BGIOSGA012112

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Revision as of 09:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012112| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012112, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012112

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012112, complete gene.

LocusTag

OS03G0214000

Ensembl Transcript ID

BGIOSGA012112-TA

Ensembl Protein ID

BGIOSGA012112-PA

Length

4893

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6475316..6480208

Sequence Coding Region

6475316..6475492,6475780..6475871,6475985..6476051,6476154..6476276,6476445..6476537
,6476902..6477031,6477236..6477317,6477435..6477567,6477999..6478204
,6478291..6478416,6478777..6479086,6479903..6480208

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6475316..6480208 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6475316..6480208 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATTGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGACTATGAGAAGACAGGAAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCACAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCGACTGGAGGCCAGGCACCGAGCAGTACAAGTTCATCGAGCACTGCTTCTCCTCCGTCGACCGGCAGAAACAGCCGTGGCTCATCTTCCTCGCCCACCGTGTTCTCGGCTACTCATCAGCCAGCTTCTACGTCGAGGAGGGCACAACCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGTCCATGGCTACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGCGTGGCGAAGGCGGCGAGCCACTACAGCGGCGCGTTCACGGCGACGACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTACGCCGGCGTACGGGCGCGGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAVLHALVALSLAGAVAAAGRGGEQPLSRIGIHRTTFAIQPGASVDASPLLLGLEGQDREWVTLTYNNPKPSKDDWIGVFSPANFSDSTCPSESQWVEPPLLCTAPIKFIFANYKNLDYEKTGKGSMKLQLINQREDFSFALFSGGLSNPKLIAHSKRVTFTNPKAPVYPRLAQGKSWNEMTVTWTSGYGTNEATPFVKWGLQGQIQSLSPAGTLTFSHSTMCGPPARTVGWRDPGFIHTSFLKDLWPNFKYTYRIGHRLSDGSIIWGHEYSFQAPPYPGEDSLQRVVIFGDMGKAEADGSNEFNDFEPGSLNTTYQLIKDLKNIDMVIHIGDICYANGYLSQWDQFTAQVEPIASSVPYMVGSGNHERDWPGSGSFYGNLDSGGECGVPAQNMFYVPAENREQFWYSIDYGMFRFCIANTELDWRPGTEQYKFIEHCFSSVDRQKQPWLIFLAHRVLGYSSASFYVEEGTTEEPMGRESLQPLWQKYKVDIAMYGHVHGYERTCPVYENVCVAKAASHYSGAFTATTHVVVGGGGASLADYAGVRARWSHVQDRDYGFAKLTAFNHTALLFEYVRSRDGSVHDSFTVSRDYRDILACGVDNCPTTTLAS</aaseq>

