BGIOSGA012207

From RiceWiki
Revision as of 09:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012207| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012207, complete gene.| tag = OS03G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012207

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012207, complete gene.

LocusTag

OS03G0241100

Ensembl Transcript ID

BGIOSGA012207-TA

Ensembl Protein ID

BGIOSGA012207-PA

Length

5029

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8000926..8005954

Sequence Coding Region

8000926..8001021,8001123..8001170,8002283..8002392,8003050..8003134,8003238..8003514
,8003695..8003853,8003962..8004065,8004329..8004567,8004664..8004982
,8005064..8005468,8005556..8005693,8005775..8005954

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8000926..8005954 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8000926..8005954 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCTCGTTAGATCCGCCCCTGCCCGGCAATGGGCAGCATGGACACGCCAAGAGGAACAAAATTTTTTCAATGCGCTGCGCCAAGTAGGGAAGAATTTTGAGAAGATTACGCTGCGTGTCCAGAGCAAAAGCAAAGATCAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTCGGTCCTGAGTTCTCGCTCGATGCAAAAAATTCCAAGGACACCATTGCTGCTATGCTCTGCTGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACTTTCGTAGAAGCATTGGGAAATCAACTACTAAAGGATAGAAATAAAACCAGAAAAAAGTGTCCACGTGGGGATGTGTGCCTGTCCTCTTCATCTTCGGCTGTCAACAGGACTCCTGGAAATGAATCTTTCTCAGTAAAACTCTTGGCTGTGGATGTCTCCAATGGTAGCAAAGTAGGATCTTCTAAAGGGTCATTTTTCAAAAAGGTCACAGAACCAAATTGCAGTAACAAGTCAGGTGCAACTAAAGGGGACCTCTCCGCCACAAGAACTGTGAAACAGAAAAGAAGAGCAGGTGGTGTTGTTGCATCTGCTGCATATAAAAAATGGGAGAGAGCTGCCATGGCTGGTGTTTCTTTGGTTGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTGAACGCTGATGCAAGAATGTTATCTCCATCATCAAGCAATGCCTGCACAGTTGATGGTCTTGGCACAAATCATATAAAGGAAGCAGATCAACAAGCACCTGCAAAGCTAAAGTTGCAGCTATTTCCAATAAATGAAGCTACACGAAAGGCATTAGAGAAGGATGAACATAATCCACATCTGGAACTCACATTAAGTGCTAGGAAAAAAATATCATCAGTACTAGAACATTTGAACCGCAAGTGGGGCAACTCAAACATTGCATCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCATCAAGAAGATTTAGCTACATATCAGAGGTGGACCACAAAAGATACTGTCGCAGTGGCTGACGTTTTCCGTTCTGTGAATAGCCCATCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGCAGGCGTAAGTGAAATATCTTTGACTCATTTTGAGAATTGCTTGATACCTGAAGACATCCATGCCAAATCTCCCTCAGAGGCTTGTGTGCAAAAGGATGGTAATTCGCTCAGTAGTTGTGCTCCTGAGCAACACCCTTGTGGTTCGAAAGATCAGTCAGCATTATTGCTTGCTATGCCATCTAGTACAGGCAAGAGTGCTCAGGTGCCAGAGCAGTGCATTGATGTTCTCCCCTCACAGTTTGGCAGGCAGAATCAAGACCAAGTTACCACGAACCAAGTTTTTGAGGTTGATCAAGGGATGGATTGTGCTGCAGTATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTGACAGAAGCTTCCAGAGGTGCTAATACTGATTGTCCAGGGACATCTGTTGTCAAAAACACACTGTTGCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCATGCTTCTCGTTATAAATCAGCAGAGCAGCCAGCCCTTGCATCCCATTCAACCATCTGGGGTGCTGAAGAAACCTGTGACGCATTCAGTTTTAACCTACCAGCATCTAGGAAGCGAGAAGGTTCAAATAATTCAGCTAGCAGCTCTCCCGATAGTGACAGTGATGTTCATCCTTCAAACTCAGAAGGGTTTCAATGTTTTCTTCAGGACTTAGCTGGAGCGGCGGTTGCTCATAATCCTTGTATTGACGATGCCAAAGATATAGAGTCACTTTGTGCTGAATCGCCACCTCGAAGTGACCACGATTCTGCTCCGAAGGATCAATCTCTAGCTGACTTATACTGGCCTGATTCACTTGGACCATTGGACTTGGACATACCGTCCGCGACATACCATGCTGATGACTTACTCCTAGGGGACAGCCAGAATAGTTGGAACCGCATGATGGCGAATAGCCTGGATGCATTTCGAAACCTGTCGTTCTTCACGGCAGATAAGAATGACTCGATACCATCCATCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MSLVRSAPARQWAAWTRQEEQNFFNALRQVGKNFEKITLRVQSKSKDQVRHYYYRLVRRMKKLLGPEFSLDAKNSKDTIAAMLCWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKTRKKCPRGDVCLSSSSSAVNRTPGNESFSVKLLAVDVSNGSKVGSSKGSFFKKVTEPNCSNKSGATKGDLSATRTVKQKRRAGGVVASAAYKKWERAAMAGVSLVADAAEELERNTVNADARMLSPSSSNACTVDGLGTNHIKEADQQAPAKLKLQLFPINEATRKALEKDEHNPHLELTLSARKKISSVLEHLNRKWGNSNIASGELLLFPYCAHQEDLATYQRWTTKDTVAVADVFRSVNSPSVFRLRYGWFSLAELEAGVSEISLTHFENCLIPEDIHAKSPSEACVQKDGNSLSSCAPEQHPCGSKDQSALLLAMPSSTGKSAQVPEQCIDVLPSQFGRQNQDQVTTNQVFEVDQGMDCAAVSEGEWADTLTDISVGYLLTEASRGANTDCPGTSVVKNTLLLENPCSYDSFDAAVALHASRYKSAEQPALASHSTIWGAEETCDAFSFNLPASRKREGSNNSASSSPDSDSDVHPSNSEGFQCFLQDLAGAAVAHNPCIDDAKDIESLCAESPPRSDHDSAPKDQSLADLYWPDSLGPLDLDIPSATYHADDLLLGDSQNSWNRMMANSLDAFRNLSFFTADKNDSIPSIM</aaseq>

