Os12g0428600
| Gene Name |
Os12g0428600 |
|---|---|
| Description |
Similar to E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-) (Ubiquitin-protein ligase 2) |
| Version |
NM_001073203.1 GI:115488367 GeneID:4352108 |
| Length |
4554 bp |
| Definition |
Oryza sativa Japonica Group Os12g0428600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:13846009..13850562 |
| Sequence Coding Region |
13846009..13846251,13846344..13846618,13847024..13848131,13848207..13848353,13848465..13848545 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:13846009..13850562 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:13846009..13850562 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gtttctcgtcgtgttcttgaaactttgacatacttggcaagaaatcatccaaatgtggctaaactcttgctatttcttgagttcccttgccccccaacttgccatgctgaaacatctgatcagaggcgtggcaaggctgttcttatggaaggtgacagtgaacagaacgcttatgcacttgtcctacttttaaccttgttgaatcagccactttatatgaggagcgtagctcatcttgaacagctactaaaccttctcgaagttgttatgctcaatgccgagaatgaaattacacaagctaagctggaagcagcatctgaaaaaccatctggacctgagaatgcaacgcaagatgcccaagagggtgcgaatgctgctggatcatctggatcgaagtccaatgctgaggatagcagcaaactccctcctgttgatggtgaaagtagcctgcaaaaagttctgcagagtcttccccaagcagagcttcgactgctatgttcactgcttgcacatgatgggttgtcagacaatgcgtatctcctggtagcagaagttctgaaaaagattgtagctcttgctccttttttctgttgccatttcataaatgaacttgcacattcaatgcaaaatttgacgctttgtgcaatgaaggagcttcacttgtatgaggattctgaaaaggctcttcttagcacatcatcagccaatggcactgcaattcttagagttgtgcaggctttgagttctcttgtcaccactctgcaagagaaaaaggatccagatcatcctgctgaaaaagatcattctgatgcattgtcccagatttctgaaattaacactgcattggatgcattatggttggagctgagtaattgcataagcaaaatagagagctcttcagaatacgcatcgaatctaagtcctgcttctgcaaatgcagccacattaacaacaggtgtagcacctccattgcctgccggaactcagaacatattaccgtacatagaatcatttttcgtgacatgtgagaagttacgccctgggcaacctgatgctattcaagaagcttcaacatctgacatggaggatgcatcaacttctagtggtgggcagaaatcatctggaagccatgcaaatcttgatgagaagcacaatgcgtttgttaaattctcagagaaacacagaagattgttgaacgcatttatccgccaaaaccctgggctattggagaagtcattctctctgatgttgaaaatccctcgcttgattgaatttgacaacaagcgtgcatatttccggtctaaaattaagcatcagcatgatcatcatcatagccctgttagaatttctgtgcgccgggcatatattttggaggattcatataaccagcttaggatgcgttcaccacaggatttgaagggtagactgactgttcatttccaaggtgaagaaggcattgatgctggtggactaacaagggaatggtatcagctgctatcacgagtgatttttgataagggtgcccttctattcacaactgttggaaatgacttgacatttcaaccaaaccctaactcggtgtatcagactgaacacctctcatatttcaaatttgttgggcgagtggttggtaaagctctatttgatggccaacttttggatgtccattttacaagatctttctacaagcacatactaggtgtcaaggttacataccatgacattgaagctattgatcctgcatactataaaaatttgaaatggatgcttgagaatgacataagcgatgttctggacctctccttcagcatggatgcagatgaagagaagcggatattgtatgagaaggcagaggtgactgattatgagttgattcctggaggccgaaacatcaaggtcaccgaggagaacaagcatgaatatgtgaaccgggttgcagaacatcgtttaaccactgctattaggcctcaaatcacctcttttatggagggatttaatgagctcattcctgaggagctgatatcaatctttaatgacaaagaacttgaactgctaatcagtggactcccagacattgacttggacgatctaaaagcaaatacagaatattctgggtacagcatagcttctccagtcattcagtggttctgggagattgtccaagggttcagcaaggaggacaaagcccggttccttcagtttgttactggcacctcaaaggtacctctggaaggtttcagtgcactccaaggaatatctggaccacaacgattccagatacacaaggcctacggaagcaccaaccatctgccttcagcacatacttgctttaaccaactagaccttcctgagtacacatcgaaagagcagctccaggagagattgctactggctattcatgaggcgaatgaaggtttcggatttggttaa</cdnaseq> |