Gene Sequence

<dnaseqindica>1..177#465..556#670..736#839..961#1130..1222#1587..1716#1921..2002#2120..2252#2684..2889#2976..3101#3462..3771#4588..4893#ATGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGTACTACAGCTTTCTCAGCAACCTACTGTATCTACTAGCTCGTCAATTCAGCACTCGCTGCTGTTTTTTGCTCTTGTACGGACCTATATAGTTCGATGTAGTCAGTCATTACCACTTACCAGAGCTCGAGAGTTCTGATCCCAGTTAATAGTGCCTTAATTTAGTCGGTCGAGGCATATATTTGCATTTTGCAGCATTAGGATTTATAGGAGAATCAATCATGATTTTTTTTTTGAACTTCCATAGACCCACTGTATTCAAATTATTGGCTACCTTATCTGTTGCAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATTGGGGTGTTCTCTCCTGCTAATTTCAGGTACTTGCAATCCAATCATCCTGATGCTGGATGCCTGAATTGAATGCTTAATTAAGACAGCAAGAAAGAAGTTGAGATCTTATTTATATTTTGCCTTTTTGGCAATTTACCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGGTTAGTGTTACATCCAGTTAGCCTTATTCCATGTGAACTGTAGATGAGACTTCAGAAAACTTGCCAATAACATATGCTGAAGGAGGCACAATTTTTTGGCAGTTTATATTTGCAAACTACAAGAATCTTGACTATGAGAAGACAGGAAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATGTATGTGCCAAATTCTCCTCATTTATTTAGTGTGAAAACTTATTGTTGAACGATTCAGTTACCATGGTGGTATTTCTTGTATATTTTGTCTTTTCTAGTTAAAATACAATGTGACTGAACTATTATATGGTCTAACTTGCCTATGCCATGTCTTATATAACCTCACAGCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAGTAAGTATCATCTTGTTAAGTATTCCATAAGTAATGAAGTGAGTTTCAATTGAGCATCCTAGCCTGTGATCTGCAAAGGAAAATATCATTGCGGACAGAAATAAAATTTCGTTTATGGTCCTTTAGCACTTTTCAATGCAAGTAACCTATTTTTTTAATGGAATATGTTTATGAGCTCGAATGTCAAAGCAACAAAAACAGGAATGTAAGACATCTCAGATTGTTCCATTTAAGTGATATTTTTTTCTTCCGAAATAGTGTTTGCTTGTCTGCGTTGCTTATGAAACAAATGGGCACCAAAGTGCTTCTGCAAATCAGATCATACCATGTTTACAGAATAATGACTGATGTTAAGTGATTCTAGATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCACAGCACTATGTGCGGTGAGTAAATTTTCATTATGTTTTTACTTGCTCAGAGTAATAATCCCCCATTAGTGCTGACAAGTGACAACTAAAAAAGAAACACATCTTAGAATAATGGTATAATGGCAGAGCAGTTGTAGATCAAATAACCATTGACATGTAACTTTTGACGAACCTAATAAGATGATAACATTGTCATGCTTTATGATGATTTTACCACAGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTAAATGAGTGTTACACAACCTTGCTTTGTCTGCATCTGTGCCCTCTGTGGTCCTGTAACTATTCATTTGTACAAATGCAAGTGCCAACAAGTCTTACAAGTGAGTTTGTATTTCAGGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGTGTGAATATGATACCACTTACAATGTGCCTGTTTTTCCACGTTTATCTCCCAAAAGTGCAATAAATTATTAGGTAACTGATCACTGAATCGATATGGAACTCCATAGCTATTCAAAGTTAATATGGGAGATGTAGTACAACTTGTGCTTTAAATAAAATCTCTCAATTATATAAAAAAGATTAGATAGGGAACAATTAGCAGAAGGCCACCAAAGTGTGTCTTTATCTTTAGTTAGTAGTAGTAAATTGGTAATGACAATTATGCAAGTTAGAAAAGGTTGTACTCTTTATGAGTTCTATCATCTCGAGTCAAACTAACAAAGAATAAGATACTTAAGTACCTGCTACTCATGCTAAAACAAGAGAGATTATTTGCTACAAATTCGCTTTTCTCCTCTGGCCTTAATTGGCATTTGAACTCCTTGCACAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGGTACTCCGACTTGACGACAGAAACAAACCAAAGACAAGGTGGAAATTTCAAACAATGTTTCTGATGATATTGTTTTGTGCTTGCAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTAGGACATTTTTTCCCCTGAATTTTGTGAAATACTATACGAAACCTGGATATTTTAAGGCGTACCACTCATACATGTGACCACTTATCGAGACATTCTGGTTCACTAGACGATCATGCGTAAACATGCTTTTCTTATATACACAGATCAACATTAATAAATAACAAGCTATCATGTTTTTTTAGGCTGTACTAATAGCTAAAATTCATTGATCTCTCTTACTGAACACAACCAACTCTGCATAATCTCATCTTTCTTAGTACTGTCCATCAAAATTCTGAACAAAAAGCTACTACAAAAGATTATGGCCCCAATAACCTGCAGTCCTGCACCTGTTAAACCCTGAGATCATCCTTGCAGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCGACTGGAGGCCAGGCACCGAGCAGTACAAGTTCATCGAGCACTGCTTCTCCTCCGTCGACCGGCAGAAACAGCCGTGGCTCATCTTCCTCGCCCACCGTGTTCTCGGCTACTCATCAGCCAGCTTCTACGTCGAGGAGGGCACAACCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGTCCATGGCTACGAGAGAACCTGCCCAGTCTACGAGGTATATGAGCACTGTTACTCTTCCGTTCCCATACAGTTACTATTCTAGGTTGTTTAGTGTAGATTATGATTTAAAGAGAAGATTATAGTGCCCGTCATTGAATGGTGTATGTTTAGGTGTGAGAGAGTAGTTGGAGATTGGAGATAGAATAAAGAGAAATTTGAATTGAATGGTGTATGGTTAGGTAGTTGAGGGAGGGGCGGATCCAACGTGGGTGCAGGGGGAACTCTATACCCATGGATACCTCCCGGAGCACCCCTTCGAATTTTTCACCATAAATGATAAACTAAAGGTCCTTAAATGGCTAGAGGTTGAAGAAACTGCGTAATTGAGCCCCCCCTAATTTTTTTTGTTCCTGGATCTGCCCCTGTTGAGGGTATAATAACGAGATATTTGAATGGAAGGTAATTGATAGGGTACTCCCTCCGTCCCAGAATATAAAAAAGTAGGTAAAATTAAATAGAAAGATATTGTGATTGGTTCAGAAAGAGGTAGGTGGGAAAAGTAGATAGTGGATAGTTGTGATTGGTTAGGAAGAGAATTATAGTTAAGAAATTATTATATTTTGGAGCAATTCTGAGTGCTAAAAGTTGTTATATTTGGGACGGAGGGAGTAATATGAAGTGATAAGTATTTTGAAATAAAATTGAATCCTACTATTTTGAGATAAAATTTGAATCACACAGGGACAACTATTTTAGAAGTATAGAACGTGAGAACAGCTAAAGTGTAAAGTATGTGTTTTTCTTGTGAATTTATGGCTGTGGCTCTCATTTTCTGCTTGTGTTTTACTGTGTGTGAAATGTGTGCATTCAGAATGTGTGCGTGGCGAAGGCGGCGAGCCACTACAGCGGCGCGTTCACGGCGACGACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTACGCCGGCGTACGGGCGCGGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012112