BGIOSGA012281

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Revision as of 09:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012281| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012281, complete gene.| tag = OJ1012B...")
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Gene Name

BGIOSGA012281

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012281, complete gene.

LocusTag

OJ1012B02.10

Ensembl Transcript ID

BGIOSGA012281-TA

Ensembl Protein ID

BGIOSGA012281-PA

Length

3267

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9253831..9257097

Sequence Coding Region

9253831..9253946,9254084..9254150,9254244..9254314,9254683..9254800,9254874..9254947
,9255331..9255386,9255501..9255584,9255664..9255751,9255839..9255916
,9256388..9256444,9256659..9257097

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9253831..9257097 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9253831..9257097 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCAGCAGGCGGCGGAGGCGCAGCCGCTACTGCTGCAGGGGGACCAGGTGGACGCCGAGTGGGGCTGCAGGCCGCACCGCATTGTACTTTTCGTCGAGCCGTCGCCCTTCGCTTACATCTCTGGGTACAAGAATCGCTTCCAGAACTTCATCAAGCATCTGCGAGAGATGGGCGATGAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MGQQAAEAQPLLLQGDQVDAEWGCRPHRIVLFVEPSPFAYISGYKNRFQNFIKHLREMGDEVLVVTTHKGAPEEFHGAKVIGSWSFPCPLYQNVPLSLALSPRIFSAVAKFKPDIIHATSPGVMVFGARFIAKMLSVPMVMSYHTHLPAYIPRYNLNWLLGPTWSLIRCLHRSADLTLVPSVAIAEDFETAKVVSANRVRLWNKGVDSESFHPKFRKHEMRIKLSGGEPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGDGPYRAELERMFTGMPAVFTGMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGKTSFLFTPGDLDECVRKIEQLLSSKVLRESIGRAAREEMEKCDWRAASKTIRNEHYCTATLYWRKKMGRTN</aaseq>

Gene Sequence

<dnaseqindica>1..116#254..320#414..484#853..970#1044..1117#1501..1556#1671..1754#1834..1921#2009..2086#2558..2614#2829..3267#ATGGGGCAGCAGGCGGCGGAGGCGCAGCCGCTACTGCTGCAGGGGGACCAGGTGGACGCCGAGTGGGGCTGCAGGCCGCACCGCATTGTACTTTTCGTCGAGCCGTCGCCCTTCGCGTCAGTGCTCTCTCTCCTCGTAGTCCTACTAGTCAGATCATCGTACTAGCTTAGATCAGATCGAGATGTCAAACCTGCCGCTCTTTCGATCTATTGAACTGCAAAGTCAATAGTTTTTGCTCGTTGCTGTTTCGCAGTTACATCTCTGGGTACAAGAATCGCTTCCAGAACTTCATCAAGCATCTGCGAGAGATGGGCGATGAGGTATATGATCTTTTTACTTCATCTGGCTGCTGGCTGCTTGTGTGTGTAGGGCGTGTATATACCTTGGAATTGACGTGTGCTCTTTCGAAACAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGGTAATCCAATACAAACTAGAAACTACTTTTACCTTCCATTTAGCATTCGGTCTACCTGAGGAGCACCAAACACAGAATACAAGAATTACTTTCCTGAAAGCACAAAACTTGCTCTCACTGCGAAATAGGGCCTTACTCGCATGCTGAAGCAAAAGGAAACAATGCAAGCGAAGTGTCATCTAGTCAACTAGCATGCTGATTTGGAACATGTGCTTGTTGTGAGGTGAAATTGGTGATGTTGCACTTGTTTTCCAATATTTTGTCTGGTCAAGTCGTCAAGTATATATATTTTAGAGGACACTAGAATTCTTCTTGTTGAAATTTCTTCTATCTGCATGCACTTAATTGCCTAAATTTCTATTTCTCAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTAATCATTAAAAACCCAATAGGTATCATTGTCCTTTCTTTTTGTAGTTTCTCACTATATATTGTGATTTCAGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTGAGTTTCTCTTCTTAAAATCATGAATACTTCTGCGATATGAGTCCTGCATGCATAATATTGTTACGAGCAGATCTTACAGCCTCTAAATTAGGGACCAGATATAGTACTGTAGGGCAAGACCATCATAGTCCAGTGATTTCCCTGGCAGAGATATTTACTTTCGAAATTTTGGGGAAAAAAACACATTACTATGTCATGCTATTGGAGGATTAAAAAAAAACTTGGATGCATATGCATGGAATCAACAGGCAAAAGTGTTGCCTCCCCAATGTTGATTAAAGCATCCAACCGAGGCACATCATTACAACACTAATTCTTTCTGTTGCAAATTATAATACCTGGTGTTGATTCTTGAGCTGAATTCTTGTCATGACTTTCAGGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGTAAGCATAACATCACCTCTTAGTTTGTTCTTCATAAAAGAAATAATCTGACAGCAAAAATACAACTGTTCTTTCTCATTAAATTTGTACTGACACTCTTATTTTGTTTTGAAGGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGGTTAAACAATTAAGATAAATCTATATTTCTTCATTTCATTCCTTCATCCATCATAACCGTAGTTTCCTTGTCTCTTCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGGTTTGACCTATTTCTTTAATATTCAATAGCAGTATGTGAAAAAAAATTGTGCATAGCTAACTTATTTTCCTTTTTCTCTCTTGTTAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGTAATCTTTTTGGCTTGTACATATCACTGTTTGTCAGTGTAAAATCAACTCCAAACAAAATTTGAAGAATATAGATGGGGGAAAAATGGAAAGAGAAAGCTCCTCAACTAACAATGGATTATTTCATAGTACATCCGTCCCAAAATATAACAACCTAGAACCGAATGTGATATTTCCTAGTACTATGAATCTGGACAACTACAGTGAAAACATCTGTGGCATGTTGTTTTCTCTGGCATGGCCATTTTCGTTAGTTGTCCCTGAGTTAGCATAACTTGCAATCGTCTTAGCCTTTTAGCTTGAATCATGCTTGTAATATGACTTACATGGTCCTGTTTATGACTTTAACCAAGCAGCCATTTCAAATTCGTCACATGTATCATAGATCACTTATCTGTATGTCACATGTTCACTACATGGTTGTTATTTTGTCATGTCATCAGAACTTTGCTTATTTTGGTGACAATACAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGTGCATTCCTTAATGTTAAATATTTTTCGTTATCAACAAGACTCATACATGATAACATATATATTGAAATGACACTATTTGGAGCACTTCAGTTTTATCTTTTGCGTATGACTGGTATTATATGCACAACTGTAGGTGCCTAGCCATCTGTTTGATCCCTATAGTTTCATCTTGAATTTGGAGAAACTTATGCGGCCTGTTTAATCTTTGGCAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012281

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012281&oldid=57104"