Os09g0381900

From RiceWiki
Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0381900| Description = The start codon is not identified.| Version = NM_001188884.1 GI:297726898 GeneID:9267887| Length = 1878 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0381900

Description

The start codon is not identified.

Version

NM_001188884.1 GI:297726898 GeneID:9267887

Length

1878 bp

Definition

Oryza sativa Japonica Group Os09g0381900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13537052..13538929

Sequence Coding Region

13537152..13538149,13538577..13538640,13538811..13538927

Expression

GEO Profiles:Os09g0381900

Genome Context

<gbrowseImage1> name=NC_008402:13537052..13538929 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13537052..13538929 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaaggggtgatagaaccgaaatcccagcgacggcggtggcggtggggaatccagtccctaccggctaccgatccgccgcgtccgatcggcctctccatactgggatcgcaaatattgggcatggatcaagattgcgatggcgcaaaccatggcggcacagaagaggaaagggcactgaatggtatggcagataaacttgagaatgctgatgacatggttgaacaagaggaaagctcaggcagcgcgccaagcccattattcttaggcacaaggccgaaaaggctgcgatcaaaggtgtgggatgacttcacacccatctacatcgacgggaagcttgcgagggctgagtgcatgcactgccaccaagttttcaacagcaacagcaccaatggcactagtaggctgctaaagcaccaggccaagtgcagcccccatccccagaaaaggccaatgcaacagaagcttccgtttccgccatccagccagaagagtctcatggaacccagttctgatccgacacagaagaagctcccattcttgccgatcagccaaaagagatgctcaggtacagacgatgcgatgcctcacaggaaggatcctgccttgcctaacaccctgaatgacataaaccggaggagtcaagagattggcaagagtttagctcgtaagaaactcgcaacacgtgagcagaagaatcctacctcgcctgacatcactaataatgatcagaaggatcaatgggatgatgaacacccagtgcttaaacagaagtgcactcctgctggcacgaatctgaagaatcctgaggttgatcagaatggactcatccagacattggcaatgtgcgggtaccttccattgatgatgcacaatgatagttttaggaagtgtgttccttgcttcgattctatggggaagatgccagcgaacactaacattggtggtggctttctgcaactgtttgacaaagaaaaggctaaggtgaaggagaagttttctgctttgagcagtcgggtttgcttgagtgctcatgtgtggcactatgatccattcttggcctttttgtgcctaagtgttcattacattgatgatgaatgggagagacagcagaagattatcacatttcgtgaaactaggaaggtagcccgcgttaatacgcgggcatgcgtcgtacactaa</cdnaseq>

Protein Sequence

<aaseq>EGVIEPKSQRRRWRWGIQSLPATDPPRPIGLSILGSQILGMDQD CDGANHGGTEEERALNGMADKLENADDMVEQEESSGSAPSPLFLGTRPKRLRSKVWDD FTPIYIDGKLARAECMHCHQVFNSNSTNGTSRLLKHQAKCSPHPQKRPMQQKLPFPPS SQKSLMEPSSDPTQKKLPFLPISQKRCSGTDDAMPHRKDPALPNTLNDINRRSQEIGK SLARKKLATREQKNPTSPDITNNDQKDQWDDEHPVLKQKCTPAGTNLKNPEVDQNGLI QTLAMCGYLPLMMHNDSFRKCVPCFDSMGKMPANTNIGGGFLQLFDKEKAKVKEKFSA LSSRVCLSAHVWHYDPFLAFLCLSVHYIDDEWERQQKIITFRETRKVARVNTRACVVH </aaseq>

Gene Sequence

<dnaseqindica>781..1778#290..353#3..119#gagaaggggtgatagaaccgaaatcccagcgacggcggtggcggtggggaatccagtccctaccggctaccgatccgccgcgtccgatcggcctctccatactgggatcgcaaatattggtatgcgtcttctcgaatccttgttctttcttcatttttgggtgttgtggtgatgtgtcggtgattcctttgtggtggatttgggttcttgtcgattcgtctgtattgcgcgtgcgaggatgtgattggaaaattctgcgatgaatggattgcttctgtttgttttccagggcatggatcaagattgcgatggcgcaaaccatggcggcacagaagaggaaagggcactgaatggtactgcacccctctctcactcacaggataacatctttaggtgatttgaatccatcgcagccctgcgtagtttgtcactattagtttctgttgcgctctattattaactattcctctagctgttaattgtctagtttgttactttgttcataaatctgacactcgacgagttctacattgctgaaatgtgtagtcattttgaaaaattaacaatgataacaacaaacgatattgcaattagtcttacggtgcgttaggctttgatcagtatataggattctgttcaaatctgatatgcactaaatctgctcaatcaattcttttttgtcacaaagtttgttcaaataaattaggacattgttcactcaaaggcataatttacttgattgcatctttacgcaattattcgtcctttcctcatgcttaggtatggcagataaacttgagaatgctgatgacatggttgaacaagaggaaagctcaggcagcgcgccaagcccattattcttaggcacaaggccgaaaaggctgcgatcaaaggtgtgggatgacttcacacccatctacatcgacgggaagcttgcgagggctgagtgcatgcactgccaccaagttttcaacagcaacagcaccaatggcactagtaggctgctaaagcaccaggccaagtgcagcccccatccccagaaaaggccaatgcaacagaagcttccgtttccgccatccagccagaagagtctcatggaacccagttctgatccgacacagaagaagctcccattcttgccgatcagccaaaagagatgctcaggtacagacgatgcgatgcctcacaggaaggatcctgccttgcctaacaccctgaatgacataaaccggaggagtcaagagattggcaagagtttagctcgtaagaaactcgcaacacgtgagcagaagaatcctacctcgcctgacatcactaataatgatcagaaggatcaatgggatgatgaacacccagtgcttaaacagaagtgcactcctgctggcacgaatctgaagaatcctgaggttgatcagaatggactcatccagacattggcaatgtgcgggtaccttccattgatgatgcacaatgatagttttaggaagtgtgttccttgcttcgattctatggggaagatgccagcgaacactaacattggtggtggctttctgcaactgtttgacaaagaaaaggctaaggtgaaggagaagttttctgctttgagcagtcgggtttgcttgagtgctcatgtgtggcactatgatccattcttggcctttttgtgcctaagtgttcattacattgatgatgaatgggagagacagcagaagattatcacatttcgtgaaactaggaaggtagcccgcgttaatacgcgggcatgcgtcgtacactaagtttgagacacttgtaagagcgaaatattaaccgaagaacatctatcacgatttctccgttaattgttttagtcggcattaattgcttttataatttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0381900, RefSeq:Os09g0381900