BGIOSGA012313

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Revision as of 09:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012313| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012313, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012313

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012313, complete gene.

LocusTag

OS03G0271200

Ensembl Transcript ID

BGIOSGA012313-TA

Ensembl Protein ID

BGIOSGA012313-PA

Length

4942

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9719766..9724707

Sequence Coding Region

9719766..9720950,9721371..9721592,9721708..9721815,9722765..9722959,9723062..9723310
,9723682..9723936,9724468..9724707

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9719766..9724707 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9719766..9724707 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCACCTCCCAGAGCCTCTTCTTCTCCCCGCTGGCCGCCGGCCCATCCCGGAGAGTCCGGGGGCGGGGCCGCTCCACCTCCGTGTCAGCCGCCGCCTCCGCCTCGTCGCACAACTCGCAGCCCCACGGCCACCCCCAACAACCCCTCGCCGTCGCGTCGTCCAGCTCCAAATCCGAATCTAAGGGCTCGAAAACCTTCGCCCTCGCCTCCGCCATCACTGCCGCCGCCTCTGGTGCATTCCTTCTCGCGTCATCTGGTGGCGGGTTCGGGGGCGGCGCCGGGGGTCCTCTCGGCGGTGGAGGCGGTGGATGGGGCGCCGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGGCGGCGGCGGGTTCTGGTCGCGGATCTTCTCCGGCGGCGCGGCGCACGCGGATGAGAAGTCGTCGGGGGATTGGGACCCGCACGGGCTCCCGGCAAACATCAACGTGCCGCTGACGAAGCTGAGCGGGCTGAAGAGGTACAAGATCTCCGAGCTCAAGTTCTTCGACCGCGCCGCGGGAGGGGGAGGCGCGTTCACGGGACCCGAGGATTCCTTCTTCGAGATGGTGACGCTGCAGCCCGGCGGCGTGTACACCAAGTCGCAGCTTCTGAAGGAGCTCGAGACGCTCGTGTCCTGTGGCATGTTCGAGAGGGTCGACCTCGAGGGGAAGGCCAAGCCCGATGGCACCCTTGGCCTCACCGTGTCCTTTGTCGAGAGCGTGTGGAGCGCTGCTAAGCAGTTCAAGTGCATCAATGTGGGGCTAATGTCGCAGTCGGGCCAGGTTGACTTCGACCAGGACATGACAGAGAGGGAGAAGATGGATTACCTCCGGAAGCAGGAGCGTGATTACCAGCAGCGTGTTCGTGGTGCCAAGCCGTGCATATTGCCAGATAACGTGCGTGGGGAGGTGCTAGGAATGATGAAGAAGCAGGAGAAGGTGAGCGCTAGGCTCCTGCAGAGGATCAGGGACCATGTCCAGAAATGGTACCACAATGAGGGGTTCGTCTGCGCCCAGGTGGTGAACTTTGGAAACCTAAACACCAGTGAGGTTGTTTGCGAGGTGGTCGAGGGGGATATAACCAAAGTGGAGTACCAGTTCCAGGATAAGCTTGGAAATTTTGTTGAGGGGAATACCCAAATTCCTATCATAGACAGGGAGCTCCCACAGCAGCTTCGACCTGGCCATATCTTTAACATTGGAGCAGGGAAGCAAGCTCTGAAGAATATAAATTCACTTGCTTTATTCTCCAATATAGAGGTGAATCCACGCCCTGATGAAACAAAAGAAGGGGGCATTGTGGTTGAAATCAAGCTTAAAGAATTAGAACCGAAGTCAGCTGAAGTAAGTACAGAGTGGAGCATCGTACCTGGACGTGAAGGCCGACCAACTCTGGCATCCATTCAACCTGGAGGAACTGTGTCATTTGAGCACCGGAACATCTATGGTCTAAACAGATCCATTGTTGGTTCTGTTACATCCAGCAACCTGCTCAACCCTCAGGATGATCTCTCATTCAAGCTTGAGTATGTTCATCCTTATCTGGATGGTGTGGATGACCGTAATAAAAACCGCACCTTCAAAACTAGCTGCTTCAATACCAGGAAATTGAGTCCTGTCTTTGTTGCTGGCCCCAATATGGATGAAGCTCCACCTGTTTGGGTTGACAGAGTTGGATTCAAAGCCAACATAACAGAGAGCTTCACACGTCAGAGCAAATTCACATATGGCCTTGTGGTAGAGGAGATTACAACGCGTGATGAAACCAACAGCATCTGCACTCATGGTTCTCGAGCAATGCCTAGTGGTGGCCTGAGTATGGATGGACCTCCCACAACCCTCAGTGGTACTGGCATAGATCGGATGGCTTTTCTGCAAGCAAATATAACTAGAGACAATACAGAATTTGTAAATGGTGCAGTTATTGGCGACAGATGTATTTTCCAGTTGGATCAAGGTCTTGGCATTGGAAGCAAAAACCCATTCTTCAACCGTCACCAACTTACTTTGACAAAGTTTGTTAATTTAAACAAGCAGGAGAAAGGTGCTGGCAAGCCACTTCCAGCTGTTTTGGTTCTTCATGGTCATTATGCAGGTTGTGTAGGAGATCTGCCAAGCTATGATGCATTTACACTTGGAGGACCTTACTCAGTTAGGGGCTATGGTATGGGTGAACTGGGTGCTTCCAGGAATGTTCTTGAGGTTGCGAGTGAGTTGCGTATTCCTGTGAGGAACACATATGTGTATGGATTTGTTGAACATGGCACTGACCTTGGCAGTTCCAAGGATGTGAAAGGGAACCCCACAGAGTTCTTCCGACGGGTTGGTCATGGGTCATCATATGGTCTTGGCGTCAAGCTTGGCTTGGTAAGGGGAGAGTACATCGTAGATCACAATGCTGGTACTGGAACAGTTTTCTTCAGATTTGGCGAGAGATTTTGA</cdnaseq>

