BGIOSGA012215

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Revision as of 09:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012215| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012215, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012215

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012215, complete gene.

LocusTag

OS03G0243700

Ensembl Transcript ID

BGIOSGA012215-TA

Ensembl Protein ID

BGIOSGA012215-PA

Length

3603

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8125420..8129022

Sequence Coding Region

8125420..8125837,8125939..8126088,8126208..8126239,8127075..8127231,8127342..8127514
,8127646..8127747,8127827..8127973,8128048..8129022

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8125420..8129022 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8125420..8129022 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTCTGCTTTAAGGCACACACCGACCCAGCAATTCATCAATGCCGGGAGAAAACAACAGGAGAAACTTCGAGGCCTGCAGTGCAAGCCAGTACAATTCCCATGGCACGAGAGCGGTACGAGACAACAGAACAGGGCGAGAAATTGTTCACAGGACCTGAGCTTGTTTTACTGGGGTTACCGCAAGCAACAGCCTCGCTCGCTCGCTCGGTTTCGCATAGCTCGCATGTGAACCACCAGGCGAACAGGAGGTGTTGGCTAGGCCCGGTGTTTGAGCACCACAAGGGCACTGCACCAAACCGCTTCCTTGAAGAGGCGGCCAGCGCCGAGGACCAGGTGCACGCGCATGGTGGGCGCCCATGCCATGGCGCAGGCCAGCCCGTGAACCCCCGCCACGCCAATGGCATCGCGCCAATTCAGCTCGCCATTGCTAAGCCTGAAAGCTTCCTTCGTAGCGCACTTGGGAGCTGGAAGATGAGGAGGTTTTCTCTACATGCCGTGAGATATCTCGTGCTGTGGATGCTGCTGCGGTGTGGCCGTGAGCTCGTTGCAGCGGTGCCTCCTGATGGCTGGTACGATTACACTGCATACACCGACTGCAGAGGGCAGCCGGAGCCGGCGCTGTACAACGGAGGGATTCTGAGGTTCGGCAACAGCGACGACCCGACCGGCTACCGCACGACGGAGACCGGCGTCTTCTCGCCGGCGTTCGTGGTCTACAACCTCAACAAGACCACCATGTACACCTTCTCAAGCTGGGTCAAGCTGGAAGGCGCGTCCTCTGCTCTGATCACGGCGAGGCTTGCGCTGGACAACGCCGGCGCGCGGTGCATCGGCACGGTTCTCGCGAGGAACGACTGCTGGGCCTTCCTCAAGGGCGGCTTCGTCCTCGACTGGCCAACACAAACCTCAGTTATATTTTTTCAGAATGCTGACAAGACCCCTATGAAGATCACGGTCGCGAGCGGTTCGCTTCAGCCGTTCACGTCGGATCAGTGGTCCATGCACCAGAAAGACACGATCCGGAAGAGGAGGAAGCGGATGGCTACCATCCACGTTGCCGATCAGCAAGGCGGCCGCGTGGTTGGCGCGTCCGTGTCCGTGAGACAAACCGCCAAGGACTTCCCGTTCGGCTCGGCCATCGCCTCCACCATCTTGGGGAACCAAGCCTATCAGAAATGGTTCGTGGATCGGTTCAACGCGGCGGTGTTCGAGGACGAGCTGAAGTGGTACTCTACGGAGCCCATGTCGGGGCAGCTGCGGTTCGACGTGCCGGACCAGATGCTGGCGTTCGTGCGGTCGCACCGCGTGATGGTGCGAGGGCACAACATCTTCTGGGAGAACCAGGACGCGACGCCGAGCTGGGTGAAGGGCCTGTCACCGGACGACCTCCGCGCCGCCGTCAACGGCCGGATCCAGAACCTGATGACCCGCTACCGCGGCGAGTTCGCGCACTGGGACGTGAACAACGAGATGCTGCACTACAACTTCTACGAGCAGCGGCTGGGCGCCAACGCGTCGGTGGAGTTCTTCAGCGTGGCGCAGGACGCCGACCCGCTCGCCACGCTCTTCATGAACGAGTTCAACGTGATCGAGACCTGCGACGACGTGTCCTCCACCGTGGACACGTACGTGGCGAAGCTCAAGGACCTCCGCGCGGGGGGCGCCGTCCTGGAGGGCATCGGCCTGGAGGGACACTTCCTCAAGCCCAACATCCCGCTCATGCGCGCCGTGCTCGACAAGCTCGCCACGCTCGGCCTGCCCATCTGGTTCACCGAGATCGACATCAGCAACCGGTACGACGCGCAGACGCAGGCCGTCTACCTGGAGCAGGTGCTCAGGGAGGCGTACTCCCACCCGGCCGTCACCGGCGTCATGCTGTGGACGGCGCTGCACCCCAACGGATGCTACCAGATGTGCCTCACCGACTGGAACCTCAACAACCTCCCCGTCGGAGACGTCGTCGACCGCCTCCTGCAGGAGTGGCAGACGGGGCAGGCCGCCGGCCCGACCGACGCGCACGGCGCCTACAGCTTCAGCGGATTCCTCGGGGAGTACATCGTCTCCGTCACCTACGCCAACAGCACGTCGCAGGCCACCTTCTCGCTCTCTCCCGGCGACGAGACCAGGCACATCAACATCCAGATATGA</cdnaseq>

