BGIOSGA012326

From RiceWiki
Revision as of 09:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012326| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012326, complete gene.| tag = OsI_109...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012326

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012326, complete gene.

LocusTag

OsI_10944

Ensembl Transcript ID

BGIOSGA012326-TA

Ensembl Protein ID

BGIOSGA012326-PA

Length

5069

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9919809..9924877

Sequence Coding Region

9919809..9919902,9921366..9921553,9921658..9922489,9922604..9922783,9922866..9922925
,9923017..9923096,9923219..9923463,9923548..9923871,9923944..9924007
,9924701..9924877

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9919809..9924877 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9919809..9924877 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAACAACAGAAGCAACTAATTAAAGAAGACACAATGGACAACAACATCGACAAATTAACTCCCAACTGGTGTGCCTGGAAAAACGACAACAATTTGTGCTCCGGGACAAGCCATGAGCAGCGCAACCACCGGTTGTTAACCAAGCAACCCCCCTGTAAATTGAAAGCAACCGAAGCGAAGCGCAAAGAAATGGTTTTTCAGAAGAGGTCATCGCTGGAGATGGAGTCGGGAGGCGGAAGCCACGTCGCGGAGATGCCGCGCGTCCCCAAGTCCGCGAGGGGCAAGAGATCAATTCGGAAGAAGGAGAGCCAGGGTCAGGTGATGTGCGCGTTCGACCTGCTCGCGACTGTGGCCGGAAAGCTGCTTGATGAGGGGGAGGGTTCTCTGGGGAATGCGTCGCCCAAGGATGTCCGCGTGAAGCAGGAGCAGTGCGATGAGGAGGCGAAGCATTTCAAGAATGAGGTGATGGATCAGGATAGCTGCAATGAGAGTGCATTGGTCTCCCACATTGCGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGAAGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGACAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGATCGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGCAATAGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCTGCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAAGGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTGCACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGCTGGTCATAGTAGGGTAAAGAAGTTGCTCGCCTGTAAGCACAGGAAAGTTGCTCCAGCCAGGATGCACAAAGGAGATCTTTCCTATAGTGATGTTGACCGGAAGCCTTCTTTCCGCAACAAGAAAATGTATTATACACGACAAAGGACACAAAGGAGCACATTCAAGCGGAGGAAGATGTTTGATCGTCATTCAGCCCAAGTTTCTGAAGAATATGCAAAGGCAAACACAAAGTTTGCTGCAAGAGACTCGCACGCGGTTTCTTTGGAAGCAAACAAGGGGACCAATTCAACAGCATTCCAGAAATCACAAGAGTCAAGTGACTGCCACGTAAAACTTAGGATCAAGTCTTTCAAGGTGCCTGAACTTCTAATTGAGATCCCAGAAACTGCGACTGTTGGTTCACTGAAGAAAACTGTTCTGGAGGCAGTAAATGCCATACTTGGAGGTGGTCTGCGTGTCGGTGTGCTCCATCATGGGAAGAAAGTCAGAGATGATAATAAAACCTTAATGCAGGCTGGGATTTCTCATGATGAGGTACTGGACAACCTGGGTTTTTCTCTTGAACCCAATTGTGCACCGCATCCGTCACAACTCTCACCTCCCGAAGATAATGAATTCATGGAAACTGTTGATACTACTGAACCCCTAGCTAGGATTGCACCTGCTGACTCATCTTCCAAGCATGGTGAAGTTGATGCTTCACAGGAGCTTGCATTGGCACCCTTATCAGCAAACTACCAAGGGAGTGATCATGACTTTGTGCACTCTCCTGGGGGCATGTCTTCACCTGATAAGGCATCCACAAACTCGCGAGCTATTGTTCCAGTTACTCCTGCAGATTCCAATGCTGGGGCTATAGTTCCAGCAAACAAAGCAAAGAGGTCACCTGAACAAGGGCAACGCCGAATCAGGCGTCCGTTCTCTGTTGCCGAAGTGGAAGCCCTTGTGCTTGCAGTTGAAAAGCTTGGAACCGGAAGATGGCGAGATGTCAAACTTCGGGCCTTTGATAATGCAAAGCACCGGACTTACGTTGATCTTAAGGACAAATGGAAGACGCTCGTGCACACGGCGAGCATCTCGCCCCAGCAGCGGCGTGGCGAGCCGGTGCCACAGGAGCTGCTCGACAGGGTCCTGGCGGCTCAGGCCTATTGGTCTCAGCAGCAAGCCAAGCTCCAGCCTAAGACGCCCCCGCTGGCTGAGGCTCTCCTGCTCACCTAA</cdnaseq>

