BGIOSGA012212

From RiceWiki
Revision as of 09:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012212| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012212, complete gene.| tag = OsI_107...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012212

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012212, complete gene.

LocusTag

OsI_10708

Ensembl Transcript ID

BGIOSGA012212-TA

Ensembl Protein ID

BGIOSGA012212-PA

Length

2900

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8060549..8063448

Sequence Coding Region

8060549..8060657,8061331..8061453,8061697..8061788,8061871..8062012,8062351..8062655
,8062846..8062899,8062979..8063106,8063262..8063448

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8060549..8063448 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8060549..8063448 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTTGGAAGGACAACGGCGGACGGAGCAGCGGCGGCGGCGGCGGGCTGGAGCAGAACGGCGTGGGCCCCTTCGGCCAAGTGCGCGTCCTCGTCGTCGGCGATTCAGTTCTCCAATTATTCACCAAGAAGGTGTGCTCAGTGCTCACTAACCTTGGATGGAATTGCGCCATTTTTCTTTCTCTGAAAACGTGGGATACCAAGGAGGAACTTGGTACCAAAGAGGCAGTAGGTGTTGGGAAATCCTCTTTGGTGCATCTCATTTTAAAGGGTTCTGCTATTGCTCGACCTGCCCAGACAGTAGGATGTGCGGTTGGCGTTAAACATATTACTTATGGAAGTGCAGGCGGTTCTTCTAATAACATCATCAGCGACGTTCAAAGGAACTTCTTTGTTGAGCTTTGGGATGTTTCAGGACATGAGCGCTACAGAACATGCCGTTCAATTTTCTATACACAAATTAATGGTGTCATATTTGTTTATGACCTCTCTCAGAGGAAGACCAAAACAAATTTGAATAAATGGGCAGTTGAAGTTGCTGAAACTGGCACCTTTTCTGCTCCACTCGGATCTGGTGGACCAGGTGGGCTTCCAGTGCCTTACCTTGTAATTGCTAATAAAGTGGATCTTGTTCCGAGAGATGGTTCTAGAGTTAGCAGTGGAAGTCTTGTTGATTTTGCTCGTCAGTGGGTTGAGAAACAGGGCCTGCTTCCTAGTAGTGAAGAACTTCCACTCACAGATAGCTTTCCTGGGAACTCTGGTCTCCTCTCGGCTGCCAAAGAAGCAAGATATGACAAAGAAGCCGTGATCAAGTTTTTCCGCATGTTGATTAGGAGAAGATTTTTCTCAAATGAGCCTGCTGCCCCGAGTCCCTGGTCTCTCACTCCGAGAGAAGATAGCATCCTTCCTGTAGAGACTCTCAAAGACGAAGTTGATAGCTTTCAAAGGAAAAGCGGCGAGGACTTCATGTACAAGGGAGTAAACCCGCTGCCTGCACAGAGGAACCTCGCATCGCCACCAGATCTCAGTCCACAGCAACCGGTGTTCTCTTTAGATAACTACAGATATCACAGATACTCCTCGCCGTCGCTTCCTGATGTGAGCAGCAGTAGAACAAGCCGAGAGGATATCGATGTATAG</cdnaseq>

Protein Sequence

<aaseq>MFWKDNGGRSSGGGGGLEQNGVGPFGQVRVLVVGDSVLQLFTKKVCSVLTNLGWNCAIFLSLKTWDTKEELGTKEAVGVGKSSLVHLILKGSAIARPAQTVGCAVGVKHITYGSAGGSSNNIISDVQRNFFVELWDVSGHERYRTCRSIFYTQINGVIFVYDLSQRKTKTNLNKWAVEVAETGTFSAPLGSGGPGGLPVPYLVIANKVDLVPRDGSRVSSGSLVDFARQWVEKQGLLPSSEELPLTDSFPGNSGLLSAAKEARYDKEAVIKFFRMLIRRRFFSNEPAAPSPWSLTPREDSILPVETLKDEVDSFQRKSGEDFMYKGVNPLPAQRNLASPPDLSPQQPVFSLDNYRYHRYSSPSLPDVSSSRTSREDIDV</aaseq>

