Os12g0434400

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0434400| Description = Similar to Cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline aminop...")
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Gene Name

Os12g0434400

Description

Similar to Cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase)

Version

NM_001073216.1 GI:115488393 GeneID:4352123

Length

4967 bp

Definition

Oryza sativa Japonica Group Os12g0434400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:14257350..14262316

Sequence Coding Region

14257350..14257376,14257883..14258333,14258813..14259007,14259113..14259375,14259711..14259851
,14259935..14260030,14260419..14260496,14260881..14260941,14261071..14261258
,14262188..14262316

Expression

GEO Profiles:Os12g0434400

Genome Context

<gbrowseImage1> name=NC_008405:14257350..14262316 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:14257350..14262316 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaacgtcgtcgatcctcctcagatcagttttgccgccaaggacatggacctcaccgagtgggagggagacatcctagccgtccttgtgaccgagaccgacgtgtccaaggcgacatcatcaagctccaggttcacgaacgccgccgcagcgctggcgaagctcgacggcgagctcggcggcctcctgtcggaggcgtcggcggaggaggagttcgccgggagagccgggcagtcggtggctctccggctccccacggcgccggggctccacggtttcaagagggtgtgcctcgtcggcgttggcaacaacatgccgtcctcagctgcggcttgccggagcaccggcgagaccatcgcggcggtcgccaagtccgcgcaggctcgcagcgccgccgttgctctcgcctcgccgccgccgggttgggttcagggagaggatcttaggctgaatgctgctgcggcagtggcttctggagttgtgcttgggttgcacgaggacaggagatacaagtctgactccaagaaggtgcatctcaagcaagtagatcttatcggatttggctccggccaagagatgggcaggaaacttcagtacgccaaccatgtttcctcagccgtgatcttcgccaaagagcttgtgaactcacctgcaaatgtccttacccctgctgttctcgcggaggaggcatcgaacattgcttctagttacagtgacgtgttgacggcgacgatattagacgaggagaaatgcagggagctgaagatgggttcgtacttggcagttgctgcagcctctgcaaatcctccacactttatacacttgtgctacaaaccccctggaggaaatgtcaagagaaagctagcaattgttgggaagggcctcacattcgacaggttctacctctctctagataatttgttgattgttacaaaatttgtgtgcattgggggctacaacattaagattggagcagtcaccactattgagctgatgaagaaagatatgggtggctctgcagcattgtttggtgcagcaaaagctttgggccaaatcaagcctcctggagtagaggttcattttatttctgctgcatgcgaaaatatgataagtggcacaggcatgaggcctggtgacattgtgactgcttctaatggaaaaactattgaggtggacaacactgatgcagaaggaaggcttacacttgctgatgctttggtatatgcctgtaaactgggtgttgacaagattattgatctggcaacacttactggttactgcagaattgcacttggtcctagcattgctgggattttgactccaagtgatgaactggacaaggaagtcgctgccgcatatgaggcatcaggagagaagttctggagactgccactagaagaaagctattgggagcaaatgaagtctagcgttgctgatatgcttaacaccggtagtccgctgggtggtgcaattacggctggactatttctgaagcagtttgttgatgagaaagtgaagtggatgcacgttgacatggctgggccggtttggaactacaaaaagcaagaagccaccggattcggcgtgtccacattggtggagtgggtcctcatcaactcgtcttag</cdnaseq>

Protein Sequence

<aaseq>MPNVVDPPQISFAAKDMDLTEWEGDILAVLVTETDVSKATSSSS RFTNAAAALAKLDGELGGLLSEASAEEEFAGRAGQSVALRLPTAPGLHGFKRVCLVGV GNNMPSSAAACRSTGETIAAVAKSAQARSAAVALASPPPGWVQGEDLRLNAAAAVASG VVLGLHEDRRYKSDSKKVHLKQVDLIGFGSGQEMGRKLQYANHVSSAVIFAKELVNSP ANVLTPAVLAEEASNIASSYSDVLTATILDEEKCRELKMGSYLAVAAASANPPHFIHL CYKPPGGNVKRKLAIVGKGLTFDRFYLSLDNLLIVTKFVCIGGYNIKIGAVTTIELMK KDMGGSAALFGAAKALGQIKPPGVEVHFISAACENMISGTGMRPGDIVTASNGKTIEV DNTDAEGRLTLADALVYACKLGVDKIIDLATLTGYCRIALGPSIAGILTPSDELDKEV AAAYEASGEKFWRLPLEESYWEQMKSSVADMLNTGSPLGGAITAGLFLKQFVDEKVKW MHVDMAGPVWNYKKQEATGFGVSTLVEWVLINSS</aaseq>

