BGIOSGA012144

From RiceWiki
Revision as of 09:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012144| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012144, complete gene.| tag = OsI_105...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012144

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012144, complete gene.

LocusTag

OsI_10571

Ensembl Transcript ID

BGIOSGA012144-TA

Ensembl Protein ID

BGIOSGA012144-PA

Length

2030

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6897744..6899773

Sequence Coding Region

6897744..6897881,6897966..6898015,6898128..6898233,6898342..6898400,6899719..6899773

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6897744..6899773 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6897744..6899773 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCCCTGCCACCGCCGCGTCCGCCTCACCGGAGCCACCGGCGAGTCCCCGCCGCCTGCTGCCTCTTCCTACTCCTCCTCGCTCTCGTTCTCCTCCCCTCCGCCGCCGCCAAGTCATCCCGCCGCCCCATCACCGACAACGAGATCCGGGAGAAGAAGAGCGCCTGCTACACCGACGTCGAGAATGGATTGTGGGGATGGGCGTGCAAGTCCTCGGCGACGGAGAAGGAGAACTGCGTGCTGCGGTGCCTCTCGCCGGAGTGCTACGATCTCATATACGGCGGCGACCCGCTTGAGGAAGGGGAGCTGGACTACATCCGTGGCCACGAGTACAAGTACTGCATGCACAAGTCTTCCCTTGGTGAAAGCTTGGATGGTGTCAAGGGTTCCTTCAGCTATTCATGA</cdnaseq>

Protein Sequence

<aaseq>MAPLPPPRPPHRSHRRVPAACCLFLLLLALVLLPSAAAKSSRRPITDNEIREKKSACYTDVENGLWGWACKSSATEKENCVLRCLSPECYDLIYGGDPLEEGELDYIRGHEYKYCMHKSSLGESLDGVKGSFSYS</aaseq>

Gene Sequence

<dnaseqindica>1..138#223..272#385..490#599..657#1976..2030#ATGGCTCCCCTGCCACCGCCGCGTCCGCCTCACCGGAGCCACCGGCGAGTCCCCGCCGCCTGCTGCCTCTTCCTACTCCTCCTCGCTCTCGTTCTCCTCCCCTCCGCCGCCGCCAAGTCATCCCGCCGCCCCATCACCGTACGTCTCCCTACCTAATCCCTGCCTTTCCTTGGCGGCCCCTGTCCGTCTCACCGTTCTTGTGCTGCGAATCCCGTGGTCCAGGACAACGAGATCCGGGAGAAGAAGAGCGCCTGCTACACCGACGTCGAGAAGTACGTGCGCCGGAATTACGCTTCCCCCCGTCTGTGTTCGGTGGGGGTGGTTTTGATGGGGAAGTTTCTAATTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCGGTGGGACAGTGGATTGTGGGGATGGGCGTGCAAGTCCTCGGCGACGGAGAAGGAGAACTGCGTGCTGCGGTGCCTCTCGCCGGAGTGCTACGATCTCATATACGGCGGCGACCCGGTGAGTGGCGGCGTGAGAGTGAGATGTGATGTTTCAGAGGAGTTTTTTTTCTAAAAAAAAAATCAGGATTCCTTTGAATTTTATTTTGGGTGTTTTGTGTTGTGGCAGCTTGAGGAAGGGGAGCTGGACTACATCCGTGGCCACGAGTACAAGTACTGCATGCACAAGTAAGAAACAGAGATATATTTGCAATCTGTTGTTAAGTTTAGGTTTTTGGATGTTGAATTGGGTCTACCCTGAGTCCAACTTCCATGGGTTTGCCGAGTTAGCACATGTGGGTTACTGTAGCACTTATAGCTAATCATGGACTAATTAGACTCAAAAGATTCGTCTCGCTATTTCCCCCCTAACTGTGCAACTAGTTTTTTTAATCTATATTTAATGCTCCATGCATGTGTCCAAAGATTCGATGTGATGTTTTTGGGAAAAAAAATGGGAACTAAACTAGGCCTGAATATGATTGAACGAACACACCCATCTGCTCAACCTTGTTACAACATGCTTTCTGTGAGCTATAGGAGAAGGGGTCAATAGTTACTGAATAACTGAATATAGCAATCACAGCAACATTCTAACAATACTACTTCTAACAAACAAAATGATTATGTTTGTTCTACCCAAGTGTTCCCCGACATATTCCTCAACCTCCACAAACTCCAATAGAGCAAAGGTTATGTTCTCCACCCAGTTATCGCTTGGATTATGCAGTCTAGATATTGAGGGCCAACCACCAATTTTGGCACATCCAAATGTTCGATAGTCTGACTGATCATCCACCATTATATTTTCAGTCCATTGGAACTTTTTTTTTTGTTATCATATACTGTCATTTATCAGTTCCACCTTGTTACTGAAGAGGGAGAATTTCACTTTAGTTTGCACGTGTAAAACGAATGATATGCTTCAGTCCTCCCATGATTGATTAGCTTGCTAAACATAACCAAAATAGCCTGACTAGGAAGAGCATTTTGTTGTTTTCCTTTTCTGATTCAGATATTTCTACTTGAAAGATCATAAAACATTGAATTATCAGCAAATGTCCTGAGAAAATAAATCTGCTACTCCAGATATTATTGCAGTTAACGTTCCAAGAGTAATTGACTCAAATTTAGATACTGCTATTGTGCCACATTTTGATCACTGTGAATCTGCAATCCTGTTTTATGAAATTTACTTACGACTAGCTGAAGTGTTATCTTCAGGTAAATAAAAATACAGAATACTTAACTAAAGGAAAATCAAGCTGTTGGTGTTATTACAAGAATAATTCTCTAATATGAGGATGTTTTGCAAAAGACATTGACATTAGATTTCATGCATTTCTGTTATGTATATACACGCTCCAATTTTGAATTGCACTTAGAAAATTATACATCTAAATTGGAATTTGTATCACCATTGCATGATTACTGTTAGACCTCTACCCATCAAGTTATTCTGCTGTTTTTCTCCTTAACCGTGATGTCTTTCGTACAACTTGTCCAGGTCTTCCCTTGGTGAAAGCTTGGATGGTGTCAAGGGTTCCTTCAGCTATTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012144