BGIOSGA012149

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Revision as of 09:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012149| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012149, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA012149

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012149, complete gene.

LocusTag

OSJNBA0081P02.4

Ensembl Transcript ID

BGIOSGA012149-TA

Ensembl Protein ID

BGIOSGA012149-PA

Length

4358

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6987694..6992051

Sequence Coding Region

6987694..6987817,6989086..6989238,6989321..6989719,6989897..6989973,6990729..6992051

Genome Context

<gbrowseImage1> name=IndicaChromosome03:6987694..6992051 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:6987694..6992051 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGTGGAGGATGGCGGCGGGGTGGAGTTCCCCGTGGGGATGAAGGTGCTGGTGGTGGACGACGACCCTACATGCCTCGCCGTGCTCAAGAGGATGCTCCTCGAGTGCCGCTACGACGCGACAACTTGTTCTCAGGCTACAAGAGCATTAACTATGCTGCGAGAGAACAGGCGTGGTTTTGATGTTATAATTAGCGATGTTCATATGCCTGATATGGACGGATTCAGGTTACTTGAACTTGTTGGCCTTGAGATGGATCTCCCAGTTATTATGATGTCTGCTGATTCAAGGACAGATATCGTTATGAAAGGAATAAAACATGGAGCATGTGACTACTTAATTAAACCCGTCAGAATGGAGGAGTTGAAGAACATCTGGCAACATGTTATAAGGAAAAAGTTTAATGAAAACAAGGAGCATGAGCATTCAGGTAGCCTAGATGATACAGATCGTACCAGACCAACCAATAACGATAATGAGTATGCTTCATCTGCAAATGATGGAGCTGAAGGTAGCTGGAAGTCTCAGAAAAAGAAACGGGATAAAGATGATGACGATGGTGAATTGGAAAGTGGTGACCCTTCTTCTACATCAAAGAAACCAAGAGTTGTTTGGTCAGTTGAACTCCACCAACAATTTGTAAACGCAGTTAATCATCTGGGGATAGACAAAGCTGTTCCCAAGAAAATTTTGGAGTTGATGAATGTTCCTGGTTTAACTAGGGAAAATGTCGCCAGCCATTTGCAGAAGTTCAGATTGTATCTGAAGAGGATTGCTCAGCATCATGCCGGAATAGCTAATCCATTCTGCCCGCCTGCTTCTAGTGGTAAAGTAGGCTCACTGGGAGGACTTGATTTCCAAGCTTTGGCTGCCTCAGGTCAGATCCCTCCTCAAGCCCTGGCCGCCTTGCAGGATGAGCTCCTAGGGCGACCTACAAATAGTTTGGTATTGCCTGGAAGGGACCAGTCATCTTTACGGCTTGCTGCAGTCAAAGGAAACAAGCCCCATGGGGAGAGAGAAATAGCATTTGGTCAACCTATATACAAGTGCCAGAATAATGCATATGGGGCATTCCCTCAAAGCAGTCCAGCTGTTGGAGGAATGCCTTCATTTTCAGCTTGGCCCAATAACAAACTTGGTATGGCAGACTCAACCGGCACATTGGGAGGCATGAGTAATTCTCAGAATAGCAATATAGTCTTGCATGAATTGCAACAGCAGCCAGATGCCATGCTGTCAGGAACCCTTCACTCTCTAGATGTCAAACCTTCTGGGATAGTTATGCCTTCTCAGTCATTAAATACTTTCTCAGCCAGTGAGGGTCTCTCCCCTAATCAAAATACCTTGATGATACCTGCTCAGTCATCTGGTTTTCTAGCGGCCATGCCTCCATCCATGAAGCATGAACCTGTTCTTGCAACTTCTCAACCATCGAGTAGTCTGTTAGGTGGTATTGATTTGGTTAATCAAGCTTCAACAAGTCAGCCCTTAATAAGTGCCCATGGAGGGGGGAATCTTTCTGGCCTTGTAAATCGTAATCCAAATGTAGTACCTTCTCAAGGGATCAGTACTTTTCATACTCCAAATAATCCATATTTGGTTAGTCCAAATTCTATGGGAGTGGGCTCCAAACAACCACCTGGTGTTCTTAAGACAGAAAACTCTGACGCTCTGAACCATAGCTATGGTTATCTTGGTGGTAGCAACCCCCCTATGGACTCTGGCTTACTCTCTTCACAATCAAAAAATACACAGTTTGGTTTACTGGGTCAGGATGACATCACTGGTAGCTGGTCGCCTCTGCCGAATGTTGACAGTTATGGTAATACTGTTGGGCTAAGCCACCCTGGGTCCAGTTCATCTAGTTTTCAAAGTTCTAATGTGGCTCTTGGGAAATTGCCTGATCAAGGGCGAGGAAAGAATCATGGATTTGTTGGTAAAGGTACTTGCATTCCAAGCCGCTTTGCAGTGGATGAGATTGAATCTCCAACTAACAACTTGAGTCACAGCATTGGAAGCAGTGGAGATATTATGAGCCCTGATATTTTCGGATTTAGTGGACAGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPVEDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQHHAGIANPFCPPASSGKVGSLGGLDFQALAASGQIPPQALAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNKPHGEREIAFGQPIYKCQNNAYGAFPQSSPAVGGMPSFSAWPNNKLGMADSTGTLGGMSNSQNSNIVLHELQQQPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSASEGLSPNQNTLMIPAQSSGFLAAMPPSMKHEPVLATSQPSSSLLGGIDLVNQASTSQPLISAHGGGNLSGLVNRNPNVVPSQGISTFHTPNNPYLVSPNSMGVGSKQPPGVLKTENSDALNHSYGYLGGSNPPMDSGLLSSQSKNTQFGLLGQDDITGSWSPLPNVDSYGNTVGLSHPGSSSSSFQSSNVALGKLPDQGRGKNHGFVGKGTCIPSRFAVDEIESPTNNLSHSIGSSGDIMSPDIFGFSGQM</aaseq>

