BGIOSGA012123

From RiceWiki
Revision as of 09:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012123| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012123, complete gene.| tag = OsI_105...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012123

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012123, complete gene.

LocusTag

OsI_10538

Ensembl Transcript ID

BGIOSGA012123-TA

Ensembl Protein ID

BGIOSGA012123-PA

Length

2580

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6659131..6661710

Sequence Coding Region

6659131..6659376,6659496..6659633,6659775..6659885,6660084..6660291,6660401..6660482
,6660702..6660810,6661283..6661399,6661486..6661710

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6659131..6661710 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6659131..6661710 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCCCAGGAAGCTTCATCTGGCCTCCATTTCTGCCCTATCAATCTTTCTCTACGTGTTTGCTCACACCAATTCAGCACAAGCCTTCCCCGTCGCTGACGGCACGTACCCTCCTGAAGCTGAAGGCCCAGCAGCAGAAAGTTCAGACATGGACGAGCAGCTGGAGCTCACCCCTGGACCGCAGCCGAGGGTCGTCGACGTCGACGACTACAGAGCGAGAGCCGACGCCGGCGACCACACGGAGGCGTTTCTTCAGGCCTGGAAGGAGGCCTGCAACTCCTCCGATTACCCATCCGTGCTCCTCGTGCCGGAGGGGAAGACCTACCTCCTGATGCCTGTAAGCTTCAATGGCCCCTGCAGAGCCACCACGATCACTGCAACGGAATGGATCACGTTCGACAACATCGATCACCTCCGTGTCCTCGGCGGCGGGACGCTCAATGGCAATGGACACCAATGGTGGATCAACTCTTGCAAGACCAACAGATCCATGGCGCTGTACTTCAGGAGGTGCAACCATCTGGTCGTGGATGGCCTCCAGATCAGGGACAGCATGCAGATGCACGTCGTGATCGCCTACTCCTGGAGAGTGCTGGTCTCGAGGCTGCTCATCACGGCGCCAGGATGGAGCCCCAACACCGACGGCATCCACGTATCCAACAGCAGGGAAGTGTTGATGAGTGGCTGCATCATCAGCACAGGTGATGACTGCATATCAATTGTGACCGGCTCTATGTTTATACGGGCAACCGGGATATTTTGTGGACCAGGCCATGGCATAAGCATTGGTAGTCTAGGAGCAAACAAATCATGGGCCCATGTTTCCGACGTGCTGGTGGAGAAAGCTACACTGGTGGGCACTACCAACGGTGTGCGGATCAAAACTTGGCAGGGAGGAGATGGCCATGCAGAAAGGATTACCTTTCAAGATATAACAATGCACAACGTCACTAACCCGGTGATTATCGATCAGAATTACTGTGACTCCATGACACCATGTCATGAACAGGGATCAGCTGTCGCCATAAATAACATACGCTACAGGAACATACGTGGAACTAGTTCTTCAAAAGTCGCCATCAACTTCGTCTGCAGCAACTCTGTCCATTGTGATGGCATAGTGATGCAGGATGTTTCTTTGGTTGGAGAAGGATCCTACGTTTCTTGTTCGTACATGAATGCTAGAGTGGTAGAGTTGGGGTATAACTTCCCGTATTGCAGAGCGGAAATGTAG</cdnaseq>

Protein Sequence

<aaseq>MGPRKLHLASISALSIFLYVFAHTNSAQAFPVADGTYPPEAEGPAAESSDMDEQLELTPGPQPRVVDVDDYRARADAGDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPCRATTITATEWITFDNIDHLRVLGGGTLNGNGHQWWINSCKTNRSMALYFRRCNHLVVDGLQIRDSMQMHVVIAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGDDCISIVTGSMFIRATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGDGHAERITFQDITMHNVTNPVIIDQNYCDSMTPCHEQGSAVAINNIRYRNIRGTSSSKVAINFVCSNSVHCDGIVMQDVSLVGEGSYVSCSYMNARVVELGYNFPYCRAEM</aaseq>