Protein Sequence

<aaseq>MKQQKQLIKEDTMDNNIDKLTPNWCAWKNDNNLCSGTSHEQRNHRLLTKQPPCKLKATEAKRKEMVFQKRSSLEMESGGGSHVAEMPRVPKSARGKRSIRKKESQGQVMCAFDLLATVAGKLLDEGEGSLGNASPKDVRVKQEQCDEEAKHFKNEVMDQDSCNESALVSHIAFQRPVNHHGRKGEDPEGSHAVIEDPKAKSEALDKESSMISCTKAELGCNFAAIADRWSPESVESGAFTGDAAAIAMPATTSGFHKNAPDMYNLLDPMDVDVKPPPLVSSDSTGEMPLYGNKIRRSTSFPRVPKGGAGFTVDRDEDDDDKSSGCTHPSTATNRGFRPNCTAGHSRVKKLLACKHRKVAPARMHKGDLSYSDVDRKPSFRNKKMYYTRQRTQRSTFKRRKMFDRHSAQVSEEYAKANTKFAARDSHAVSLEANKGTNSTAFQKSQESSDCHVKLRIKSFKVPELLIEIPETATVGSLKKTVLEAVNAILGGGLRVGVLHHGKKVRDDNKTLMQAGISHDEVLDNLGFSLEPNCAPHPSQLSPPEDNEFMETVDTTEPLARIAPADSSSKHGEVDASQELALAPLSANYQGSDHDFVHSPGGMSSPDKASTNSRAIVPVTPADSNAGAIVPANKAKRSPEQGQRRIRRPFSVAEVEALVLAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTASISPQQRRGEPVPQELLDRVLAAQAYWSQQQAKLQPKTPPLAEALLLT</aaseq>