Gene Sequence

<dnaseqindica>1..109#783..905#1149..1240#1323..1464#1803..2107#2298..2351#2431..2558#2714..2900#ATGTTTTGGAAGGACAACGGCGGACGGAGCAGCGGCGGCGGCGGCGGGCTGGAGCAGAACGGCGTGGGCCCCTTCGGCCAAGTGCGCGTCCTCGTCGTCGGCGATTCAGGTCTGTTCCGTCGTGACCCCCCCTTTCGTTGATCTGCGAACTCTCCGAACCTGATACCTGTCAAATCCATGTCTCGCTGAACTCAGTGGAAACAAGTAGGGAACGCCATTAGGACGTCGCGGGGATGATGATTGTGATCCACTGTGAATTGTCTGTTTAGGTGGTGCAAGGGACGAAGAGGGATAGTGGCTTGGTATGAAGTGAATTTTGCATTTTGATGAATTCGGTTAGCCTTGCCTGTTTGTATGTGAGGGGATTTGAGCTAGGCTTTTTGTGCACGGATATTAACAAGACCAATGTAGTGGAAAACAAACAAGGTGCATTTGTTTGACTAGCTAGAAACCAGAAAGGAAATCGTCAGTCCGTCATCATGCCGAGTTAGTGAAATCCAACTCCTGTGGGAGGAAACTGTGGTCCCATCAATACATCGTCATACAGAGTTAGTGAAATCCTACTCTTGTAGGAAAAAAGAATTTATGAATCCATCATAACATCATCATCATTACATCGTCATGCAGAGTTAGTGAAATCCTACTCTTGTGGGAAAAGAAATTATGAACCCATCATTACATCGTCGTGCAGAGTTGGTGAAATCTTACAAGAGTAGGAAAGGAAACCATCAATCAATCATCATGCAGAGATACAAGAGTTGAAATGTTTTTTGGCTGTTCAGTTCTCCAATTATTCACCAAGAAGGTGTGCTCAGTGCTCACTAACCTTGGATGGAATTGCGCCATTTTTCTTTCTCTGAAAACGTGGGATACCAAGGAGGAACTTGGTACCAAAGAGGCAGTAGGTATGTTATCTACCCAACATTTAGTCCAGGTGGAAATAGTGAGCCTATTGAGACACAGTAGACCAAGCATCATGTGGGACTGAATTTTCTATGTGGCCTTTCACTGAATGTACTGTTCTCTCGTGGATGGTACTATGTTGCATATAACTGAAATGAATGCACTATAGCTGGCATGTACTTGTGCATTGCTGACTATAGTTCTCCAGATGTATACATTGTCATTATTCCATTTTACCTTCTCAGGTGTTGGGAAATCCTCTTTGGTGCATCTCATTTTAAAGGGTTCTGCTATTGCTCGACCTGCCCAGACAGTAGGATGTGCGGTTGGCGTTAAAGTAGGCACTCTGGCTCTGTACTTTCCTCAATTGCACCTTTTGCTATTTGTATCTGCTTACATTTTTACTGTTATCATTTCAGCATATTACTTATGGAAGTGCAGGCGGTTCTTCTAATAACATCATCAGCGACGTTCAAAGGAACTTCTTTGTTGAGCTTTGGGATGTTTCAGGACATGAGCGCTACAGAACATGCCGTTCAATTTTCTATACACAAATTAATGGTAAATGTCATGTGACTCTCTCTTTATTACCAGCATATTACTGTCCTGCATCTATGTACCCATTGGAGCCCCTTTATTGCTTTTTTTTTCACAGGTATCCATTTATTGTTTGAAACTTGAATATGTTCACATGAAGCCCAAATTTTAGTTGTCGCGTGTTATCGAGCAGCAACTCTAGTTTTATCTCTACTTCAATTTGTTTCCCAGTATGTACTTCAGCAGGAGAAACCACTAGAGAAAGCTGTCTATATCAGATCCTTGACCCAAACTCTTAATGTGTTTCCTATCGATCAATATTAACAATTTAGTACACTCATTGTTTCATTTATTATCATCAGGTGTCATATTTGTTTATGACCTCTCTCAGAGGAAGACCAAAACAAATTTGAATAAATGGGCAGTTGAAGTTGCTGAAACTGGCACCTTTTCTGCTCCACTCGGATCTGGTGGACCAGGTGGGCTTCCAGTGCCTTACCTTGTAATTGCTAATAAAGTGGATCTTGTTCCGAGAGATGGTTCTAGAGTTAGCAGTGGAAGTCTTGTTGATTTTGCTCGTCAGTGGGTTGAGAAACAGGGCCTGCTTCCTAGTAGTGAAGAACTTCCACTCACAGATAGCTTTCCTGGGAACTCTGGTCTCCTCTCGGTTAGATTCTCTTCTTGCCACATACTAAAGTTCTTGCAAATCATTCTCTTATGTAATTGTAGCAATCAAGATCCATTACTAAGTAATGGTTTGGGTAGAGGAAAACATTAAAGATTCTTATTGGTAGGGTCTGCACAATGTTACTCTGAGCTAGTTCTTGTGTGTTTAAGTCGATTTCTGATTATTGCAGGCTGCCAAAGAAGCAAGATATGACAAAGAAGCCGTGATCAAGTTTTTCCGCATGGTTTGTTTAGAATTAACACACTGATTTTTTCCTCCCTCTATGTTTTCATCTGCTAATGCTGTTGAAATGCATCTTTCAGTTGATTAGGAGAAGATTTTTCTCAAATGAGCCTGCTGCCCCGAGTCCCTGGTCTCTCACTCCGAGAGAAGATAGCATCCTTCCTGTAGAGACTCTCAAAGACGAAGTTGATAGCTTTCAAAGGAAAAGGTGCGTGCCTAAACATGAAATTCACACATAACAACAATTCAAAAGGTCGAAAGCAAAGCAGAATATAACTTGAGATATAATCATGGCATCAATAGCGAACCGGATGCTAACGAAACACAATAAGCTCTTACGTGCACAATACTTTGCAACTACAGCGGCGAGGACTTCATGTACAAGGGAGTAAACCCGCTGCCTGCACAGAGGAACCTCGCATCGCCACCAGATCTCAGTCCACAGCAACCGGTGTTCTCTTTAGATAACTACAGATATCACAGATACTCCTCGCCGTCGCTTCCTGATGTGAGCAGCAGTAGAACAAGCCGAGAGGATATCGATGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012212