Gene Sequence

<dnaseqindica>1..246#366..503#645..755#954..1161#1271..1352#1572..1680#2153..2269#2356..2580#ATGGGTCCCAGGAAGCTTCATCTGGCCTCCATTTCTGCCCTATCAATCTTTCTCTACGTGTTTGCTCACACCAATTCAGCACAAGCCTTCCCCGTCGCTGACGGCACGTACCCTCCTGAAGCTGAAGGCCCAGCAGCAGAAAGTTCAGACATGGACGAGCAGCTGGAGCTCACCCCTGGACCGCAGCCGAGGGTCGTCGACGTCGACGACTACAGAGCGAGAGCCGACGCCGGCGACCACACGGAGGTGAACGAGACCACCCCAACTGCTCTGCTCTCTCGAATTGCCCGAGATTTCTGCCGCAATGCTGCCCCGTGTGGCAAGAATTCTCTGAACTTCCCTGACGCGGCTGATGCGCGTTACAGGCGTTTCTTCAGGCCTGGAAGGAGGCCTGCAACTCCTCCGATTACCCATCCGTGCTCCTCGTGCCGGAGGGGAAGACCTACCTCCTGATGCCTGTAAGCTTCAATGGCCCCTGCAGAGCCACCACGATCACTGCAACGGTGAGTGCTCCGATTGCTGTTCAACTACTCATCAGGATGAATCCTCCATTGCTGTTCAGATCATGACGTTTCAGAGTTCAGATAAGGGGGACGCTGGAGGCTCCATCGAATCGATCGGTTTGGCTCGATCGCGATCTGCAGGAATGGATCACGTTCGACAACATCGATCACCTCCGTGTCCTCGGCGGCGGGACGCTCAATGGCAATGGACACCAATGGTGGATCAACTCTTGCAAGACCAACAGATCCATGGTACTTGCCCACTGCACTCGCTTACCTCTCATGAACATTTCCTCGACATGATCCTGGCTCACTCACAAAACTCCATTTTTTCTTTTCTTTCAACCACGGATCAGAGATGCGTCACCGGCCCAACGGTACCCTGTTTGATCAGAAAATCTTTGCATACTTGCATTGCATGAGCAATGTGTTTCAGCTGGCGAACTGCAGGCGCTGTACTTCAGGAGGTGCAACCATCTGGTCGTGGATGGCCTCCAGATCAGGGACAGCATGCAGATGCACGTCGTGATCGCCTACTCCTGGAGAGTGCTGGTCTCGAGGCTGCTCATCACGGCGCCAGGATGGAGCCCCAACACCGACGGCATCCACGTATCCAACAGCAGGGAAGTGTTGATGAGTGGCTGCATCATCAGCACAGGTACCAATGGCTGTTTATGTAGATTTTCAGAATGTATCACAAATGACTTTATTTATCTGCAAATGTTGTTCATCACTCTGTTGTACTTTTGTGTTGTGAGTTGGCGTAGGTGATGACTGCATATCAATTGTGACCGGCTCTATGTTTATACGGGCAACCGGGATATTTTGTGGACCAGGCCATGGCATAAGGTACGTTATCTCTAGTAAGACTCTGAACTTGTATCTTTCTCTCTATACTCGCCTATTTCCATACACAATTGGGATTTGTGGTGTATAATGGTCCACGCTGGGATTCAGGGCTACACGTTTCATACTTGTCGTTTCCAGTAATAATCAATTTATTAAAAACATGCAGTAGACTGTAGATAGGGTTTTCTGATGTTTTATTGGCATTGGTCGCTGTTGCAGCATTGGTAGTCTAGGAGCAAACAAATCATGGGCCCATGTTTCCGACGTGCTGGTGGAGAAAGCTACACTGGTGGGCACTACCAACGGTGTGCGGATCAAAACTTGGCAGGTAATGCACGTCCACCTTGCTGGATTGGCTTGGATGGAAAATTGGAGAAATATTCTGAATTTGAAACAGCATTGTTCTCAGAGTCACCCTCTTGAACCTTCTGCTCCCAGAAAAGAGCGATGGCGTTGATTTCCAAATTCAACAACGCCTTGACAGATGAATTTAATTATAACTACATCCAAGAACATATATGATGTAGTACTACGAAATTATACTAGTTATAAGCAGTACTTGTAGTTGTAATATTGTAGTATCTTGCTAATGCATTTCGTACATATAAGAGGTAATCTAATATAGATAAATCCACTCTCCTTATATAGTGCTATATACTCCTATATTTCTATAGGTCATATAGAAAAGGTAGTTCCAAAAGCGAAATGTGGTATTGTTGGAAAATAAGAAATTTTGTGCCTAACTGCTGAAATGTTTGTTCCTGCAATTTATGCTTCCCCTCTTATCATCCTTTTGACAGGGAGGAGATGGCCATGCAGAAAGGATTACCTTTCAAGATATAACAATGCACAACGTCACTAACCCGGTGATTATCGATCAGAATTACTGTGACTCCATGACACCATGTCATGAACAGGTACTATCCTACAATAACTCCGTCTCTTCTTCTAGAGACCGATCAGCCAAGCCCCAGTTAACAGTGTTTGGTAAAACATTTTGCAGGGATCAGCTGTCGCCATAAATAACATACGCTACAGGAACATACGTGGAACTAGTTCTTCAAAAGTCGCCATCAACTTCGTCTGCAGCAACTCTGTCCATTGTGATGGCATAGTGATGCAGGATGTTTCTTTGGTTGGAGAAGGATCCTACGTTTCTTGTTCGTACATGAATGCTAGAGTGGTAGAGTTGGGGTATAACTTCCCGTATTGCAGAGCGGAAATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012123