Gene Sequence

<dnaseqindica>1..124#1393..1545#1628..2026#2204..2280#3036..4358#ATGGCGCCGGTGGAGGATGGCGGCGGGGTGGAGTTCCCCGTGGGGATGAAGGTGCTGGTGGTGGACGACGACCCTACATGCCTCGCCGTGCTCAAGAGGATGCTCCTCGAGTGCCGCTACGACGGTGAGCAGCTCTGCCTTCGCCTCTGCCTCTCCCGCGTTCTCTGTCCTTGTAGTCTATCGCTTGCTGTGCTGCGGTTGTGTGGGCGTGACATGATTGGTTGCGTGGAGGCGGTTGGTCGGATAAGTTTCGTTGTTTCGGTTAGTGTTTCGTGTTCCGATTTGTCTGGGGTTGGGGAGGAGTCGGCTGCTCCGTGGGTTGATTTGCTTTTCCGTGAATTCTGGGGAGTTTTTATTTTTTTCTGCACATCTCCGTTATTGGGAAATTTTGCCCTTATTGTCGGTTTTCTCAATCTGGGAATAGATTGTTGAGTTTATATAGATTAGTGATTGTATTGAAGATCTGAGCGAGTTTGCGGTGTGAAATCTGAACCGTGTTGCTAATATCTAATCCTGCCTTTTTGTTTGTGCTAATATAAGCAGTAGTTTTTAAGATTCTTATATTCTGTGGATTCATGCGGGCTTCGAATTACTATTATATCATCCCAACCTAAGACTTACAATATATTGGGAATATATCGTCGATGCTCCTAGCTTTTGTTCCCTATCCCGATAACATTTTGTTATGCCTAATGACTGTGAATTATCACCCATAGTAATGACTGCAAATTATCACGGAAAGTTTAGCTTAGGATCAGGAGTTTATTAGAGGCGCTATGCATCACCCACCTACCCCACAGTTAAGTTTTGTTGCAACAGGAACGAATACTCCAAGGATGCAATGCGGCATATCTAGGTTGCAGCCTATATAGAATCTTTGTTCTGTAAAGTGTTGCTATTCCTTTCTAGTTTCTGTTCTGGGCGCCAATAGTTCACATATGCGCATCACAGCTTAGGGGAAATAACAAATAATATAATGGGTTTATTACTGATCTATTTTTTCTTATTATATTACAGTTGATTTATTTCCTACTATAAGTTGAATGTGTGCAGCATGAGAAACTGTTGGATTTTATTCCTTATCCAGTCTTCTCTATTGAATGATCTCTGCTTTAAAACGAACGTGAAAAGCATTAGGCATACCCATGGAGGTATTCAGTATTCATAATGTAATGCAATTGTACATAAATATCATCTGCTGCTTTTATGCCTTCAAATACACTTTTAAGTTTATATCATGTTGTCTGCAGTACTTTTTCGTTGCTTTGTTTTGTTTTCACTCTGTTGTTTCCGAAAATTCCACTCTTTCGTGGGAAGCTAATATCGTAATTTGCATCTGCTTCATTTGTATGTCTGAATAGTTATTTTGTTTACTTTGTTTTTTTTGGGCAGCGACAACTTGTTCTCAGGCTACAAGAGCATTAACTATGCTGCGAGAGAACAGGCGTGGTTTTGATGTTATAATTAGCGATGTTCATATGCCTGATATGGACGGATTCAGGTTACTTGAACTTGTTGGCCTTGAGATGGATCTCCCAGTTATTAGTAAGTAGATTAATATTCTCCACCCTGCTTGTTAATTCTGGTTTGTCAAAGGCATTACTGAAATCTGTTGATAATATTGCAGTGATGTCTGCTGATTCAAGGACAGATATCGTTATGAAAGGAATAAAACATGGAGCATGTGACTACTTAATTAAACCCGTCAGAATGGAGGAGTTGAAGAACATCTGGCAACATGTTATAAGGAAAAAGTTTAATGAAAACAAGGAGCATGAGCATTCAGGTAGCCTAGATGATACAGATCGTACCAGACCAACCAATAACGATAATGAGTATGCTTCATCTGCAAATGATGGAGCTGAAGGTAGCTGGAAGTCTCAGAAAAAGAAACGGGATAAAGATGATGACGATGGTGAATTGGAAAGTGGTGACCCTTCTTCTACATCAAAGAAACCAAGAGTTGTTTGGTCAGTTGAACTCCACCAACAATTTGTAAACGCAGTTAATCATCTGGGGATAGACAGTAAGTTTTTCCTACTTTTGGCACTTATTTTCATCAACAGCAATGTTTGGTCGGCTGTGCACTTGCTAATTTATTTTTCTTTTGGTGTTGTTTACCACATTTGAACACCTGAACCTTGCAATTACATCAAATCTTTCCGCTTTCAAGCTTACACAAATTTTATAATTTTCTCTTCAGAAGCTGTTCCCAAGAAAATTTTGGAGTTGATGAATGTTCCTGGTTTAACTAGGGAAAATGTCGCCAGCCATTTGCAGGTTTGATTCTGGTTTTCATTTTTAATCACGGGTCCTTTTTCTTGTATCATATTTAGCATGGTGTGGTGGATGTTATGTTTACTGACACCATGGAATATCTACCCTTTTGTATTATCCTAATTGTTATTATTCGTATTTATTTTACACATCCTTGCTCTACCTGAATGTATCTACTCTGATTTAGTTAGCAGTAGAAACCAACTAACCAAAGGACTTGCTCCTGGAATGATCTTGTAATTCCAGGGACTTGTACATACACTATTTTAGTGCTGTTACACTCTTTTATTGTAGAATGAAACCATACCAAATTATAGATCATTCAACCAGTGCAGATGGCAACGAATCGCTCTATAATAGATGTTTGATAATAAACATTGTTTTTCTGTTGTTCTTATTGTGTTGCCTGGGGATCATCCATTTGAAGGTTTTGTCTACAGAGTAAAATTCCATCGGTTACCTTGTGCATTTGTGCTGCTTGTCTGTTGAGCTCCAATCTCCCTGTTACCTTCATTTTTTTAATATATACCAGGACCTGTTTAAGTGCTTAGTTCAATAGTCATGATATACAGTAGCTTAGACCCTGTTTGAACTCAGGACGTCCCTAAGTTATCTTGAAACAATGTCGTTTTTCTTGGGCATATTGAAGTTGCTGAAACAGTAATGAAGTATCTGTTTGCTCTTGCTGTAACTTCCAGTTTTTTAGTTATGTAATGATAATCATGGTGATGCAATGAGTTTTTTTTTTCTATTTTCAGAAGTTCAGATTGTATCTGAAGAGGATTGCTCAGCATCATGCCGGAATAGCTAATCCATTCTGCCCGCCTGCTTCTAGTGGTAAAGTAGGCTCACTGGGAGGACTTGATTTCCAAGCTTTGGCTGCCTCAGGTCAGATCCCTCCTCAAGCCCTGGCCGCCTTGCAGGATGAGCTCCTAGGGCGACCTACAAATAGTTTGGTATTGCCTGGAAGGGACCAGTCATCTTTACGGCTTGCTGCAGTCAAAGGAAACAAGCCCCATGGGGAGAGAGAAATAGCATTTGGTCAACCTATATACAAGTGCCAGAATAATGCATATGGGGCATTCCCTCAAAGCAGTCCAGCTGTTGGAGGAATGCCTTCATTTTCAGCTTGGCCCAATAACAAACTTGGTATGGCAGACTCAACCGGCACATTGGGAGGCATGAGTAATTCTCAGAATAGCAATATAGTCTTGCATGAATTGCAACAGCAGCCAGATGCCATGCTGTCAGGAACCCTTCACTCTCTAGATGTCAAACCTTCTGGGATAGTTATGCCTTCTCAGTCATTAAATACTTTCTCAGCCAGTGAGGGTCTCTCCCCTAATCAAAATACCTTGATGATACCTGCTCAGTCATCTGGTTTTCTAGCGGCCATGCCTCCATCCATGAAGCATGAACCTGTTCTTGCAACTTCTCAACCATCGAGTAGTCTGTTAGGTGGTATTGATTTGGTTAATCAAGCTTCAACAAGTCAGCCCTTAATAAGTGCCCATGGAGGGGGGAATCTTTCTGGCCTTGTAAATCGTAATCCAAATGTAGTACCTTCTCAAGGGATCAGTACTTTTCATACTCCAAATAATCCATATTTGGTTAGTCCAAATTCTATGGGAGTGGGCTCCAAACAACCACCTGGTGTTCTTAAGACAGAAAACTCTGACGCTCTGAACCATAGCTATGGTTATCTTGGTGGTAGCAACCCCCCTATGGACTCTGGCTTACTCTCTTCACAATCAAAAAATACACAGTTTGGTTTACTGGGTCAGGATGACATCACTGGTAGCTGGTCGCCTCTGCCGAATGTTGACAGTTATGGTAATACTGTTGGGCTAAGCCACCCTGGGTCCAGTTCATCTAGTTTTCAAAGTTCTAATGTGGCTCTTGGGAAATTGCCTGATCAAGGGCGAGGAAAGAATCATGGATTTGTTGGTAAAGGTACTTGCATTCCAAGCCGCTTTGCAGTGGATGAGATTGAATCTCCAACTAACAACTTGAGTCACAGCATTGGAAGCAGTGGAGATATTATGAGCCCTGATATTTTCGGATTTAGTGGACAGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012149