGCGGCAGCGGTCCAGAAATTGAGTCAGGCAAAAATGCCTGATGAGCTAATAGCAAGAGAAATTGTTATAAATGACGCCGATCCGTCTGTGCGATATAAGCTTACGAAACGGCAAACTCAGGAGGAGATTCAGAGATGTACAAGCACTGTCATCATTACTAGGGGAAGATACCATCCACCAAATGGACAAACTGATGGTGAGAAGCCACTCTACTTGCATATATCTGCTGGGTCTCAGCTAAAAGATACTGCTGAGCGTATCAAAGCAGTTGATCGTGCGGCTTCAATGATTGAGGAAATTTTAAAACAAGGCCCAAACCCAGAAGGCACTATCCAGAGCAACGGACAGGCCGTTCATCCTTTTAGTGCCTCAATATTTTTGGGTTTTCATGCAGATCCATCACTTAACGTTGCAGCTCGGGTTCGTGGTCCAAATGATCAGTACATAAATCACATCATGAATGAAACAGGGGTCACTGTTGTACTCAGAGGAAAAGGTTCAGGGACTCCGGTCAATTGTCATGCTGAAGCATCACAACAACCTCTACACCTCTACATCTCAAGTATGCATGTGAAGAACCTAGAAGCTGCAAAAGTTTTAGCAGAAAACCTTCTAGATACTATAGCAGCTGAATTTGGTGCTTCCAGAATTTCTTCTTCAAAAGTATATGGTGCTGTTCCACCTCCGCAGCAATTATTGGATGGTGTACAAACGTCAGGAACAATACCAGATGTACACCCTACTTTAGGCCCTAATGTGTTAACCGGAGCATCACATTCCTTTGCATCTACTGGAGCTAATGCTTCCTTAGTTGCTCCTTCAGTGACATCTCAATCTGGGGCCCCGTCTTATTCTGTGGTTCCACCACCTAGTAACCTGATATGTCCTAGTCAACCAGCAAATGGTGGGACATTTTATGGTGGCTATGGGGGCATTTATCCCCAGGCAACTCCATTGCAGCAGGTTGCATTAACACTCAAGCATGCTTCATCATCATCAACCCAGGTTGTTTCAGCGACGTCTACATCAACAAGCACTGTGGCAATGGTGAACCCTTGTTCACACGCAGAAGCAGATAAACGCTCACAAAGGAGGAAATTCCAGGAATTACCAGTTTCACAGGGCGCAACCACAGAAGTTCAGGTATTTTCTCTGACCTTGTCTGAAGCTCACAGGGTGAACTCACAACAGAGGTCCAAATTTGTTAAGACAGGTTTAGACGGTTTAGGTAACATGACCAATTCATCGATTGAACCTCCAATTAAAGTTCAGCCTGGATCAAATGGGATGCTTCTTCAAGATCAACCGCATGTTTCTGCACATCCATCTGCATCCAAGAACATGCTGCCGCCACCACCACCACCACCCAGGAACATGCTACCCCCACCTCCCAAGAGCATGCCTCCGCCACCACCTAAGTTTCCTTCAAATGAGATGTCAAGAAATGAGGATAGGTGTGCAGATTTAAACAAGCCAATGGCACCTCCGAAGAGCATGCCACCCCCACCTCCCAAGAGCATGCCTCCGCCACCGCCTAAGTTTCCTTCAAATGAGATGTCAAGAAATGAGGATAGGCGTTCAGATTTAAACAAGCCAATGGCACCTCTGAGATCCTTGGACGTGAGTTCAGTCTCACCACCAAATTTGTATTCAGCACAACTACCTTCAAAGGAGCCTAGAGTGGTCAAACCTGGTGGGGCATCTGTTTCTGATACTCTGCTGAAGCTTATGGATTATGGAGATGACGATGAAGAGGACAACATCGATGGGACGAATAGCGTGCTTGGAGGGAACCCAACTTCCATTTCTGGGCAGAAACCGTTTTGGGCTGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MTEDRAPKVPDEPAAAAAKQRKKRKWDQPAEDVVAAAAAAAAVAGLPVVNIGALSGVSIPGAAGPLGNIVAVPYTLPVHLAPSVLQTAAAAVQKLSQAKMPDELIAREIVINDADPSVRYKLTKRQTQEEIQRCTSTVIITRGRYHPPNGQTDGEKPLYLHISAGSQLKDTAERIKAVDRAASMIEEILKQGPNPEGTIQSNGQAVHPFSASIFLGFHADPSLNVAARVRGPNDQYINHIMNETGVTVVLRGKGSGTPVNCHAEASQQPLHLYISSMHVKNLEAAKVLAENLLDTIAAEFGASRISSSKVYGAVPPPQQLLDGVQTSGTIPDVHPTLGPNVLTGASHSFASTGANASLVAPSVTSQSGAPSYSVVPPPSNLICPSQPANGGTFYGGYGGIYPQATPLQQVALTLKHASSSSTQVVSATSTSTSTVAMVNPCSHAEADKRSQRRKFQELPVSQGATTEVQVFSLTLSEAHRVNSQQRSKFVKTGLDGLGNMTNSSIEPPIKVQPGSNGMLLQDQPHVSAHPSASKNMLPPPPPPPRNMLPPPPKSMPPPPPKFPSNEMSRNEDRCADLNKPMAPPKSMPPPPPKSMPPPPPKFPSNEMSRNEDRRSDLNKPMAPLRSLDVSSVSPPNLYSAQLPSKEPRVVKPGGASVSDTLLKLMDYGDDDEEDNIDGTNSVLGGNPTSISGQKPFWAV</aaseq>

Gene Sequence

<dnaseqindica>1..62#204..432#535..633#747..781#859..934#1717..1827#2167..2253#2468..2561#2655..2772#3213..3708#4121..4156#4905..5436#5526..5650#ATGACGGAGGACCGCGCCCCCAAGGTCCCCGACGAGCCCGCCGCCGCCGCGGCCAAGCAGAGGTGCGACCTCCCTTCCTATCCCTTCCTCGCTCGCTCCCTCCCCTGTCGCCGGAGCTCTCGCAGATCTCCCGCCATTCGCCGCGAAATTTCTCGCCACGCAACGGACAGGCGCATCTGATTTTGCGTGGGCTTGTGATGTAGGAAGAAAAGGAAGTGGGATCAGCCCGCGGAGGATGTCGTCGCCGCGGCGGCGGCTGCTGCTGCTGTGGCGGGGTTGCCCGTGGTGAACATCGGTGCCCTCTCCGGCGTGTCGATCCCGGGAGCCGCCGGTCCGTTGGGGAATATAGTCGCTGTGCCCTATACTTTGCCGGTGCATCTGGCGCCTTCGGTGCTCCAGACCGCCGCGGCAGCGGTCCAGAAATTGAGTCAGGTGTGACAATGATGTATTTTTCGTAAGTATATCAATATGTGTTGATTAGGCAATTCAGCACACGGTTCTAAAATTTTGTCTGTGTACATCTTGTTTCTTCAGGCAAAAATGCCTGATGAGCTAATAGCAAGAGAAATTGTTATAAATGACGCCGATCCGTCTGTGCGATATAAGCTTACGAAACGGCAAACTCAGGAGGAGGTAAAATTCCTTAATGAGACAATTGTTATGTGCTTCCTGTACAGGGTTAAACACCATTTTTGCGTAGATCACTTTGTGATAGCAGTAATAATGATTTGCTGGATACTTAACAGATTCAGAGATGTACAAGCACTGTCATCATTACTAGGTAAGCCAGGCAAAACGTAGATGTGACTTGTGACTGCGATGGTCCCTTTTGATATTTACTTGCTTTGACCTAACCAGGGGAAGATACCATCCACCAAATGGACAAACTGATGGTGAGAAGCCACTCTACTTGCATATATCTGCTGGGTCTCAGGTAAATCTTGTTCATATCATCAAATTGAGCCTCCATGTTATTTCCTGTCGTACCTGGGAGCTGTTAATTATTTGAAATTTGAATTACTAATTTTATCTGAATTTCTTGCATTGCAACTATTACATAATCACATAAACTCATGTAAATGGATGTTTTGATGGGCTATCCACATTCATTAACTATCTCTGCAAGTCTTCATTGAATTGTTTTCTCTATGATGGTGGTGTCAATTTATATGTTCGTATTTTATAAGTAACAGTGACAAGTACCATGATTTGATAACTAAATTTTGTATCTGTTACTACCAGATTGGCTATTACTTCTTTAGCTCCAAGCCTCCAACTAACATCAAGTGTTGGGAGTTAGGACTGAATTGGTCCTAGGTTTCTGATTTCTGTTCAACTAGGAAGCTTATATAGTAATGGAGTATGCACCTTTGATGTTATAAATGTTATAGAACAGTGATTGCAACAGTGTTTTTCTTTAGAAAATCAGATGCTAGTTTTCTGAACCTATGCTGATGTTTGATACAGCCAATAATTCAGTATGCCTGTCTGTTTGGCACAACACTCTCTAGTTGTGCAATGGTGTTCTGCTATTCTTTCACAGTGATATCATCCATCATTATTGCTGTTGTAATTTCAACAAAAAACTACATGGTCCATGCCATTTATGTTGCAGCATGTTTCAGTGATTGCTTTTAGTATAGTACAATACCTGTAGTACAAAAGATCCTTTTTATAGCAAGATAATGGTATGCTAATATTTTCCCCCAACTTTAGCTAAAAGATACTGCTGAGCGTATCAAAGCAGTTGATCGTGCGGCTTCAATGATTGAGGAAATTTTAAAACAAGGCCCAAACCCAGAAGGCACTATCCAGAGCAACGGACAGGTCTTCCCTTCATATCTCAGTCTGTTTAATATATGATATCTAATGGATTAATAGGCACCAAACCAAATATTATAAGTACACATGTCATAATCCATCTCTGTTATTCATTAAATGTGTTAATACATGGTCTGGTTAGTTCATTCATAATTATGTTGATGCAATCTTGAGAAGGAAAATAATAATCCACATATATGGTTGGTGCTTGTATTATTGTTTCCTGATTAATATGGAACCAGTTACAGTGTAGTTTTTTTTTTCAAGGGGAGCAGATAAATAATTACTACTTAACATATGGCAATTCTTGTTGAGAAGGCTAACATCTTCCTTTTGATGTTACAGGCCGTTCATCCTTTTAGTGCCTCAATATTTTTGGGTTTTCATGCAGATCCATCACTTAACGTTGCAGCTCGGGTTCGTGGTCCAAATGTATGTTCTCGTATTTTGTAAAATATTAAGCGTTATTGGATAATTCAACCATGCCATTGTTGCTATTACTGTCAGTATTGTTTTATGAATTCAGTCCAGTTCTGTTTACCCGTGGAAAAGAAAAGAAAACTAATCTTGAAGCTTTCTCTGGCATCCCAATTGGGATGGGAGAAACTGTTTTTGTGCTGCTGGTGCTTCTGATTTCTTTATGCAGGATCAGTACATAAATCACATCATGAATGAAACAGGGGTCACTGTTGTACTCAGAGGAAAAGGTTCAGGGACTCCGGTCAATTGTCATGCTGAAGGTCTGTAGTTTATTTTGGTAGCTCTTGGAAACTCGTGAGTTGGGAAGCATATTACTTCTGTTCCTTTGTGTAATGTCTATTGCTATACTACAGCATCACAACAACCTCTACACCTCTACATCTCAAGTATGCATGTGAAGAACCTAGAAGCTGCAAAAGTTTTAGCAGAAAACCTTCTAGATACTATAGCAGCTGAATTTGGTGCTTCCAGGTCTGTAAGTTTGGAATTTTTGTTTTGTGAAATTATGGATTCTTTTGCTTTAGTATCGTTCATTATAACTGCCCTTATAAAAAAATATAAATTGAAATTTTACATGATCAGTTGGATTTTAGTTATACAAATACCATGCTTCAGTTATGCTATGATTAGTCACTAATTCATCTTCTCTTTTCGTATTTGCCTCGAACTATTCCTTTTTTGTTGGTATCATTATAGTTGTACCAGTAAATGCTTTATTTATCTTGCTGAATATTAGTACTAGTAAATGCATTATCTATCTTGCTGAATATTAGGGTGAGAGGGTCTTATATCCAGACATTTCTAACCCATTTGCACTCGCCTGATCAGTAAAACATGGATTGATTCTGTTCTTAGAGATTGTATCGTACCACAAAGTTCTAATTATATTTTCATTTTCTTTTGTATGGCAGAATTTCTTCTTCAAAAGTATATGGTGCTGTTCCACCTCCGCAGCAATTATTGGATGGTGTACAAACGTCAGGAACAATACCAGATGTACACCCTACTTTAGGCCCTAATGTGTTAACCGGAGCATCACATTCCTTTGCATCTACTGGAGCTAATGCTTCCTTAGTTGCTCCTTCAGTGACATCTCAATCTGGGGCCCCGTCTTATTCTGTGGTTCCACCACCTAGTAACCTGATATGTCCTAGTCAACCAGCAAATGGTGGGACATTTTATGGTGGCTATGGGGGCATTTATCCCCAGGCAACTCCATTGCAGCAGGTTGCATTAACACTCAAGCATGCTTCATCATCATCAACCCAGGTTGTTTCAGCGACGTCTACATCAACAAGCACTGTGGCAATGGTGAACCCTTGTTCACACGCAGAAGCAGATAAACGCTCACAAAGGAGGAAATTCCAGGAATTACCAGTTTCACAGGGCGCAACCACAGAAGTTCAGGTACCATAGAACCCTGTGAAATTGATTTCGATTCTATATACAGTTGATGTTCTGATGGCATCGCTACGTAAGTCCTTGCATCATCCTATTTGAAGATGTGATTTCAGTGTCATTGTCGTAATAGTGCTTTTAATATGGTAATGTCTTCAAAGAAGGAACTTGTGCTGCAGAATAAGCAAATGTTTTTTTAGTTCATGTTATATATTGCATATGCAACCACATGAACGAATTGAATGTTTAATTATTTACTACTGTTGAGAAATCAGAACTTCATTTATACTAGAAAATCTACGATTCAAAATGTGATGTGAAATTTTCTTTTCATAGTGGTCCTTCAATGTTTACCAGATTGGCACGTTTTTTCTTTTTCCAAGACTGATTTATCTGCTACTGACGTTTTATTTCATTCCAGGTATTTTCTCTGACCTTGTCTGAAGCTCACAGGGTGGTAATAGAATGTGAATTTTTCACAGGGCTTGTTACAAGCTGGAGTTTGCACCAATGGAGTTTAACTGACGAGAGTCTTCTGCTTCTGAATTGGATTATTGCTTGTATTTTTTGATACTACATGAGTTTTTCAACCCGTAAATTGAATTAGCAAGGCACAGTCTTCTGCTTCTAAAGTGGATGACTGCTTGTACTATCTTGTTACTAACCCTTTGTGTTCAAGCTGTTGATGCCCACAAGAAGACTTCGTAAAGGACTGCATTTTTACCATTCCTTGAATTTGAAATTTGGTAGTTTCTTAGTAGGTTTAGGTACAATTTGGTCAAGTTTTTTCCTTCCTTTTCAGTTGGAGAAATAGGTTCAACCATTAAAGTTTTGCACGTTAAAGAGTTCTCACTTAGTGACATTCACAAGTAGTCCTAGAAAAGCAGAAACTTCTTAGCCTAATGAAACAATAGTATTAATGCAGTACCTTTTGCTTTATTTCTTTGTAGACACTTTTTATGAAGTTTCCGTTATGCTCTTTAGTTATATGAACTTTAGAAAGATGTAAGTTAATCTCTATAACTCTGCATGGTTAACTGATATCCATGTATGATGCTTACCAGTCATAATGCTTTCAATTTATGGATTTGTGCTGTTTATGCACAAATTTTGTTGATTTCATCCTTTATTTGTATTTCATTGTGTACTATTTACTCTAATGCAAAGGAATTTGATGGAGAAGTCTTTTTGTTTCATTTTTCCAGAACTCACAACAGAGGTCCAAATTTGTTAAGACAGGTTTAGACGGTTTAGGTAACATGACCAATTCATCGATTGAACCTCCAATTAAAGTTCAGCCTGGATCAAATGGGATGCTTCTTCAAGATCAACCGCATGTTTCTGCACATCCATCTGCATCCAAGAACATGCTGCCGCCACCACCACCACCACCCAGGAACATGCTACCCCCACCTCCCAAGAGCATGCCTCCGCCACCACCTAAGTTTCCTTCAAATGAGATGTCAAGAAATGAGGATAGGTGTGCAGATTTAAACAAGCCAATGGCACCTCCGAAGAGCATGCCACCCCCACCTCCCAAGAGCATGCCTCCGCCACCGCCTAAGTTTCCTTCAAATGAGATGTCAAGAAATGAGGATAGGCGTTCAGATTTAAACAAGCCAATGGCACCTCTGAGATCCTTGGACGTGAGTTCAGTCTCACCACCAAATTTGTATTCAGCACAACTACCTTCAAAGGAGCCTAGAGTGGTCAAACCTGGTGGGGCATCTGTTTCTGGTAATGGTGGAACACTATAATATCGTTGTTTTCTACATAGTGACAGAACCAATCCATCTTTACTGAACTTCTTTGGCATTCATTTGCAGATACTCTGCTGAAGCTTATGGATTATGGAGATGACGATGAAGAGGACAACATCGATGGGACGAATAGCGTGCTTGGAGGGAACCCAACTTCCATTTCTGGGCAGAAACCGTTTTGGGCTGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012111