Gene Sequence

<dnaseqindica>1..96#198..245#1358..1467#2125..2209#2313..2589#2770..2928#3037..3140#3404..3642#3739..4057#4139..4543#4631..4768#4850..5029#ATGTCCCTCGTTAGATCCGCCCCTGCCCGGCAATGGGCAGCATGGACACGCCAAGAGGAACAAAATTTTTTCAATGCGCTGCGCCAAGTAGGGAAGGTAAGACACATACGTTCTTGATGCAATGTTGTGCTGTTCTTGCGAATTACTGCGTTTGTGCACTAATCGATTGATGCGTGATGTCTTGTCCTTTGTGTCAGAATTTTGAGAAGATTACGCTGCGTGTCCAGAGCAAAAGCAAAGATCAGGTACACCATCTTCAGACAAGAACTATTTTATGATGTTTAATTTCTGTTATTAACAAATTAGGAATTTAAAGCAGAGGTCGATATGTTTAGATCGTAAATTTAGTACGCCTTTATGATACTTGTCATTATTTATTTAACTGATTACCCGGGGTCTTCTGGCTAGCATCACAAGGTGGTGGTCTAGCCGGTCAGGGTTCGAGCCTCATTCCTCTTAATAAATTCCGATATAAGAGCCCCTCCTCTCATATCCAACGTTATTTAACTGATTAGGAAAGTCGAAGGAGAGGAAGATTCGCATTAGGCAGTAAATTTTAATTCTATGAACTGTTGTAAAGGACTTTCCCTTCGACGGGATGTCAATTAGAGTTGAGTAAATGAATTTTACGTTGAGAAAAAAGATTACAAGTAACCGGCGTAGGGAAACTACATTTCCAAATATGGCCTTTGTTGTTGCTTGACATAGTACCAGTATCCCTTCAGCATATACATACCATTTCCGTTGATTTCGTGGGAGAAGGGTGAGTGGATTGCAATCTCCATCCTTGCATTCCCATCAGGATTAGGTACTTTCACTTGCAGCAGATCTCTCTTCCTGACTTGCTGTTACATACAACTGATTCGACTTATTTTCCATCCTTAAGTTTGTATAGGTGATGCTGTTATGGGCAACTCCAACTTTCGAGCATGGTGCAAAGAACCGGCACTAAGTTTTGTTTAGGTTTAGTTGTATCTTAGTACTATCCCCTTGGATAGATAGAATGAAGTGAGGTACTTTCCTCACCATCTTAGCACAAGCCTTATAGCACAAGTCGCACACCTCACCTAATATGCTGCACCTGGAATAGCTTGAGGAATTTTCCCACAGTGCGTGTTGCCTGATCGTCTAAGTGTTCCCTGTGAACTACGATGTGTATGCTTTAAAGCGGTAAACACCAAAAGGTCAAAACAGTTCTCTCTACGACAATTGATTGTCTTTTACACCATCATATGGGTAGCATAATTTGTAACAGATGCTTCATTGTATATAAACAATATTTGCATAAACTAGAGAACACCTGAATGTCTGCCATTGGCATGAAGATTCACTGTATTTTCAACTTTTCACATTACAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTCGGTCCTGAGTTCTCGCTCGATGCAAAAAATTCCAAGGACACCATTGCTGCTATGCTCTGCTGGTAATTAAATGAATCCCTACGTGCAAATCAATCTGATTAGGTGTGCTTTAAGCTTCTTGTTCTATTAATTTATATATATAGCATGATTGCAAAAGGTAGTATTTGATCTCACAATATCGCTGAGGTATCTTTGCGATATATATTCTTTTCCTAGTAGGCTAAGAACGCACATACCTTATCTTTTTAGTTTATAGAGGACGAGGCTATAATTTTATTTTACCTTATTACAGTTATGGGTCACTGCTGTAATACCTAGAGTGCTAGAACTATTGGGCCTTCATGCTGATATTGTGTATACACCTTATCATGTTTGGTGCCTATATTTTAAAACTGTCAGAACTGTTCAATCAAAATGGTTTCTGAGCTTTGGAAAAAAAAATCATATTTCTGAGTTCAGAATATGATTCTGAACAAAGAAAAAGTCTTTTGATGACAAAAATTGCACAACTGAGAATGTACTTTTACGATTAGGAGTGCTTGGATCAGCAGGGAGGGCTTTTAATATTTTTTATTCTGATGCAGAATGCCCTCTTGTCTATGTGCAAGATGGGAGAGAATACCGTTTGTTGCTTATTGTTATTGCTTTTGATTTGATCCTATGATGCTTCCTTTTACACTGCATGGAAAACTCTCAGATACTAACTTGGTTTTATGCAGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACTTTCGTAGAAGCATTGGTTTGTTACAGCACTTGTTATTCTCCCAGCTTTTCATAATTGTAGGAACTGTTCTTTTTTTTTATTTAGTTTTTTTTCTCATGTGATATATCCAACTTTATAGGGAAATCAACTACTAAAGGATAGAAATAAAACCAGAAAAAAGTGTCCACGTGGGGATGTGTGCCTGTCCTCTTCATCTTCGGCTGTCAACAGGACTCCTGGAAATGAATCTTTCTCAGTAAAACTCTTGGCTGTGGATGTCTCCAATGGTAGCAAAGTAGGATCTTCTAAAGGGTCATTTTTCAAAAAGGTCACAGAACCAAATTGCAGTAACAAGTCAGGTGCAACTAAAGGGGACCTCTCCGCCACAAGAACTGTGAAACAGAAAAGAAGAGCAGGTTACAATGCCATTTTTCTTTTGGTTTGATATGGTTTAGCTTACTCATATTTTGTCTTATGCAATATGCAGTTTGTATGTTTTAGCAGCTAAGCCTTGACAATAAAATATATTATATGAAGACCATATAGTGTTGAGCTTTCCTCACATTAGTTTTGAGAGCAGCTGACCTGTGTTTTAGGTGGTGTTGTTGCATCTGCTGCATATAAAAAATGGGAGAGAGCTGCCATGGCTGGTGTTTCTTTGGTTGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTGAACGCTGATGCAAGAATGTTATCTCCATCATCAAGCAATGCCTGCACAGTTGATGGTACTATTTCATACCATTGCTTTGTACTTCCTATATTTACTACACTATGTTTCTATGCTTTCTTGACTATAAATGGCTGGGTCTTGATGTTTTATTCTACATTGGTAGGTCTTGGCACAAATCATATAAAGGAAGCAGATCAACAAGCACCTGCAAAGCTAAAGTTGCAGCTATTTCCAATAAATGAAGCTACACGAAAGGCATTAGAGAAGGTAAATATGTCTCTTTGTTGCTAGCAAACTGCAATATGAAATTATGAATCACAGTGCTGTAGGTTAACTATTGGCTCAAACACTCAGATCCCTGTGGTTGATAAAATTTCTTCTGATAAATGGAATCAAACGGAACGTGGAGCACAAATAACCTGATTAGGGCTTTTGCGTTATGAATTTTCTATCGTGTCTGATATATTCTGTTCAGTTTTCATATGTTAGCAGTTTGGACATGATATGACAGTCCTGTCTCTTTTTGACAGGATGAACATAATCCACATCTGGAACTCACATTAAGTGCTAGGAAAAAAATATCATCAGTACTAGAACATTTGAACCGCAAGTGGGGCAACTCAAACATTGCATCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCATCAAGAAGATTTAGCTACATATCAGAGGTGGACCACAAAAGATACTGTCGCAGTGGCTGACGTTTTCCGTTCTGTGAATAGCCCATCTGTTTTTCGATTAAGGTACGGATTTTCAGTGTAGTAAACGAATTATAATATTGTAATACATGGGGCAATAATAACAAATACTAACTGTTGTTCCAACTTTTTGTCAATAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGCAGGCGTAAGTGAAATATCTTTGACTCATTTTGAGAATTGCTTGATACCTGAAGACATCCATGCCAAATCTCCCTCAGAGGCTTGTGTGCAAAAGGATGGTAATTCGCTCAGTAGTTGTGCTCCTGAGCAACACCCTTGTGGTTCGAAAGATCAGTCAGCATTATTGCTTGCTATGCCATCTAGTACAGGCAAGAGTGCTCAGGTGCCAGAGCAGTGCATTGATGTTCTCCCCTCACAGTTTGGCAGGCAGAATCAAGACCAAGTTACCACGAACCAAGTTTTTGAGGTACTACAGTTTTGTGCATACTTTTGTCAAGTGAACATTCCAGTGATAATCGTGTATCTTCTAATTGTTTCTGTACTTCAGGTTGATCAAGGGATGGATTGTGCTGCAGTATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTGACAGAAGCTTCCAGAGGTGCTAATACTGATTGTCCAGGGACATCTGTTGTCAAAAACACACTGTTGCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCATGCTTCTCGTTATAAATCAGCAGAGCAGCCAGCCCTTGCATCCCATTCAACCATCTGGGGTGCTGAAGAAACCTGTGACGCATTCAGTTTTAACCTACCAGCATCTAGGAAGCGAGAAGGTTCAAATAATTCAGCTAGCAGCTCTCCCGATAGTGACAGTGATGTTCATCCTTCAAACTCAGAAGGGTTTCAATGTTTTCTTCAGGTTTGTTCCATTTATTGATCCAACCTAGAATAATAAACATTTTTTTATACATAGTATTGTTAATTTATGACTTATTTGGTGTTGCAGGACTTAGCTGGAGCGGCGGTTGCTCATAATCCTTGTATTGACGATGCCAAAGATATAGAGTCACTTTGTGCTGAATCGCCACCTCGAAGTGACCACGATTCTGCTCCGAAGGATCAATCTCTAGCTGACTTATACTGGGTACTATACAAATGTCCTATCCATACCTGTTTTCTTTTCATGGTGTAATGCTCATAACTAAACAATCTTCTCTCCTGACAGCCTGATTCACTTGGACCATTGGACTTGGACATACCGTCCGCGACATACCATGCTGATGACTTACTCCTAGGGGACAGCCAGAATAGTTGGAACCGCATGATGGCGAATAGCCTGGATGCATTTCGAAACCTGTCGTTCTTCACGGCAGATAAGAATGACTCGATACCATCCATCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012207

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012207&oldid=57030"