BGIOSGA012312

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Revision as of 09:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012312| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012312, complete gene.| tag = OJ1261C...")
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Gene Name

BGIOSGA012312

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012312, complete gene.

LocusTag

OJ1261C08.7

Ensembl Transcript ID

BGIOSGA012312-TA

Ensembl Protein ID

BGIOSGA012312-PA

Length

2734

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9716363..9719096

Sequence Coding Region

9716363..9716581,9716711..9717250,9717671..9717901,9717988..9718128,9718503..9718700
,9718803..9719096

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9716363..9719096 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9716363..9719096 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCTGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCCACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MACLAPQLKWPLSTRAAAFREHGGAGIGGFRTVRLHCAVSTTALVEAESSDSLAPGARRLVVYDGAVAPPPLPGGFGEAILNQEAVVAAAAAEAVALARAAAEVAGEVVRMSQTEQRHRPDFVTTHDTEDNYLAREILRAEAGLGARYADACLSEDAGFSSIFSDESEVDDDEQCVQGVAVKSVRQSERRARRVRAAMKAAKSFSGRNPVAASSSARKKRLKGCRSPLGCFYKMTGWRLLTAKQEVEFSQGIQDLLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLRKRLNYGISCKNTMVKSNVRLVISIAREFEGPGMEFSDLIQEGIQGLVRGAEKFDASKGFRFSTYSHWWIKQAIRKSVLEQTQIIRLPAHMAEASSRVKECRRRLRRQLKRLPTNEEIASDTGMPLRRVEAAMSLPKYTVSLTSKVGCTDMTYQEITPDTSTETAEEMLHRWLMKEDVDRALDGLSPRERQVIRYRFGMDDGRLRTLHDIGRLMGVSRERIRQIELVAFRKLRGRKKVQSLQHYLQPVESW</aaseq>