| Protein Sequence |
<aaseq>VSRRVLETLTYLARNHPNVAKLLLFLEFPCPPTCHAETSDQRRG KAVLMEGDSEQNAYALVLLLTLLNQPLYMRSVAHLEQLLNLLEVVMLNAENEITQAKL EAASEKPSGPENATQDAQEGANAAGSSGSKSNAEDSSKLPPVDGESSLQKVLQSLPQA ELRLLCSLLAHDGLSDNAYLLVAEVLKKIVALAPFFCCHFINELAHSMQNLTLCAMKE LHLYEDSEKALLSTSSANGTAILRVVQALSSLVTTLQEKKDPDHPAEKDHSDALSQIS EINTALDALWLELSNCISKIESSSEYASNLSPASANAATLTTGVAPPLPAGTQNILPY IESFFVTCEKLRPGQPDAIQEASTSDMEDASTSSGGQKSSGSHANLDEKHNAFVKFSE KHRRLLNAFIRQNPGLLEKSFSLMLKIPRLIEFDNKRAYFRSKIKHQHDHHHSPVRIS VRRAYILEDSYNQLRMRSPQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGA LLFTTVGNDLTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHIL GVKVTYHDIEAIDPAYYKNLKWMLENDISDVLDLSFSMDADEEKRILYEKAEVTDYEL IPGGRNIKVTEENKHEYVNRVAEHRLTTAIRPQITSFMEGFNELIPEELISIFNDKEL ELLISGLPDIDLDDLKANTEYSGYSIASPVIQWFWEIVQGFSKEDKARFLQFVTGTSK VPLEGFSALQGISGPQRFQIHKAYGSTNHLPSAHTCFNQLDLPEYTSKEQLQERLLLA IHEANEGFGFG</aaseq> |
| Gene Sequence |
<dnaseqindica>1..243#336..610#1016..2123#2199..2345#2457..2537#2621..2846#2935..3074#3703..3809#3979..4081#gtttctcgtcgtgttcttgaaactttgacatacttggcaagaaatcatccaaatgtggctaaactcttgctatttcttgagttcccttgccccccaacttgccatgctgaaacatctgatcagaggcgtggcaaggctgttcttatggaaggtgacagtgaacagaacgcttatgcacttgtcctacttttaaccttgttgaatcagccactttatatgaggagcgtagctcatcttgaacaggttaacattctttcttgttttttattttctgttgtggctctttattaaaatttccagtcatatttttatcctaaccattggaacttgtgtagctactaaaccttctcgaagttgttatgctcaatgccgagaatgaaattacacaagctaagctggaagcagcatctgaaaaaccatctggacctgagaatgcaacgcaagatgcccaagagggtgcgaatgctgctggatcatctggatcgaagtccaatgctgaggatagcagcaaactccctcctgttgatggtgaaagtagcctgcaaaaagttctgcagagtcttccccaagcagagcttcgactgctatgttcactgcttgcacatgatgggtataaactttcccaattttggtgaattgcttataattcatttttttctcctatttaattctattactttcatagtgtaagcacattgaggaaatcataaatgcagctattgcaacattacttctcttctctttagtacttgtgcatatggtgggtttcaacttacattgcagatttgattaagtttgattattctctggttatgttgtttaggtcttcatcaaatagatgataagaaactaggctgctagttgcatcagcattttcttgtccttggtttcgttctttgtgatctgtgtttccttttagaaacatagatggcagagctgtaactttttcatatatttgtttctgctattatttctgttacgactaataaaagaaatgcttgtgtttgtctttcaggttgtcagacaatgcgtatctcctggtagcagaagttctgaaaaagattgtagctcttgctccttttttctgttgccatttcataaatgaacttgcacattcaatgcaaaatttgacgctttgtgcaatgaaggagcttcacttgtatgaggattctgaaaaggctcttcttagcacatcatcagccaatggcactgcaattcttagagttgtgcaggctttgagttctcttgtcaccactctgcaagagaaaaaggatccagatcatcctgctgaaaaagatcattctgatgcattgtcccagatttctgaaattaacactgcattggatgcattatggttggagctgagtaattgcataagcaaaatagagagctcttcagaatacgcatcgaatctaagtcctgcttctgcaaatgcagccacattaacaacaggtgtagcacctccattgcctgccggaactcagaacatattaccgtacatagaatcatttttcgtgacatgtgagaagttacgccctgggcaacctgatgctattcaagaagcttcaacatctgacatggaggatgcatcaacttctagtggtgggcagaaatcatctggaagccatgcaaatcttgatgagaagcacaatgcgtttgttaaattctcagagaaacacagaagattgttgaacgcatttatccgccaaaaccctgggctattggagaagtcattctctctgatgttgaaaatccctcgcttgattgaatttgacaacaagcgtgcatatttccggtctaaaattaagcatcagcatgatcatcatcatagccctgttagaatttctgtgcgccgggcatatattttggaggattcatataaccagcttaggatgcgttcaccacaggatttgaagggtagactgactgttcatttccaaggtgaagaaggcattgatgctggtggactaacaagggaatggtatcagctgctatcacgagtgatttttgataagggtgcccttctattcacaactgttggaaatgacttgacatttcaaccaaaccctaactcggtgtatcagactgaacacctctcatatttcaaatttgttgggcgagtggtgagtgatattgctccttgtttttcactttcagctttgtgcaattgttgttggttctaaaagttgtccctccaggttggtaaagctctatttgatggccaacttttggatgtccattttacaagatctttctacaagcacatactaggtgtcaaggttacataccatgacattgaagctattgatcctgcatactataaaaatttgaaatggatgcttgaggtaaatatttttttcccagtacaatggttgattcagcttcttgattattaggtggtaattttcagttgtctttttagatgtgtaataatgtattctcatttctgtgtacagaatgacataagcgatgttctggacctctccttcagcatggatgcagatgaagagaagcggatattgtatgagaaggcagaggtataagcctatctctgtgtttgtctgtcttttcgctgttgcttgtctttgcttgaaacttagtcctgaacccatctatgcaggtgactgattatgagttgattcctggaggccgaaacatcaaggtcaccgaggagaacaagcatgaatatgtgaaccgggttgcagaacatcgtttaaccactgctattaggcctcaaatcacctcttttatggagggatttaatgagctcattcctgaggagctgatatcaatctttaatgacaaagaacttgaactgctaatcagtggactcccagacattgactgtgagtatcacccatgatttaggactgtttaattatctgtttttttatcttacagttaattaacttgttttgtatctctcgctttcagtggacgatctaaaagcaaatacagaatattctgggtacagcatagcttctccagtcattcagtggttctgggagattgtccaagggttcagcaaggaggacaaagcccggttccttcagtttgttactggcacctcaaaggtactttgctgatgatgccttgtgaagtattttttatttagaagcgttagcccacatgattctatcttacttggtgattccccgcgctttgctacgggaattactaaacatttctcaatatatttttttcaacaatcaagctagaagtgaaagggaaaaaataataatgaaacattagggtttatccatacttatcatgaaacaaacaaatggtatttgcgctttgatgtgaaacatattgataagtatatgtttaatattataaaaatgatagatttgtaaaaatattgtgcaaataatgtgaggggtgatgattggatatgcttgcatgttgatttgtagaattaaataaattgtagataatgttgaagttaaatatgtaattattgctcgtgggtgatgatgtggcatagttgcatgttgaacgacttagtgggctataactttatagtaagataggattagtctggtgttctccctcaaagctcactaatttttttaccccgcccatgtgataagctgagttattcagcatgatttgagtattggctggcacattcaattctttaatgataatcttttgcgtattatatttggtttcttattcttttgtgttaaactactgtaggtacctctggaaggtttcagtgcactccaaggaatatctggaccacaacgattccagatacacaaggcctacggaagcaccaaccatctgccttcagcacatacttggtaatccatcttcactgcactcacttttgacactagaaaaaaaatcatttggcacaattaagggttcaaaatcctgctggtggttaccctttttgtccagctataatgttgttttattttatttacttgagatcagtcctgacaactctactgcccttgctcactgcagctttaaccaactagaccttcctgagtacacatcgaaagagcagctccaggagagattgctactggctattcatgaggcgaatgaaggtttcggatttggttaatcagtcactcctgcacctgtgtgcaagaaatttcagggagtaatgtacagataccgtcggagttgcaataggcgaggggaatgtgcgcggactcttacataacctgctactagattcatttgttgcctgcatcaaccatcggcgttggtccctgaagactgatgagatttgttgacaaagtaccggcctgcccacgatgctttataggactggttgctgcgaaggatgtgcagggaggtgtagcaggaagtgctagaagacagcaactatttggtgttcataatattttttttctttcccttttgggtcttttttggccattgccccgttaatagatttcaccttctctatacattggacctgtatggaatttttttccttttttattcaagtttgtttttggggggcatagaccggtggaatgcaacattaagtagaatgcaagttttccatcgctattgcatattcaatgc</dnaseqindica> |
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