BGIOSGA012274

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Revision as of 09:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012274| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012274, complete gene.| tag = OJ1041F...")
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Gene Name

BGIOSGA012274

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012274, complete gene.

LocusTag

OJ1041F02.14

Ensembl Transcript ID

BGIOSGA012274-TA

Ensembl Protein ID

BGIOSGA012274-PA

Length

3341

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9151997..9155337

Sequence Coding Region

9151997..9152299,9152420..9152781,9152870..9152913,9154717..9154931,9155049..9155173
,9155262..9155337

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9151997..9155337 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9151997..9155337 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCCCCGACAAGGTCGGCTGCTCACCGGAGCCTCTGCCCCTCGACCGCCTCCTGGCCGAGCTCGCCGCCAACGCCGAGCGGCTCGGGAGGAGGTGGGAGGCGGTGCTCCGCAAACGGGGAAGGGAGGGAGCCAGAGCGGCGGGCGTGGGGTTGGAGGAGGGTAGGAAGGCGGATTCGGCGGCGATGCAGCTGCACACGCCGCTGTTCTACGCCACCTGCGCCCTCGGCGGGCTCCTCAGCACCGGCCTCACCCACCTCGCCGTCACTCCCCTCGACCTCGTCAAGTGCAACATGCAGGTTGACCCTGGTAAGTACAGGGACATTTCATCTGGATTTGGTGTCCTGCTCCAAGAGCAAGGTCTTGGTGGATTCTTCAAGGGCTGGATGGCCACGCTGGTTGGGTACAGCAGCCAGGGGGCTTGCAAATTTGGGTTCTACGAGTTCTTTAAGAAGTGCTACTCGGACATTGCTGGCCCCGAGCATGCTGAGAAGTGGAAGACCTTCATCTACCTTGCAGCGTCGGCATCGGCTGAGATGATTGCAGATGTAGCTCTCTGCCCCATGGAGGCTGTGAAGGTTCGAGTCCAAACTCAGCCAGGATTTGCTCGGTGCCTGACGGATGGGTTTCCGAAGATTGTCCAATCTGAAGGTGCCTTTGGGCTTTATAAAGGACTACTTCCTCTCTGGGGTCGCCAAGTTCCTTATACTATGGTGAAATTTGCTTGCTTTGAGACAATTGTTGAATTAGTATATAAGCATGCAGTTCCAAAGCCAAAAGATGAATGCAGTAAGCCACTCCAGCTAGCAGTGAGCTTTGCAGGGGGATATATTGCAGGAGTCTTCTGTGCAGCTATCTCTCATCCTGCAGACAACCTGGTGTCTTTCCTCAACAATGCAAAGGGGGGCACTATGGCTGATGCTGTAAGAACTCTAGGAGTGTGGGGCCTTCTCACTCGTGGCCTTCCACTCCGTATTATTATGGTTGGTACTCTTACTGGAGCTCAATGGGCAACATATGATGCATTTAAAGTCTTTGTTGGACTGCCAACATCTGGTGGATTCATTCCTAGTCCTGCTGCCACCGATTTGCGCCAGGTGGATCATGAAAAGCGGAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MASPDKVGCSPEPLPLDRLLAELAANAERLGRRWEAVLRKRGREGARAAGVGLEEGRKADSAAMQLHTPLFYATCALGGLLSTGLTHLAVTPLDLVKCNMQVDPGKYRDISSGFGVLLQEQGLGGFFKGWMATLVGYSSQGACKFGFYEFFKKCYSDIAGPEHAEKWKTFIYLAASASAEMIADVALCPMEAVKVRVQTQPGFARCLTDGFPKIVQSEGAFGLYKGLLPLWGRQVPYTMVKFACFETIVELVYKHAVPKPKDECSKPLQLAVSFAGGYIAGVFCAAISHPADNLVSFLNNAKGGTMADAVRTLGVWGLLTRGLPLRIIMVGTLTGAQWATYDAFKVFVGLPTSGGFIPSPAATDLRQVDHEKRS</aaseq>