Protein Sequence

<aaseq>MALCFKAHTDPAIHQCREKTTGETSRPAVQASTIPMARERYETTEQGEKLFTGPELVLLGLPQATASLARSVSHSSHVNHQANRRCWLGPVFEHHKGTAPNRFLEEAASAEDQVHAHGGRPCHGAGQPVNPRHANGIAPIQLAIAKPESFLRSALGSWKMRRFSLHAVRYLVLWMLLRCGRELVAAVPPDGWYDYTAYTDCRGQPEPALYNGGILRFGNSDDPTGYRTTETGVFSPAFVVYNLNKTTMYTFSSWVKLEGASSALITARLALDNAGARCIGTVLARNDCWAFLKGGFVLDWPTQTSVIFFQNADKTPMKITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADQQGGRVVGASVSVRQTAKDFPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGGAVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHGAYSFSGFLGEYIVSVTYANSTSQATFSLSPGDETRHINIQI</aaseq>

Gene Sequence

<dnaseqindica>1..418#520..669#789..820#1656..1812#1923..2095#2227..2328#2408..2554#2629..3603#ATGGCCCTCTGCTTTAAGGCACACACCGACCCAGCAATTCATCAATGCCGGGAGAAAACAACAGGAGAAACTTCGAGGCCTGCAGTGCAAGCCAGTACAATTCCCATGGCACGAGAGCGGTACGAGACAACAGAACAGGGCGAGAAATTGTTCACAGGACCTGAGCTTGTTTTACTGGGGTTACCGCAAGCAACAGCCTCGCTCGCTCGCTCGGTTTCGCATAGCTCGCATGTGAACCACCAGGCGAACAGGAGGTGTTGGCTAGGCCCGGTGTTTGAGCACCACAAGGGCACTGCACCAAACCGCTTCCTTGAAGAGGCGGCCAGCGCCGAGGACCAGGTGCACGCGCATGGTGGGCGCCCATGCCATGGCGCAGGCCAGCCCGTGAACCCCCGCCACGCCAATGGCATCGCGCCAAGTGTGGAAACACCGGCCACCCGGGCCTCTTCTATATATACACACCTCTGCACACATCTCCTTGCATCGCTGTGATCACGACACAGAACGTACATCCTTCAGTTCAGCTCGCCATTGCTAAGCCTGAAAGCTTCCTTCGTAGCGCACTTGGGAGCTGGAAGATGAGGAGGTTTTCTCTACATGCCGTGAGATATCTCGTGCTGTGGATGCTGCTGCGGTGTGGCCGTGAGCTCGTTGCAGCGGTGCCTCCTGGTCAGTCTCGCAACCGTCAGTTCTCTATCTCTATCTCTTTCCTGTTATATCTCTCTCGTGCATAAGAGCTGGTAAGGTCGGAGCGTGTGACACTGTTTGAACTTTTGGGTTTCATGCAGATGGCTGGTACGATTACACTGCATACACCGACGTAAGTCTCAAAATGAACCATCCTTGAGCTTTTTTTTTTTCGCATCAGTGTGGTCGTTGAGACTTGAGATTGCTGACAAGTGATACATAGTTCGGGGGGTAAAGGCCAGTGTTTGTCCATAGTAATCCTTGCATTGTTTATCAATGGCATTCCTCTTCTGGGAACTAATGACACGGGGACTAGGAAGAACGGAGAAGATGACGAAGCTTGAAGTCACTGGACCACTCACTGCTTCCTCCCCACACTGAACATGACCCTTTTCTTCAGTTATTTCAGTTTGTTGTCATGCGTACGCTGGGAGACCACAAGCCCGCCCGTACCTACCTGATGCCAATTAAAATTCTCACACGGAACAAATGACAACTGTTGTGCTGCGCTTTTCAAAGTATTTTAGTATTAGCGTTCGCCGAGTTCTTGGTTATGTCCGAATGTATCATGCTCAGTTATCATTAGCTAGTTCATCATGTCAGTCCAATTAAGCTCCGCAAGGCGTCAAGCGCCAGAGCCAAATTACACAGGCCTAACATGCATTTTCAGGCCAACCAACTAACACGGCAAGTGAGATGCTTACTGATTATTAGTGTATGCTTAGCTGCACTTTCTTGTGTGCCTCGTGTCATTCTGTCGCTCTCGTTATGGGTTATGGGCGTTATGGTATGATTAATTAATTATCACCCGGAGGAACTTTGGGAGAAGTTTCAGTATGTGTGCAACTATGCTAACCAGCTCTGCAGTAAACTGGACCAAACTAGTTCTTCACTTCGTGCAATGCTTGCAGTAGAACGGGAAGTGCTAATGCATTGATTTTGTTTTGAAATGTACATGCGACTTTCAGTGCAGAGGGCAGCCGGAGCCGGCGCTGTACAACGGAGGGATTCTGAGGTTCGGCAACAGCGACGACCCGACCGGCTACCGCACGACGGAGACCGGCGTCTTCTCGCCGGCGTTCGTGGTCTACAACCTCAACAAGACCACCATGTACACCTTCTCAAGTGAGTTTCTCGCCGTACACCCTGTTCGATCATGTGGTCGTCAGATCACGTTACACGTACATTCCAGCTTCAGATCATCAAACCAACACTGCATTTTTCACGTCGTGTAGGCTGGGTCAAGCTGGAAGGCGCGTCCTCTGCTCTGATCACGGCGAGGCTTGCGCTGGACAACGCCGGCGCGCGGTGCATCGGCACGGTTCTCGCGAGGAACGACTGCTGGGCCTTCCTCAAGGGCGGCTTCGTCCTCGACTGGCCAACACAAACCTCAGTTATATTTTTTCAGGTAAGCATCTGTGATAATAATTCACCTGTAACCCAACCATATGCGACCACTCTATGGCATCCGATGATGTTATGTACTAATGTTTGTTTGCATGGTATTCTTATCATGTCCATTGTTGACTTGCTCCTCAGAATGCTGACAAGACCCCTATGAAGATCACGGTCGCGAGCGGTTCGCTTCAGCCGTTCACGTCGGATCAGTGGTCCATGCACCAGAAAGACACGATCCGGAAGGTAACGTTTTCGTTTAGACGTGAAAATATATAATGCGAGATTGCGACTCTGATAACCTGATCTGTTTTGGTTCAAGCAGAGGAGGAAGCGGATGGCTACCATCCACGTTGCCGATCAGCAAGGCGGCCGCGTGGTTGGCGCGTCCGTGTCCGTGAGACAAACCGCCAAGGACTTCCCGTTCGGCTCGGCCATCGCCTCCACCATCTTGGGGAACCAAGCCTATCAGGTACGTGCAGCGTCGCGTCAGTGCAAAGAAAGTGTAGAAAAACGTGGCTAAAATGGTGTATGGACTGGTGGCAGAAATGGTTCGTGGATCGGTTCAACGCGGCGGTGTTCGAGGACGAGCTGAAGTGGTACTCTACGGAGCCCATGTCGGGGCAGCTGCGGTTCGACGTGCCGGACCAGATGCTGGCGTTCGTGCGGTCGCACCGCGTGATGGTGCGAGGGCACAACATCTTCTGGGAGAACCAGGACGCGACGCCGAGCTGGGTGAAGGGCCTGTCACCGGACGACCTCCGCGCCGCCGTCAACGGCCGGATCCAGAACCTGATGACCCGCTACCGCGGCGAGTTCGCGCACTGGGACGTGAACAACGAGATGCTGCACTACAACTTCTACGAGCAGCGGCTGGGCGCCAACGCGTCGGTGGAGTTCTTCAGCGTGGCGCAGGACGCCGACCCGCTCGCCACGCTCTTCATGAACGAGTTCAACGTGATCGAGACCTGCGACGACGTGTCCTCCACCGTGGACACGTACGTGGCGAAGCTCAAGGACCTCCGCGCGGGGGGCGCCGTCCTGGAGGGCATCGGCCTGGAGGGACACTTCCTCAAGCCCAACATCCCGCTCATGCGCGCCGTGCTCGACAAGCTCGCCACGCTCGGCCTGCCCATCTGGTTCACCGAGATCGACATCAGCAACCGGTACGACGCGCAGACGCAGGCCGTCTACCTGGAGCAGGTGCTCAGGGAGGCGTACTCCCACCCGGCCGTCACCGGCGTCATGCTGTGGACGGCGCTGCACCCCAACGGATGCTACCAGATGTGCCTCACCGACTGGAACCTCAACAACCTCCCCGTCGGAGACGTCGTCGACCGCCTCCTGCAGGAGTGGCAGACGGGGCAGGCCGCCGGCCCGACCGACGCGCACGGCGCCTACAGCTTCAGCGGATTCCTCGGGGAGTACATCGTCTCCGTCACCTACGCCAACAGCACGTCGCAGGCCACCTTCTCGCTCTCTCCCGGCGACGAGACCAGGCACATCAACATCCAGATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012215