Gene Sequence

<dnaseqindica>1..27#534..984#1464..1658#1764..2026#2362..2502#2586..2681#3070..3147#3532..3592#3722..3909#4839..4967#atgcccaacgtcgtcgatcctcctcaggtgcgtcatgcgtgacttatgctaattatctcccggaaaaacaagttgctactttctttgacttgatcactctttgacatagtactctcgctcttgactgagaatatatacttatcgttttggagatgggtattatcaaacttttaaaattttaactattaataacaaataaaatatttgtcttataaatatgtagaatatgcatagattacttttagaaggtaggtaaataaaattacatatttattgatatttatatatatattgtaataaaaatagtggttaaagttattatttgaaaactatgtgtttgtcaaaaacgataattataatcaacctggagggagtgcagtgtttctgaaacaatcactgatcgagatgagatcattttagtgttcttcgcaaaagttttcttccatttatttctgttcgacaaattcttcgtacaaattttgcgtcatctttcaaacaaaatgaggtcaaattttcttggttaaattttatagatcagttttgccgccaaggacatggacctcaccgagtgggagggagacatcctagccgtccttgtgaccgagaccgacgtgtccaaggcgacatcatcaagctccaggttcacgaacgccgccgcagcgctggcgaagctcgacggcgagctcggcggcctcctgtcggaggcgtcggcggaggaggagttcgccgggagagccgggcagtcggtggctctccggctccccacggcgccggggctccacggtttcaagagggtgtgcctcgtcggcgttggcaacaacatgccgtcctcagctgcggcttgccggagcaccggcgagaccatcgcggcggtcgccaagtccgcgcaggctcgcagcgccgccgttgctctcgcctcgccgccgccgggttgggttcagggagaggatcttaggctgaatgctgctgcggcagtggcttctggtactgtgctgtgctccggttgctttcacttgtttttctttttccgttatctttttaggacccattcgcaataagcgttgaaattaactacttcccccatttaattttgaaaatacatgtagtttaacgacatgttaattgtatattatgaaaatatttctcataacgggtctaaaaatatgaatattatgatattaaactatatgagtttataaaagctaatcataaaaaaaaataaaatgttttaaaacaagataagttataacattattatgacagtatttttcaaggtaaatctgttcatatatatagtttccacataaccaatccatgtatattatattaagtagacgccacttttcagaattctagaaattttacctgaaacatattcaaaacgacatgtttttctttgttagatacttagatgtagacgtagtactattacctgctggattgacttcctcttcggattgcaggagttgtgcttgggttgcacgaggacaggagatacaagtctgactccaagaaggtgcatctcaagcaagtagatcttatcggatttggctccggccaagagatgggcaggaaacttcagtacgccaaccatgtttcctcagccgtgatcttcgccaaagagcttgtgaactcacctgcaaatgtccttacccctggtaaatcactgcattcttcctactgaaacactgtctgaattttctgcatagattccattgcaatgtctgcttatctgaatattaactctttgattctttcttcagctgttctcgcggaggaggcatcgaacattgcttctagttacagtgacgtgttgacggcgacgatattagacgaggagaaatgcagggagctgaagatgggttcgtacttggcagttgctgcagcctctgcaaatcctccacactttatacacttgtgctacaaaccccctggaggaaatgtcaagagaaagctagcaattgttgggaagggcctcacattcgacaggttctacctctctctagataatttgttgattgttacagtgaaatactcccttcatattttaatagatgacgttgttaactttttgcaggatgtttgaccattcatcatatttaaaaagttaataaaatattatttattttgttgtaccatgttttactattaaatgaactttaagtatgacttacattttgatatatttacccacgaatggtcaaatgtgacaccaaaagtcaatgacgttatctattaaaaaaatatatagtattaattagttcttacatgtgatttagaaactttcaatatgcttgtcataatggtagttttttctactacatcggtaataaataaagttagtttttacaattgattcagaaatttgtgtgcattgggggctacaacattaagattggagcagtcaccactattgagctgatgaagaaagatatgggtggctctgcagcattgtttggtgcagcaaaagctttgggccaaatcaagcctcctggagtagaggtacttcccttttcagttacttgtgtgagcaagcactggtttacttgttatggtgtatctactaataatttccctgatcacaggttcattttatttctgctgcatgcgaaaatatgataagtggcacaggcatgaggcctggtgacattgtgactgcttctaatggaaaaactattgaggtattattcttataatactttgagaagacaacaatattcagcatacacgaggcatagttatttagtaacgacgtgataccttttcttgtaatacttttgaaaatcaaaatattcaattatacatgatccatatcttaaatcagtacttcctccgtttcacaatataagtcattctagcatttttcacattcacattgatgctaatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggaaaatactagaatgacttacattgtgaaacggagggagtaatattgtgatgcttatcctgcttctcaattatcagtaatgctaagatcacactgttcttatcgtccagttcttgtctatcactttgttcaggtggacaacactgatgcagaaggaaggcttacacttgctgatgctttggtatatgcctgtaaactgggtgttgacaaggtaatgagttaattttgaaagttgctcgtgttctattgatatgactgccatctgtgaagttccatatttgaaaatttgtataggacattgctattgttggttgtaaactttttagccctgccaccattaactctttagaaacaagtcatttataaagccctgtttggactggaaaaatattttgcgctgcaaggaagcacaagaaccaaaatatagggattatcacacaataatttaaacagctcattgttcttgtcgatccaccaaaatataggaaaattgtctctctttttttcggttatgcaaagtatggttttcacttcttggtccatcttatagagagtgttgctcacgctacttacctatctttaattatgcaagcagattattgatctggcaacacttactggttactgcagaattgcacttggtcctagcattgctggtaagatcaaatataatatctcttctgtaatcttctccgttaataagtatggtaaattttgagtgcttacaagaaggaatagtgggtagtacattgttcttcagcatactaagagaaatatttttacagggattttgactccaagtgatgaactggacaaggaagtcgctgccgcatatgaggcatcaggagagaagttctggagactgccactagaagaaagctattgggagcaaatgaagtctagcgttgctgatatgcttaacaccggtagtccgctgggtggtgcaattacggctggactatttctgaagcaggtatattattttctctttcttatgaaccgagaaagaaattatctgtgcatcctttcgtggagtatcgtaaaaaatgtaaaccatatgatataaatggagcgtctaggcagtttgtattttataggatacattacccgtgggccaagatgaaatttgtctgagcagccatcattttgtctaggcaaaattctgctagaaaattaggttttcgtacggaaaaagttgcatttaaaagcgttgaaggatggtatagaacacggaaaattgctttcaaacttaaaccaaaccaaaatttctcaacaaagacagaatgaattgaaattacgtcgaaactgaaatgaagtgatgaatgtagccacattctgctagaaaaagaaaaacaatgttgggtttacaaaagtaaatctagttgacaaattcgtcgtcatcagtaagtaaaaacaatggactactttaatagttctgttcgtctcaaacagtatatttacatacctgcactgatcgtcagcaacatcatgcatcttaaaacaataaaatgggtagacaaactactgcaatcatccaaatgataaaaaatatcaacataattatggtgaattaatggaaaacgaggctctttatacattcccaggtcttaatgctgccattacatggctatatatgaaaaagtatttactagaaacaaaatagtactcttgaactgtcaaatttgttaagggtaaatgtgagatagtttatgttaaatgtatcagagcaatttctcatcacttatgtacacaatatatatgtcatttagagccaaagtaattgatcgagatcaagccccaattccttgtctctaaaattgacaaaatcattagctccagttcaatgtttttgacataattttcagggtatatatataaatgctgatgcttttttctttgcagtttgttgatgagaaagtgaagtggatgcacgttgacatggctgggccggtttggaactacaaaaagcaagaagccaccggattcggcgtgtccacattggtggagtgggtcctcatcaactcgtcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0434400, RefSeq:Os12g0434400