Gene Sequence

<dnaseqindica>1..303#424..785#874..917#2721..2935#3053..3177#3266..3341#ATGGCGAGCCCCGACAAGGTCGGCTGCTCACCGGAGCCTCTGCCCCTCGACCGCCTCCTGGCCGAGCTCGCCGCCAACGCCGAGCGGCTCGGGAGGAGGTGGGAGGCGGTGCTCCGCAAACGGGGAAGGGAGGGAGCCAGAGCGGCGGGCGTGGGGTTGGAGGAGGGTAGGAAGGCGGATTCGGCGGCGATGCAGCTGCACACGCCGCTGTTCTACGCCACCTGCGCCCTCGGCGGGCTCCTCAGCACCGGCCTCACCCACCTCGCCGTCACTCCCCTCGACCTCGTCAAGTGCAACATGCAGGTCTTTCGCCGTGTTACTGTAGCTCAAATCTCTAGCTTCCCCAATGACTAATGGAACTCATACAAATCACTAGCTCCCTAAATGGTTAATGGAATTCGTGTGTACAATGTATTCTTGCAGGTTGACCCTGGTAAGTACAGGGACATTTCATCTGGATTTGGTGTCCTGCTCCAAGAGCAAGGTCTTGGTGGATTCTTCAAGGGCTGGATGGCCACGCTGGTTGGGTACAGCAGCCAGGGGGCTTGCAAATTTGGGTTCTACGAGTTCTTTAAGAAGTGCTACTCGGACATTGCTGGCCCCGAGCATGCTGAGAAGTGGAAGACCTTCATCTACCTTGCAGCGTCGGCATCGGCTGAGATGATTGCAGATGTAGCTCTCTGCCCCATGGAGGCTGTGAAGGTTCGAGTCCAAACTCAGCCAGGATTTGCTCGGTGCCTGACGGATGGGTTTCCGAAGATTGTCCAATCTGAAGGTGCCTTTGGGTATAGATACTGCATTTCTTGTATACAATTGTGACTTCTGTTCAAAGTTTATTTGGGGACATCCTATAATACAATGTGCGAATTTCAGGCTTTATAAAGGACTACTTCCTCTCTGGGGTCGCCAAGTTCCTTGTAAGTCAAATGTCTCGTTAGCAGTTATCTTTCACTAGAGTATTATATTTGCATGTCAGGTTTTTAACTGCATAATGTAGACCATAGGTCCATAGTAATGGGGCAAATAAAAGGTCCATAGTAGCAACTAACATTTGACAGCAAGGGCTATAGCAAAATCCTCTGGTGAGTTACTGTTTTTGCTCATGTTCCTACTGAAAGGATATTAGATTTTGTGTGCAATAACATTATGTGCCATGAGCGTTGACCATGAAGAGAAGTCTTGAAGTCGCATGCTCACAAAGAGCCATCGTTGACAGATTGATACTATTCTAACATACCAAATTGCCCATTCTACTGAATGAGTGCCACTCATCGTTGCTATTTTCTGACAGAAGAATAACTTTAGCTGGCACTATTTTATAACTCTTTTTTGAGAGTTAGTATTTTAGTAGTCTGCTCTCCTAATAATGCTGCAAGACATAGTCTGTTGCACTTTCTCGAACAAACAATATTATATTTTCTTACTTATGTGGCTACTCTATGGAAAAATTGTCAATTGTAACTATTATCACGGTAACAACTTCAGGGCATCCCTCGAAATTTACACTACGAATTTAATTCATTGCACCCTAAGTAGAAGTCAAGATCAGCTGTAGTTGTCAAAACTGAAAACAATCAAATGGTTGCTGTAGCTTTAAGCTATGTATACTAGATACCTCATTTGTTTTGCTCAGCTTCTTAGTTTGCTATTCTTGGAAAAAAATGGATGGAAAATTTAACATCAATTTGTCAGGATGATAAAAGGTGGGAGAGGAGATAATCTTCCAACACGTTTATGGGGAATTGGTTTGTTGATATCGAAATATGCCCACTTTAGAAATATACCACTCAAAGTTACCGATGCACTTCAATACCACCCAAAGTTTCAAAAGCATAGATAATTAGATATCTGCCATACCATTTTTTTAAAAAAAACAAATCAAGGCAATGCACTTACTAACTTTTAGTGGTTGTTTTAATGAGGAAAATAAAAGCAGGTTTTTAGGGGGGAAACGACTTTTAATTCGAGTTTTCCCCAAAGAAACTGAACATATGTTGTTATTCCGTTATTCCAGAATCTAGATATATGTAAAATCTTGTTTGGCTGGGCACCAAAAACATTGTGGAGTCGTTCCTGAGAAAATACGATTTTTCCAGTTTTGAGGAAACTTGGTTTTATCCAGGATCTGGTACATGAAACAAACAAGGATTTACCTAAAACAAGATTAAGGTAAACTAGAATTAATAAAATGTAGTGTAAATTGCAGATAGAACCACATCTTTTAAAAGGCAACATATCCTATGCACACAGGCCCTCACGTGTACACACGTGCACACCAACTAAAAAATGTCACCAAAAAATCTAGAAAAAATCATACACATATTTTCAATTGTATTACACCTAGGGTTAAAATCTTAACGTCAAATTCATTATATTTTAGCCGTAACAAAAAAAAACAAAAATTCTGACAGTTTTAAGGTTGCAATTTTGTCAGAATTTTATCTTTTTTGTTATTCTCTATGTAGAATGAATTTGAAGATGCGACTTTGCACGTAGATGTAATACTATTGAAAGTACATGTATGAATTTTCCTAGAATTTTTTGTGATAATTTTTAGTTGGTGTACACGGTGTGTACACGCGAAGGCCTGTGTGCATAGGATACGCTCCCCTTTTAAAATGTAAGATGCTACTAAGTCCCGTACAGATGCCAGCAATTCTTATGCCGTTTCCTTTTAGGTTGTTATTCTCACTTGTGTCTAAACTACTTTCAATTTCCAGATACTATGGTGAAATTTGCTTGCTTTGAGACAATTGTTGAATTAGTATATAAGCATGCAGTTCCAAAGCCAAAAGATGAATGCAGTAAGCCACTCCAGCTAGCAGTGAGCTTTGCAGGGGGATATATTGCAGGAGTCTTCTGTGCAGCTATCTCTCATCCTGCAGACAACCTGGTGTCTTTCCTCAACAATGCAAAGGGGGGCACTATGGCTGATGTAAGCTGCTAGCCCTCTCAGTGACTTTCATATAAAAAAAAAGTTCTTACACCTACTGTCAAGTAATGTTCTACTGATTTTGTTTAACTATTTCTGACTAATGCATTGCACTTTCAGGCTGTAAGAACTCTAGGAGTGTGGGGCCTTCTCACTCGTGGCCTTCCACTCCGTATTATTATGGTTGGTACTCTTACTGGAGCTCAATGGGCAACATATGATGCATTTAAAGTCTTTGTTGGACTGTAAGTACATCATGGACAGTTCGATTTTTGTATTGTGATGCCTACCAGTTATTTATGAATCATAAGCGTTTGTGAATTCAATCTCCAGGCCAACATCTGGTGGATTCATTCCTAGTCCTGCTGCCACCGATTTGCGCCAGGTGGATCATGAAAAGCGGAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012274