Protein Sequence

<aaseq>MALTSQSLFFSPLAAGPSRRVRGRGRSTSVSAAASASSHNSQPHGHPQQPLAVASSSSKSESKGSKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGAGGGGGGGGGGGGGGFWSRIFSGGAAHADEKSSGDWDPHGLPANINVPLTKLSGLKRYKISELKFFDRAAGGGGAFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVSFVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCILPDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVVEGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF</aaseq>

Gene Sequence

<dnaseqindica>1..1185#1606..1827#1943..2050#3000..3194#3297..3545#3917..4171#4703..4942#ATGGCGCTCACCTCCCAGAGCCTCTTCTTCTCCCCGCTGGCCGCCGGCCCATCCCGGAGAGTCCGGGGGCGGGGCCGCTCCACCTCCGTGTCAGCCGCCGCCTCCGCCTCGTCGCACAACTCGCAGCCCCACGGCCACCCCCAACAACCCCTCGCCGTCGCGTCGTCCAGCTCCAAATCCGAATCTAAGGGCTCGAAAACCTTCGCCCTCGCCTCCGCCATCACTGCCGCCGCCTCTGGTGCATTCCTTCTCGCGTCATCTGGTGGCGGGTTCGGGGGCGGCGCCGGGGGTCCTCTCGGCGGTGGAGGCGGTGGATGGGGCGCCGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGGCGGCGGCGGGTTCTGGTCGCGGATCTTCTCCGGCGGCGCGGCGCACGCGGATGAGAAGTCGTCGGGGGATTGGGACCCGCACGGGCTCCCGGCAAACATCAACGTGCCGCTGACGAAGCTGAGCGGGCTGAAGAGGTACAAGATCTCCGAGCTCAAGTTCTTCGACCGCGCCGCGGGAGGGGGAGGCGCGTTCACGGGACCCGAGGATTCCTTCTTCGAGATGGTGACGCTGCAGCCCGGCGGCGTGTACACCAAGTCGCAGCTTCTGAAGGAGCTCGAGACGCTCGTGTCCTGTGGCATGTTCGAGAGGGTCGACCTCGAGGGGAAGGCCAAGCCCGATGGCACCCTTGGCCTCACCGTGTCCTTTGTCGAGAGCGTGTGGAGCGCTGCTAAGCAGTTCAAGTGCATCAATGTGGGGCTAATGTCGCAGTCGGGCCAGGTTGACTTCGACCAGGACATGACAGAGAGGGAGAAGATGGATTACCTCCGGAAGCAGGAGCGTGATTACCAGCAGCGTGTTCGTGGTGCCAAGCCGTGCATATTGCCAGATAACGTGCGTGGGGAGGTGCTAGGAATGATGAAGAAGCAGGAGAAGGTGAGCGCTAGGCTCCTGCAGAGGATCAGGGACCATGTCCAGAAATGGTACCACAATGAGGGGTTCGTCTGCGCCCAGGTGGTGAACTTTGGAAACCTAAACACCAGTGAGGTTGTTTGCGAGGTGGTCGAGGGGGATATAACCAAAGTGGAGTACCAGTTCCAGGATAAGCTTGGAAATTTTGTTGAGGGGAATACCCAAATTCCTATCATAGACAGGGAGCTCCCACAGCAGGTATACCAAATACCGCTAGCTGCTATAGTTAATACGAGAATATAATTTTGTTCCCATCTTTGAATTTTCTTAGTGATTCATATAACTAGATCATGTGTTTAGGAAGGTATAAGCGATAATTTGAATACCCTGCCACATAGTGATTACTTTGGATTCTGGTTGTAGCACGGAATTCTTTTAGTGCCACTATACAATTTTATCGCCATGTTGATTCTAGAAAAGCAGTAGCATGTACCCCTTTCATGACATGTGGGATGATTTTGTGCCATGAAAAAGCCTGAAGTTAAACGTTTACTACATACTTCTTGCCACTGTTAGTGATTAGTTGCACATATGTGGGTCTTGAAGAAAAAAGTATGTTTCTTATTCTGAATGTGATATATTAGTGTTTTCAGTAACTTGTACCTCTGTATCCTGCAGCTTCGACCTGGCCATATCTTTAACATTGGAGCAGGGAAGCAAGCTCTGAAGAATATAAATTCACTTGCTTTATTCTCCAATATAGAGGTGAATCCACGCCCTGATGAAACAAAAGAAGGGGGCATTGTGGTTGAAATCAAGCTTAAAGAATTAGAACCGAAGTCAGCTGAAGTAAGTACAGAGTGGAGCATCGTACCTGGACGTGAAGGCCGACCAACTCTGGTAATTTGCCTACTGTGGAGCCAACATTTTATTCTTCTCTAATCTTTATTTTAACAACACCGTTCCAATCCATCCCTACCAACACGTATGACGTATCTGATGGCAATTATTTTAGGCATCCATTCAACCTGGAGGAACTGTGTCATTTGAGCACCGGAACATCTATGGTCTAAACAGATCCATTGTTGGTTCTGTTACATCCAGCAACCTGCTCAACCCTCAGGTCAGATCGTGATTAATGTTCTCTTCACTTGGTTATCTTTTTTTTTCTTTTTGTTACTGTTAGATAAACATAATTTTTGTAGGTTTAGACAAGTGTTATGGTGTTATCAGTTGTAAGAGGGACAATATTGGTCCGTGCTGGTTTGATTACTTCATATGAAAACTTGAATGTCTACTTTTGAAACCGTCTACATAACCTCCTCAAAGAACTGTTTTTAATTGACAACCATGTCTTGCATCAAATGTTGAACTTGGAAATTTTCTGTTCTAATCAACCTTCATGTAACTGTGGTCATTAATTGCTACTTCTCCGTTCCAAAATATAACTTCCTAGAGTTAATTTTGTCCCAAATATAGATGCTACCTAGTACTTGTAAAGGGTGAGTTTTTCCACTAAAATACCCCTTCTACCCATTCTACCCCTTTGCTTTATTATAGCCTCAACCTAACCTATAGCTGACCCATCCCAAGAAGGCAACCAAGTCTTTTTACCCCTCCTTCATACCCGTGCTGAAGGCTATATTTTGGGATGGTGGGAGTACCTTACTACAACCCCTTCCACATTATAAGACATTTTCGGTTTGCTTAAGTCAAACTTTTTCAAGTTTGACCAAGTGTATAGAAAAAAAAACATAGCAACATCTACAACACCAAATTATAGTTTCATTAAATCCACCATTCAATATATTTGCATAGTATATTTGACTTGTGTTGAAAATCTTGCTACACTTCTTTACAAACTCGATCAAACTTAGGACAAACCCGAAACGTCTTATAGTATGGAACAGAGGGAGTACTGTATGTTTGTGAGCATCATTTTGAAACATTGACTTGTTTCATTCCTGGTGATTATTCTATGTGTATTTTAGATGATCTAGCAATCTAGTGTATGCCTTATAGTACTTATGATTTCTGATATTCCATATGTGTATGCCTTTTTGGGTTTTCAGGATGATCTCTCATTCAAGCTTGAGTATGTTCATCCTTATCTGGATGGTGTGGATGACCGTAATAAAAACCGCACCTTCAAAACTAGCTGCTTCAATACCAGGAAATTGAGTCCTGTCTTTGTTGCTGGCCCCAATATGGATGAAGCTCCACCTGTTTGGGTTGACAGAGTTGGATTCAAAGCCAACATAACAGAGGTTTGCACAGATTTATATGATCTTTTGCATCTTTTATTATGCATTAGCTGCCTTCTCCAATAATCATCTATAATAACATGAGGAAACTGCTCTTGGTTTCAGAGCTTCACACGTCAGAGCAAATTCACATATGGCCTTGTGGTAGAGGAGATTACAACGCGTGATGAAACCAACAGCATCTGCACTCATGGTTCTCGAGCAATGCCTAGTGGTGGCCTGAGTATGGATGGACCTCCCACAACCCTCAGTGGTACTGGCATAGATCGGATGGCTTTTCTGCAAGCAAATATAACTAGAGACAATACAGAATTTGTAAATGGTGCAGTTATTGGCGACAGATGTATTTTCCAGGTATGCTCTGTGCCCTTGTGATTCCAGGAATACATACTAAACCTTCAGTTATTGGCAAGTAGTTAGGAATAATATTCAGTCATACACTTAGTTGTGTGGAATTTTGGAAAAGATCAACTACCGAGGCAGACCTTTGGTACTATTGATATGTCAGTTTGATACTTTCATACATTGCATAAAATGAGGGTTCAATGTTCGGAAAATATTCAGACACAGTTTAGTGACAACTTGTGATATTAACCCTTTTGGTCATCGAATTCAACTATTTCTGCCAATATTTCAATTGCTTTGTAAATCGTTTCTGTATGTTTGTGCAAATTAGTGTTTAATGTAAATCCTTTCATATGTTTTTTTTTTTTGGCTGGCTGCAGTTGGATCAAGGTCTTGGCATTGGAAGCAAAAACCCATTCTTCAACCGTCACCAACTTACTTTGACAAAGTTTGTTAATTTAAACAAGCAGGAGAAAGGTGCTGGCAAGCCACTTCCAGCTGTTTTGGTTCTTCATGGTCATTATGCAGGTTGTGTAGGAGATCTGCCAAGCTATGATGCATTTACACTTGGAGGACCTTACTCAGTTAGGGGCTATGGTATGGGTGAACTGGGTGCTTCCAGGAATGTTCTTGAGGTGAGTGTTATTAGGGAATTTGCAATATATTATGATACCCCTACTTTCCTTCTTAGTTAGAAGAGTAAACTTCATAAAACTATAGATACTTTGACAAAACCATCACAAAACTACAGATTTAACACAGAATTTCTCATAGAATTATAGATTTAACACAATTTCTTATAGAACTACAGATTTAAGATGGAGTGTCAAAAAATAAATATTAAGTAGCAAATATTTCACAAAACTACAGGTTTAGTGTCAATTTAATCACAAAACTACAACGTTTACAGCTCTAAGATAACGGTAGTGCTAGGGATTCAAACTCTAGAATCTATAGTTTTGTGATAACTTCAATATTAAATCTGTAGTTTTGTGATAAATTTGTTGCTAAATTTGTAGTTTTGTGATACAATGTCTTAAATTTACTCTATTTTAGAATTATAAAACAAAGAACTACTAGATATAATTGATGCCAGTACCATGGCTACTTGCAACATATAGTGATCCTTGCTTTGTTGGTGACTTATGTATCTTTTAATCCTGCAGGTTGCGAGTGAGTTGCGTATTCCTGTGAGGAACACATATGTGTATGGATTTGTTGAACATGGCACTGACCTTGGCAGTTCCAAGGATGTGAAAGGGAACCCCACAGAGTTCTTCCGACGGGTTGGTCATGGGTCATCATATGGTCTTGGCGTCAAGCTTGGCTTGGTAAGGGGAGAGTACATCGTAGATCACAATGCTGGTACTGGAACAGTTTTCTTCAGATTTGGCGAGAGATTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012313