Os12g0433700

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0433700| Description = Lg106-like family protein| Version = NM_001190004.1 GI:297729138 GeneID:9272205| Length = 3026 bp| Definition = Ory...")
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Gene Name

Os12g0433700

Description

Lg106-like family protein

Version

NM_001190004.1 GI:297729138 GeneID:9272205

Length

3026 bp

Definition

Oryza sativa Japonica Group Os12g0433700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:14202377..14205402

Sequence Coding Region

14202593..14202640,14204131..14204187,14204454..14204501,14204611..14204667,14204810..14204863

Expression

GEO Profiles:Os12g0433700

Genome Context

<gbrowseImage1> name=NC_008405:14202377..14205402 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:14202377..14205402 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagactgcaacgacaagtcatcagcctcttccatggaaaaacagacctatgctcaaaacaagtatggaggaattacacccaagaagcctctgatttcaaaggaccctgagcgcgcctacttcgattccgcagactgggtcctaggcaagcaagctgcaaacggcagcgcaagggcagcaattgagtccttgaagccaaagctaaagagaacgccccatcaccagctcccccctcgcaacccgacctgtgcatccagctga</cdnaseq>

Protein Sequence

<aaseq>MADCNDKSSASSMEKQTYAQNKYGGITPKKPLISKDPERAYFDS ADWVLGKQAANGSARAAIESLKPKLKRTPHHQLPPRNPTCASS</aaseq>

Gene Sequence

<dnaseqindica>217..264#1755..1811#2078..2125#2235..2291#2434..2487#aattcagagctgtatatcttgtctcgtgtctcttgtccagttgtatctctcgcatacagcaccaaggttctccctcacctacctacccagatcgaatctttgggcacaattcgcatgaattcgcacatgtttttgtggtgctcatcttgttcttgagttcttgccaagttagttacagaattcgttgtttgttgtgtagcaggcagaggaggagagatggcagactgcaacgacaagtcatcagcctcttccatggaaaaacaggtacttttgcagctttcttattgtttctctgaattgttctagtcgcgattaagaatgctcctaattaagttgtaatctcttgtttgtggctgcccaatttcggcgattcagagttcgattaactatggattcagcacttttttcctgcttaggttttgatgttatcctgcctgagccttctgaattgcagttcttttgattttttttaacgatgtttgtcctggatcaatttatatttcaaatttgaattccaatataagaagggcatttttttttggtaactattcatactaggagctccagttcatttctctcccctatattgatgctccagtgatttagcagaaatggagttctttgttttaggcaaatggggtttatcggttatggcaattttcaatatatattatatttttgatgttgctctgcccctgctctgtttgatagaagataatgcaatgcagatctttacaaactgaatgtctgaatatctcaggcaccataatgttcctcagatccatgcttgattaattgggacatatgatttttttttttgctgcgaaattgggacatccgattattcctgccaccaaaaattttagcttttaacgatttaatgtgagaaaatagagtcaacttgccatcttgatgcctggttaatcgcaatggaatttccgatttgatgctccatgtttttcaaaactgcataaaagtacctcgcctaatgcggttcttccacttgtccctaacaactactacaaactgtcagtccatgtgacagtaggagagtgcctttgttgactgtacacaccaaccacaagaacaatacaaccgttgaactttccacggtctctaaagaatgtaacaaccaaaattcttctggggcctgaagaaaaaatggccaagattacccgcatatatatgcaccatgttcatgatagaatataatatatataacgcacaatcctttttaactcatcccttttcattactgagaaatagaattttggaatctttcaccatcttgctttgcatggattatgttgacccctcaatcatttgagtggatttttggctgaaaacaggttctggaaccctgtccttgtcaaggataggctttgttaagggatcaacatcagtgttgcatggttcacatgcttgtagtgctctcccaaaaagcacagtgtttttgcatcatgcaattatgaatgatgtatggttgcatggacttttagggaaaaaaggtttaggtttttaggagtagatttgatgagtgtgcttgtgttagttacattacttttgatgcattatcttcttctgatgattaattggctttgcacaaagttagaggatatatgcccatatttggtcatagtctgatgtttgtacctaacatatatcatatatgtaataataatattagaaactctcttttagacgaaaactagcaactctaaattcaataagacttatagctctttgggttgcagacctatgctcaaaacaagtatggaggaattacacccaagaagcctctgatttcaaaggtattggtcctaaattatcttgacttccagttcggtagaaaagcaaaatcttgacttctatttactaccatggttcactctcacaataatcaattcaccacaaccatgtttactggcatgtgttgaatgccacattagtaccattttgtgagacaatggttggaactttggcaataatcactcaaagactcatggaattccttttgaagagcactttgttaataatttctctgttcctcaattggattatttgattttggctgcaggaccctgagcgcgcctacttcgattccgcagactgggtcctaggcaaggtacacaaatccttgcaatccagagacaaataaacataccatgtacaacaaaaagctgttcttttttactgaagcttttgctttcttttctgatgatgctttgcttcagcaagctgcaaacggcagcgcaagggcagcaattgagtccttgaagccaaagctaaaggtgagtagtacacaagaggccaactagtgattctgatccaattgaattgactgccctgcacttcaagtatttgtgtcaattattcctagtgtttgcattgttgtgtaagcaaaattttatatgctcttgtctgtacttgcagagaacgccccatcaccagctcccccctcgcaacccgacctgtgcatccagctgatcagtgcagcaaaggtagtagtaaattagggtttaatatattggttaggatatttctatctgggtaccaatagttccgaaataatttgtaatttaaacaaaaaatggtcaaatttgaacaaagttttgctaaattcacgaaaatctgaaaaaaaaaaattgaaccctggtagtaatcacagatctgaaactgcagcttctgagttctgaactctctgctattgcctgattgtctgaacagccattgtcatctggatcatgcaggtgaagctggagtgctccctggctagcaagtcacaggggatcgaagatgggaatagcaatttaaaattagctggttaattaattacatacgttaggaaagaaaagccaggattgaactctgcaaattggattcttgattcttggaggagcctaagctaattgcttgctatgatcaagttagatgttgtttggttgcaagtattttcttgcagaaacactccgtgtattctccaatccatatttgaatgtcttatacatactttcgcaagaaattgg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0433700, RefSeq:Os12g0433700