Gene Sequence

<dnaseqindica>1..94#1558..1745#1850..2681#2796..2975#3058..3117#3209..3288#3411..3655#3740..4063#4136..4199#4893..5069#ATGAAACAACAGAAGCAACTAATTAAAGAAGACACAATGGACAACAACATCGACAAATTAACTCCCAACTGGTGTGCCTGGAAAAACGACAACAGTACGTACGTCAATGGAGCTTTGTATTTATAAAATGCTCTCCAGAGAAACAGAGGAGAAGAAGAATCTACGTTGATTTCCTGGGTTTGAATCTCCCGGTCCAAGTTGAGAATTCGATAACTTCGGAAAGCTTTCCAGAGGAGGGAGAGGACTCGCCGTCGCCGGGAACATTGTTTAGGCCATGTTTTTGCTTAGGTCAACTCTCGCATCCATCCATCCAACAAGCCTAGTGTTGAGACCTATGCTAGCGTAAAAGAGAGCGTAGAAATTTATTTGAGCAAGTGGCAATAAAAAGGCCGCATCGAGACATGACCCGTGTCTATGTGCTAGATATCCGATCGACGATGTATATAGTTTGGCTTTTGAGTGAAGGAGTTTGCACGTTTTTCTCGTCAATTTTAATGGCTGTCCAAGTGCGTATTCTAGCTTGCGGGGTAATTAAGCAATTTTAATCTTTGTGCTGTTAATCTAAAGAAGAATCATATCATTCTCCATGTACTTGTACTGCTAATACTGATGTACACGTAAAATTCACATTTGTATCGAAAATCATATTACCTCTGGTTATAAATATTTGATGTTTAGAATAAAATTTGATTAAACTTTTAAACTTTAACTATGATTTTTTATATTAGATTGAGTTTATAAAAATTAATGAGTTTGTGATATTATGATAGCACTGGTCAAGGCAAATCTATAAATATTACTCCTACTTGACATTTTCTTAACATTTAGGGCAGATTCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTGGCGCTGCAGAGGTCCGCCAATTCTTGGTTTGTTCTGCGCCTGTGGGGTTTGTACTTCTTCCCCCCCCCCCCCCCCTCTCTCTTTTTTTTTAACCGACGGGCTCGCTTTCCTTTTGGCAGTTGCTTAATCCTCACGGATTCCGATGCATGTGAGTTTTTTAAAGCCTTTTTCCCCTTCTCTCTTTGATCGCTTGGCGTGCTGGTTTACCTGGCGAATTTATTTTTCTTTGGATGCATTTAATACGGCTGGGGGAATCCATTTCCTCCCCCAAAACCCAATTCCTTTTCTTCTCTTAATTTGGATCACGGGTGGTGTACGAATTCTTCCCGTTTGCTTCGTTCTTCAGGTTTTGATTTGATGCAATTAATTCGCTCTTTTGATATGCTTTCGAGCGCTGGTGATTTGAAATTCTAATTCGTTTCGGGCGCCCAAGCCCGGATCTCCAGTCCAGGGTTTTTTGGGATTCTCAATTTTTTTGCTAATTAATTGCACTGTTAACCACTATCGTTCTCTGTTTAATTAATCTCGGAAGGGTTTATCCGAGATTTATCCCAAAGTTCTTCTTGCGGAGATCCCAATGAAATGATTTCCTTCCTTCTTTGTACCAACTGGTTTCCTTCTTGCCAATTGCTGATGTGGTTTTCAACAATTCCTGCGCAGATTTGTGCTCCGGGACAAGCCATGAGCAGCGCAACCACCGGTTGTTAACCAAGCAACCCCCCTGTAAATTGAAAGCAACCGAAGCGAAGCGCAAAGAAATGGTTTTTCAGAAGAGGTCATCGCTGGAGATGGAGTCGGGAGGCGGAAGCCACGTCGCGGAGATGCCGCGCGTCCCCAAGTCCGCGAGGGTATGGGGCTTCTCACCGGCATCATCAAAATTCGACACCTTGCTGCTCCGGTTGGCGAGCCCTGACAGCGATGGCGTTTCTTCTTGTTTGGTGAAATTGTGCAGGGCAAGAGATCAATTCGGAAGAAGGAGAGCCAGGGTCAGGTGATGTGCGCGTTCGACCTGCTCGCGACTGTGGCCGGAAAGCTGCTTGATGAGGGGGAGGGTTCTCTGGGGAATGCGTCGCCCAAGGATGTCCGCGTGAAGCAGGAGCAGTGCGATGAGGAGGCGAAGCATTTCAAGAATGAGGTGATGGATCAGGATAGCTGCAATGAGAGTGCATTGGTCTCCCACATTGCGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGAAGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGACAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGATCGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGCAATAGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCTGCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAAGGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTGCACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGCTGGTCATAGTAGGGTAAAGAAGTTGCTCGCCTGTAAGCACAGGAAAGTTGCTCCAGCCAGGATGCACAAAGGAGATCTTTCCTATAGTGGTGAGCATTGTGAGATCCCATTCACCTTTTCCTTTTTTGAGGAGCACTGCATTGATGGCACTCATATTCAAACCTGCTTACTCTATTCTTACTTGAGTTCGTTGATCCTGCTAGATGTTGACCGGAAGCCTTCTTTCCGCAACAAGAAAATGTATTATACACGACAAAGGACACAAAGGAGCACATTCAAGCGGAGGAAGATGTTTGATCGTCATTCAGCCCAAGTTTCTGAAGAATATGCAAAGGCAAACACAAAGTTTGCTGCAAGAGACTCGCACGCGGTTTCTTTGGAAGGTTTGTTTTGCTTGAACCTGTGAATTCTTCTTCGTGCAGCTGCCCCATCTTTTAACATACTGGGGCAATATTTCTTCTGCAGCAAACAAGGGGACCAATTCAACAGCATTCCAGAAATCACAAGAGTCAAGTGACTGCCACGGTAAGTTTGGCCCCATGAAAAATGTTTTTGATATTGTAATTATTTTGGTTTTATGGCCATAGTCTAAGACTGCTTGTTTTTCTCCTTGCAGTAAAACTTAGGATCAAGTCTTTCAAGGTGCCTGAACTTCTAATTGAGATCCCAGAAACTGCGACTGTTGGTTCACTGAAGGTACGGAAAAAGAGACATTTTGCTCCTGTTTTCTCATTAATTGATCAGCACAAAGAGATGTTGCAAGAATTTCACCTTTTGTCGATGATGTTTCCGTGTTTTAATATGTATTTATAATGCAGAAAACTGTTCTGGAGGCAGTAAATGCCATACTTGGAGGTGGTCTGCGTGTCGGTGTGCTCCATCATGGGAAGAAAGTCAGAGATGATAATAAAACCTTAATGCAGGCTGGGATTTCTCATGATGAGGTACTGGACAACCTGGGTTTTTCTCTTGAACCCAATTGTGCACCGCATCCGTCACAACTCTCACCTCCCGAAGATAATGAATTCATGGAAACTGTTGATACTACTGAACCCCTAGCTAGGTAATGAATATTCTCCATAAGAAATCATTGTAAAACTCGAATGTGTGTAGCCTAACCCAGCCTTATGTATTTCGCTGGATACAGGATTGCACCTGCTGACTCATCTTCCAAGCATGGTGAAGTTGATGCTTCACAGGAGCTTGCATTGGCACCCTTATCAGCAAACTACCAAGGGAGTGATCATGACTTTGTGCACTCTCCTGGGGGCATGTCTTCACCTGATAAGGCATCCACAAACTCGCGAGCTATTGTTCCAGTTACTCCTGCAGATTCCAATGCTGGGGCTATAGTTCCAGCAAACAAAGCAAAGAGGTCACCTGAACAAGGGCAACGCCGAATCAGGCGTCCGTTCTCTGTTGCCGAAGTGGAAGCCCTTGTGCTTGCAGTTGAAAAGCTTGGAACCGGAAGGTATGCTGCTTACTTCACTCATTTGACCTTACATTTTCATAATTTCTGTTTCTTACTGTATTTCTGTTTCAGATGGCGAGATGTCAAACTTCGGGCCTTTGATAATGCAAAGCACCGGACTTACGTTGATCTTAAGGTAATTATTATTGTGATACCTGTCAAATGCCTTACAAGCTTTTTCATGTCTAGTTAAAGCAAATACCTTGGCATTGCACATGTTTGCAAAATATGATCATCACTTTCCTTTAAAGGTGGTCATACTTATCATTATTTCTGATCCATTTATCAATTCCCATGATTTTTCCTTCTGTTTGTGCCAAGCTTTTAGTTCTTGTCACAATTGACTTACATCTTGGGCTTTAGGCAAATTTTGTAGCGTGTTGCTAGGCTGATTTAACAAACTGTTCGGTGCTTCTGGGTTTTAGGTTCCTTACGCAGTATGGCAGTCTAACCGTACTGTTTTTGTGTTAGTAGCACATTTCAGTCAGGCTCTTGTTCTGGAAAACTTTTTGTCGTTATGATTCAGTTAGTCCTGTCCTCACGCATCAGCTTTGTTGTTTGGACGGGCCAAGTGGGTAGTAGTACCAGAATGGTTCACCTAGAAAATAAAAGCTACCTATTCTTGCACGTCAACTAACTCGGTCCTGGCTTTAGAAAAAGTCTCACCAAGGGATCAGATAACCTTTCCTTTACTAGAGTGGAAGCTTCTTGCTGCTTTGCATTTAGGCAAATTGACTGAAAATGCATGCGTTCTCTGGTCAAACTCAATGAAAGATTATTAAGTTTGAACTTGCATTTACTAACCGTGTCAAAATTGTCATGCCAACAGGACAAATGGAAGACGCTCGTGCACACGGCGAGCATCTCGCCCCAGCAGCGGCGTGGCGAGCCGGTGCCACAGGAGCTGCTCGACAGGGTCCTGGCGGCTCAGGCCTATTGGTCTCAGCAGCAAGCCAAGCTCCAGCCTAAGACGCCCCCGCTGGCTGAGGCTCTCCTGCTCACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012326