Gene Sequence

<dnaseqindica>1..219#349..888#1309..1539#1626..1766#2141..2338#2441..2734#ATGGCGTGCCTCGCGCCGCAGCTCAAGTGGCCCCTTTCCACCCGCGCGGCGGCGTTCCGGGAGCACGGCGGCGCCGGAATCGGCGGGTTCCGTACCGTTAGGCTCCACTGCGCGGTGTCCACCACCGCGCTGGTAGAGGCCGAGAGCTCGGATTCCTTGGCCCCCGGGGCGAGGCGTCTCGTCGTCTACGACGGAGCCGTCGCGCCGCCGCCTCTTCCGGTAACGTCCTTTCGCTGTGTTCCGGGCTAATGCTGGCCACGACCATGCCCTGTTTCCTCAAACGAATCCTGCGGGCGGCTCACTGGGATTCATGGCCCTCAATCTTACTTTGGACTGCGTAATTACCAGGGAGGTTTCGGTGAGGCGATTCTCAACCAAGAAGCCGTGGTGGCGGCCGCAGCGGCGGAGGCCGTCGCTCTAGCAAGGGCAGCGGCGGAGGTCGCCGGAGAGGTCGTCCGGATGTCGCAAACCGAGCAACGGCACCGGCCTGACTTCGTCACGACGCACGACACGGAGGACAACTACTTGGCCAGAGAGATCCTCCGCGCCGAGGCGGGATTGGGGGCGAGGTACGCCGATGCCTGTCTGTCGGAGGATGCGGGGTTCTCCAGTATCTTCAGCGATGAATCCGAGGTAGATGACGATGAGCAGTGCGTCCAGGGCGTGGCTGTGAAATCGGTGCGCCAGTCCGAGAGGAGAGCTCGGAGGGTGAGGGCGGCGATGAAGGCGGCCAAATCGTTCAGCGGCCGGAATCCCGTCGCGGCGTCGTCGTCGGCGAGGAAGAAGAGGTTGAAGGGTTGCCGGAGTCCTCTCGGCTGCTTCTACAAGATGACCGGCTGGAGGCTTCTGACAGCAAAACAAGAAGTTGAGTTCTCACAAGGCATTCAGGTGAGGCTAACAAATTGAATGCATTTTGTGAGATTGCATTTTTTGGTTTTGTGGTGTTATGCTTGCAAAATTTAGGATGCATGTTTTGGTACAAATGTTGCAGCAGCATATGTTTATTGCAGCAAATTCCACAGCATCTAAAATCCCATCCTAGATTGCTCACTAGCAGTAAGGTGAATATTGCTCGCTAACAAGAAGCTGAATATGGCTCAGTAACAGACTATTAACAGTTAAGGTGAAAAATTTAGAGAACTGTTGCTTTTCTGTTCCAATATCATCTCTTGAACACTGGTTTTCTAGTCCCAATATTATTCTTGTTGTTCTTGGCATCATCGTCAGTACAGACTACACAGTGTTAGTGTTTAGCACCATTTTCACCAACTTAAGCTTACTATGGATGGTTGCCATGAATTGACACAGGATCTCCTGAAGTTGGAAGCTATCCAAAAGGAGCTTGCTCACTACAACGGCGGTGAACCAACCTTCTCACAGTGGGCAGAAGCAGCTGGAACTGACGAGAACACTTTGCGAAAACGTCTGAACTATGGAATTTCCTGCAAGAACACGATGGTAAAGTCTAACGTGAGACTTGTAATCTCAATTGCTAGAGAGTTTGAAGGTCCTGGAATGGAATTTTCTGATCTTATTCAGGTATTTTGCTTGCCCTTTTCTACAGTTAAGTATAGCCCTTCTATGATTATGCTTATGACTCACATTTCTTTCTGTAACTTTTGTAGGAAGGAATACAGGGCCTTGTACGAGGCGCTGAAAAGTTTGATGCTTCAAAGGGTTTTCGATTCTCCACATACTCTCACTGGTGGATCAAACAAGCAATACGCAAATCCGTTTTAGAACAAACCCAGATTATTCGCTTGCCGGTATGTTCACTTCCGCATTGTACTTTTGGTCATTTCATAGTGCCATCTTTTTCATCCATCATTACTAGATCAAGTAGTTGGTTTTGATGTCTGCACATTGGTGAACGGTGATTGATGGGAATGGCTACAATCACTGACATGCAATAGTTAAGTGGATAGTTGATACTGTTATATTTCATTTAACACATTGATTTTCATTTGCATCATGGAACAAGTGCTCAACCGAACAACACAAACCAAGCAACGATTATAACATAATGATTTTTCACTCGTGCGTCTTTCCTCATGAACCATCTACCGCTGTTTTTGACGGTTGCTGCGTTGCTATCTTACACCAGAAAGGCTTCTTATGAATTATGATGCTCTGCTTGTAGGCACACATGGCCGAAGCAAGTTCCCGGGTGAAGGAATGCCGACGGCGGCTCCGCCGGCAGCTGAAGAGGCTACCCACCAACGAAGAGATCGCATCCGACACCGGCATGCCGCTCAGGCGCGTCGAGGCGGCGATGAGCCTCCCAAAATACACCGTTTCCCTCACCAGCAAGGTCGGGTGCACTGACATGACATACCAGGTGAGTCTGCTCCCTTCGCCCGAGCAACATGAACACATCACAAAACCTCGACCTCATCCATGGCCAATTACTGAATCCAAGTGATCACCGCATACATCGCAGGAGATCACGCCGGACACGAGCACGGAGACGGCGGAGGAGATGCTGCACCGGTGGCTGATGAAGGAAGACGTGGACAGGGCGCTGGACGGGCTGAGCCCGCGGGAGAGGCAGGTGATCAGGTACAGGTTCGGGATGGACGACGGCCGGCTGCGGACGCTGCACGACATCGGTCGGCTGATGGGGGTGAGCAGGGAGAGGATCCGGCAGATCGAGCTGGTCGCGTTCCGGAAGCTCAGGGGCAGGAAGAAGGTTCAGTCGCTGCAGCATTATCTGCAGCCTGTGGAGAGCTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012312